Evidence Based Medicine on FHIR Implementation Guide
1.0.0-ballot - ballot International flag

Evidence Based Medicine on FHIR Implementation Guide, published by HL7 International / Clinical Decision Support. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/ebm/ and changes regularly. See the Directory of published versions

Artifacts Summary

This page provides a list of the FHIR artifacts defined as part of this implementation guide.

Structures: Resource Profiles

These define constraints on FHIR resources for systems conforming to this implementation guide.

Adaptation

Profile of ArtifactAssessment for Evidence Based Medicine IG. The Adaptation Profile is used for assessments of a knowledge artifact that are used to create a new knowledge artifact through acceptance, rejection or modification of the assessed artifact.

BaselineMeasureEvidence

Profile of Evidence for Evidence Based Medicine IG. The BaselineMeasureEvidence Profile is used for evidence with a measured variable (with the role of outcome for this Evidence) that is considered an independent variable with respect to the outcome of an exposure or intervention in a study.

BaselineMeasureReport

Profile of Composition for Evidence Based Medicine IG. The BaselineMeasureReport Profile is used for an evidence report including the findings for any number of baseline measures in a research study.

BookCitation

Profile of Citation for Evidence Based Medicine IG. The BookCitation Profile is used for citations of a book.

BookPartCitation

Profile of Citation for Evidence Based Medicine IG. The BookPartCitation Profile is used for citations of a part of a book.

CertaintyOfEvidence

Profile of ArtifactAssessment for Evidence Based Medicine IG. The CertaintyOfEvidence Profile is used for expression of the certainty (also called quality or confidence in the estimates) of an Evidence artifact.

Classification

Profile of ArtifactAssessment for Evidence Based Medicine IG. The Classification Profile is used for classifier tags that may be created independently from Resource creators and may be used for search indexes.

CohortDefinition

Profile of Group for Evidence Based Medicine IG. The CohortDefinition Profile is used to provide a conceptual or definitional representation of a Group. In R6, membership = conceptual allows avoiding the required use of type. In R5, membership will be definitional and type value can be ignored for resource content processing.

Comment

Profile of ArtifactAssessment for Evidence Based Medicine IG. The Comment Profile is used for comments about a Resource that may be created independently from Resource creators.

ComparativeBaselineMeasureEvidence

Profile of Evidence for Evidence Based Medicine IG. The ComparativeBaselineMeasureEvidence Profile is used for comparative evidence with a measured variable (with the role of outcome for this Evidence) that is considered an independent variable with respect to the outcome of an exposure or intervention in a study.

ComparativeEvidence

Profile of Evidence for Evidence Based Medicine IG. The ComparativeEvidence Profile is used for evidence with a measured variable that is considered the outcome of an exposure or intervention, and an exposure variable with two or more categories that are being compared.

ComparativeEvidenceReport

Profile of Composition for Evidence Based Medicine IG. The ComparativeEvidenceReport Profile is used for an evidence report including the study group, exposure, comparator, and findings for any number of outcomes comparing the exposure to the comparator in the study group.

ComparativeEvidenceReportSubject

Profile of Group for Evidence Based Medicine IG. The EvidenceReportSubject Profile is used to define the subject of an EvidenceReport.

ComparativeParticipantFlow

Profile of Evidence for Evidence Based Medicine IG. The ComparativeParticipantFlow Profile is used for comparisons of counts of completion and reasons for non-completion of participation in a research study.

ComparatorDefinition

Profile of Group for Evidence Based Medicine IG. The ComparatorDefinition Profile is used to express the criteria defining a reference group for comparison.

ComparatorGroup

Profile of Group for Evidence Based Medicine IG. The ComparatorGroup Profile is used to represent a group (definitional or enumerated) used as a comparator in a ComparativeEvidence.

ComparatorOnlyEvidence

Profile of Evidence for Evidence Based Medicine IG. The ComparatorOnlyEvidence Profile is used for evidence with a measured variable that is considered the outcome of an exposure or intervention, and a population that has an exposure with a categorical value that is the reference category for the exposure in a ComparativeEvidence Profile. The ComparatorOnlyEvidence describes the evidence for the comparator group.

Comparison

Profile of ArtifactAssessment for Evidence Based Medicine IG. The Comparison Profile is used for assessments of similarities and differences between knowledge artifacts.

CompositeRating

Profile of ArtifactAssessment for Evidence Based Medicine IG. The CompositeRating Profile is used for a composite rating or classification of a Resource that may be created following ratings or classifications by two or more parties.

DataDictionary

Profile of CodeSystem for Evidence Based Medicine IG. The DataDictionary Profile is used for a code key for variable names in a dataset.

DatabaseCitation

Profile of Citation for Evidence Based Medicine IG. The DatabaseCitation Profile is used for citations of a database.

DatabaseEntryCitation

Profile of Citation for Evidence Based Medicine IG. The DatabaseEntryCitation Profile is used for citations of a record within a database.

DatasetCitation

Profile of Citation for Evidence Based Medicine IG. The DatasetCitation Profile is used for citations of a dataset.

DateAsRating

Profile of ArtifactAssessment for Evidence Based Medicine IG. The DateAsRating Profile is used for representing a date or dateTime as a classifier value.

EndpointAnalysisPlan

Profile of Evidence for Evidence Based Medicine IG. The EndpointAnalysisPlan Profile is used for specification of the statistical model for analysis of a single endpoint.

EvidenceList

Profile of List for Evidence Based Medicine IG. The EvidenceList Profile is used to provide a list of Evidence Resources. The EvidenceList Profile is used to represent a Group of Evidence for the population for an EvidenceSynthesisEvidence using a summary data meta-analysis approach and is referenced from a MetaanalysisStudyGroup.

EvidenceMap

Profile of Composition for Evidence Based Medicine IG. The EvidenceMap Profile is used for an organized listing of Resources used to generate EvidenceReport instances.

EvidenceR6

Profile of Evidence for Evidence Based Medicine IG. The EvidenceR6 Profile is used to adjust the R5 Evidence base to match the structures in R6.

EvidenceReport

Profile of Composition for Evidence Based Medicine IG. The EvidenceReport Profile is used for a base structure (canonical resource management) for a report combining any number of Citation, Evidence, EvidenceVariable, EvidenceReport, and related Resources.

EvidenceReportSubject

Profile of Group for Evidence Based Medicine IG. The EvidenceReportSubject Profile is used to define the subject of an EvidenceReport.

EvidenceSynthesisEvidence

Profile of Evidence for Evidence Based Medicine IG. The EvidenceSynthesisEvidence Profile is used for evidence that is combined from two or more studies, explicitly expressing the method by which evidence was synthesized.

ExposureDefinition

Profile of Group for Evidence Based Medicine IG. The ExposureDefinition Profile is used to express the criteria defining an evidence variable (or categorical value for a variable) in the role of exposure.

ExposureGroup

Profile of Group for Evidence Based Medicine IG. The ExposureGroup Profile is used to represent a group (definitional or enumerated) used in a ComparativeEvidence.

GroupAssignment

Profile of EvidenceVariable for Evidence Based Medicine IG. The GroupAssignment Profile is used to classify an EvidenceVariable as an exposure managed as a categorical variable. The variable definitions are found in the category element instead of the definition element.

GroupR6

Profile of Group for Evidence Based Medicine IG. The GroupR6 Profile is used to adjust the R5 Group base to match the structures in R6.

Guideline

Profile of Composition for Evidence Based Medicine IG. The Guideline Profile is used for the composition of a clinical practice guideline and may be tightly related to use of Recommendation Profile of Composition for related content.

InterventionOnlyEvidence

Profile of Evidence for Evidence Based Medicine IG. The InterventionOnlyEvidence Profile is used for evidence with a measured variable that is considered the outcome of an exposure or intervention. The InterventionOnlyEvidence describes the evidence for the intervention group.

JournalArticleCitation

Profile of Citation for Evidence Based Medicine IG. The JournalArticleCitation Profile is used for citations of an article published in a periodical venue classified as a journal.

M11Report

Profile of Composition for Evidence Based Medicine IG. The M11Report Profile is used for the International Council for Harmonisation of Technical Requirements for Pharmaceuticals for Human Use (ICH) Clinical Electronic Structured Harmonised Protocol (CeSHarP) M11 Technical Specification.

MetaanalysisEligibilityCriteria

Profile of Group for Evidence Based Medicine IG. The MetaanalysisEligibilityCriteria Profile is used to describe inclusion and exclusion criteria for a meta-analysis.

MetaanalysisOutcomeDefinition

Profile of Group for Evidence Based Medicine IG. The MetaanalysisOutcomeDefinition Profile is used to express the criteria defining an evidence variable in the role of outcome where the population (dataset) is a set of Evidence Resources. Characteristics define the characteristics of the Evidence Resource to be eligible to be used for this outcome.

MetaanalysisStudyGroup

Profile of Group for Evidence Based Medicine IG. The MetaanalysisStudyGroup Profile is used to represent an enumerated group of participants in a meta-analysis where the participants are Evidence Resources.

NetEffectContribution

Profile of Evidence for Evidence Based Medicine IG. The NetEffectContribution Profile is used for evidence in which the effect estimates, expressed as risk differences, is multiplied by a relative importance rating of the outcomes.

NetEffectContributionList

Profile of List for Evidence Based Medicine IG. The NetEffectContributionList Profile is used to provide a list of Evidence Resources (NetEffectContribution Profile). The NetEffectContributionList Profile is used to represent a Group of Evidence for the population for a NetEffectEstimate (Profile of Evidence) using a net effect analysis approach and is referenced from a NetEffectContributions (Profile of Group).

NetEffectContributions

Profile of Group for Evidence Based Medicine IG. The NetEffectContributions Profile is used to represent an enumerated group of participants in a net effect analysis where the participants are Evidence Resources (NetEffectContribution Profile).

NetEffectEstimate

Profile of Evidence for Evidence Based Medicine IG. The NetEffectEstimate Profile is used for evidence in which the observed data is net effect contributions (effect estimates expressed as risk differences, multiplied by relative importance ratings of outcomes).

NonComparativeEvidence

Profile of Evidence for Evidence Based Medicine IG. The NonComparativeEvidence Profile is used for evidence about a single group with no comparisons between groups.

OutcomeDefinition

Profile of Group for Evidence Based Medicine IG. The OutcomeDefinition Profile is used to express the criteria defining an evidence variable (or categorical value for a variable) in the role of outcome.

OutcomeImportance

Profile of ArtifactAssessment for Evidence Based Medicine IG. The OutcomeImportance Profile is used for expression of the relative importance of an outcome. The outcome is typically expressed with an EvidenceVariable Resource and may use the VariableDefinition Profile of EvidenceVariable (or OutcomeDefinition Profile of Group).

OutcomeList

Profile of List for Evidence Based Medicine IG. The OutcomeList Profile is used to provide a list of outcomes. The OutcomeList Profile is referenced in the EvidenceReportSubject Profile as a way to define the set of outcomes that an EvidenceReport is about.

ParticipantFlow

Profile of Evidence for Evidence Based Medicine IG. The ParticipantFlow Profile is used for counts of completion and reasons for non-completion of participation in a research study.

ParticipantFlowMeasure

Profile of EvidenceVariable for Evidence Based Medicine IG. The ParticipantFlowMeasure Profile is used to describe outcome measures for completion and reasons for non-completion of participation in a research study.

ParticipantFlowReport

Profile of Composition for Evidence Based Medicine IG. The ParticipantFlowReport Profile is used for an evidence report including the counts (and proportions) for any number of participant flow measures in a research study. For example, the ParticipantFlowReport may include the data for a CONSORT Participant Flow Diagram reported with a randomized controlled trial.

PreprintCitation

Profile of Citation for Evidence Based Medicine IG. The PreprintCitation Profile is used for citations of an article published in a form prior to peer-reviewed publication in a journal, book, or other permanent record.

Rating

Profile of ArtifactAssessment for Evidence Based Medicine IG. The Rating Profile is used for classifier tags that may include quantitative ratings and may be created independently from Resource creators.

Recommendation

Profile of Composition for Evidence Based Medicine IG. The Recommendation Profile is used for the composition of a recommendation (such as that from a clinical practice guideline) and may be tightly related to a RecommendationPlan Profile of PlanDefinition and a RecommendationJustification Profile of ArtifactAssessment.

RecommendationAction

Profile of ActivityDefinition for Evidence Based Medicine IG. The RecommendationAction Profile is used for a recommendation from a clinical practice guideline.

RecommendationEligibilityCriteria

Profile of Group for Evidence Based Medicine IG. The RecommendationEligibilityCriteria Profile is used to express the criteria defining a group for whom a recommendation applies.

RecommendationJustification

Profile of ArtifactAssessment for Evidence Based Medicine IG. The RecommendationJustification Profile is used for expressing the rationale, evidence, and judgments supporting a recommendation, such as from a clinical practice guideline.

RecommendationPlan

Profile of PlanDefinition for Evidence Based Medicine IG. The RecommendationPlan Profile is used for the implementable representation of a recommendation (such as that from a clinical practice guideline).

RiskOfBias

Profile of ArtifactAssessment for Evidence Based Medicine IG. The RiskOfBias Profile is used for expression of the assessment of the threats to validity (or risk of bias) of an Evidence artifact or an artifact consisting of Evidence or the plan to create Evidence.

SearchResults

Profile of Library for Evidence Based Medicine IG. The SearchResults Profile is used to represent search results, such as for a systematic review.

SearchStrategy

Profile of Group for Evidence Based Medicine IG. The SearchStrategy Profile is used to express the criteria defining a search strategy, such as for a systematic review.

SingleStudyEvidence

Profile of Evidence for Evidence Based Medicine IG. The SingleStudyEvidence Profile is used for evidence from single studies, explicitly expressing that no studies were synthesized.

SoaPlanDefinition

Profile of PlanDefinition for temporary testing to coordination with M11 use.

SoftwareCitation

Profile of Citation for Evidence Based Medicine IG. The SoftwareCitation Profile is used for citations of executable code.

StudyEligibilityCriteria

Profile of Group for Evidence Based Medicine IG. The StudyEligibilityCriteria Profile is used to describe inclusion and exclusion criteria for a clinical trial or other research study.

StudyGroup

Profile of Group for Evidence Based Medicine IG. The StudyGroup Profile is used to represent an enumerated group of participants in a research study.

SummaryOfFindings

Profile of Composition for Evidence Based Medicine IG. The SummaryOfFindings Profile is used for an evidence report combining Evidence and EvidenceVariable Resources, organized around VariableDefinition (Profile of EvidenceVariable), to represent the summary of findings of comparative evidence.

SummaryOfNetEffect

Profile of Composition for Evidence Based Medicine IG. The SummaryOfNetEffect Profile is used for an evidence report combining ArtifactAssessment and Evidence and EvidenceVariable Resources, organized around VariableDefinition (Profile of EvidenceVariable), to represent the summary of net effect contributions of comparative evidence, adjusted for the relative importance of outcomes.

SystematicReviewEligibilityCriteria

Profile of Group for Evidence Based Medicine IG. The SystematicReviewEligibilityCriteria Profile is used to describe inclusion and exclusion criteria for a systematic review.

SystematicReviewExcludedStudies

Profile of Library for Evidence Based Medicine IG. The SystematicReviewExcludedStudies Profile is used to represent the subset of search results of a systematic review which did not meet the inclusion criteria.

SystematicReviewIncludedStudies

Profile of Library for Evidence Based Medicine IG. The SystematicReviewIncludedStudies Profile is used to represent the subset of search results of a systematic review which meet the inclusion criteria.

VariableDefinition

Profile of EvidenceVariable for Evidence Based Medicine IG. The VariableDefinition Profile uses a CodeableReference Datatype to provide a concept (e.g. coding in a code system) and/or a reference to a Group Resource for structured data to define the variable.

WebPageCitation

Profile of Citation for Evidence Based Medicine IG. The WebPageCitation Profile is used for citations of a web page or website, typically when there is not another type being used to classify the cited artifact.

Structures: Extension Definitions

These define constraints on FHIR data types for systems conforming to this implementation guide.

ArtifactApprovalDate

When the resource was approved by publisher.

ArtifactAssessmentCompared

The artifact being compared to the referenced artifact.

ArtifactAssessmentDateAsRating

A date or dateTime value as the classifier or rating value.

ArtifactEffectivePeriod

The period during which the resource content was or is planned to be in active use.

ArtifactLastReviewDate

When the resource was approved by publisher.

CharacteristicDescription

Natural language description of the characteristic.

CharacteristicDeterminedByExpression

Method for how the characteristic value was determined.

CharacteristicDeterminedByReference

Method for how the characteristic value was determined.

CharacteristicDurationDuration

Length of time in which the characteristic is met.

CharacteristicDurationRange

Length of time in which the characteristic is met.

CharacteristicInstancesQuantity

Number of occurrences meeting the characteristic.

CharacteristicInstancesRange

Number of occurrences meeting the characteristic.

CharacteristicMethod

Method for how the characteristic value was determined.

CharacteristicOffset

Defines the reference point for comparison when other than 0.

CharacteristicTiming

Timing in which the characteristic is determined.

CharacteristicValueExpression

The value of the trait that holds for members of the group, held by Expression.

CharacteristicValueUri

The value of the trait that holds for members of the group, held by uri.

CombinationMethod

Used to specify how two or more characteristics are combined.

CombinationThreshold

Provides the value of n when at-least or at-most codes are used for combinationMethod.

EvidenceVariableCategoryValueReference

Reference to a Group Resource to express a definition for a categorical value.

EvidenceVariableDefinition

Reference to a CodeableConcept and/or a Group Resource to express a definition for an EvidenceVariable.

StatisticModelApplied

The analysis that was applied.

StatisticModelExpression

An expression that defines the statistical analysis.

StatisticModelIncludeIf

The condition under which the variable (or modelCharacteristic) will be included.

StatisticModelIntended

The plan for analysis.

StatisticModelValueCodeableConcept

The specific value (when paired with code) as a CodeableConcept

StatisticModelValueQuantity

The specific value (when paired with code) as a Quantity

StatisticModelValueRange

The specific value (when paired with code) as a Quantity

VariableDefinitionComparatorCategory

The reference value used for comparison.

VariableDefinitionRoleSubtype

Sub-classification of the role of the variable.

VariableDefinitionVariableRoleCode

Classification of the role of the variable.

Terminology: Value Sets

These define sets of codes used by systems conforming to this implementation guide.

Evidence Variable Role Subtype Value Set

The sub-role that the variable plays.

Recommendation Justification Classifier Codes Value Set

Codes for use with the Classifier drop-down menu for FEvIR(R): Recommendation Justification Builder.

Example: Example Instances

These are example instances that show what data produced and consumed by systems conforming with this implementation guide might look like.

14-day mortality remdesivir vs placebo meta-analysis (ACTT-1, Wang et al, WHO SOLIDARITY)

COVID-19 pneumonia remdesivir vs. placebo 14-day mortality (779 events among 6,744 participants, 3 randomized trials) Risk ratio 0.85 (95% CI 0.74 to 0.96) in fixed-effect analysis Risk ratio 0.81 (95% CI 0.60 to 1.08) in random-effects analysis

14706014 Chemohormonal therapy as primary treatment for metastatic prostate cancer: a randomized study of estramustine phosphate plus luteinizing hormone-releasing hormone agonist versus flutamide plus luteinizing hormone-releasing hormone agonist.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

179899

This is an example describing the Boots Finger Pulse Oximeter for use in an example of Group.characteristic.determinedByReference and does not contain substantial detail as the focus is not the expression of device definition details.

18160893 Wonder woman. Like my childhood heroine, Mrs. Betty also had amazing powers.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

18508207 A Phase 3 placebo-controlled, double-blind, multi-site trial of the alpha-2-adrenergic agonist, lofexidine, for opioid withdrawal.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

19029421 Phase III trial of androgen ablation with or without three cycles of systemic chemotherapy for advanced prostate cancer.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

19091394 Endocrine treatment, with or without radiotherapy, in locally advanced prostate cancer (SPCG-7/SFUO-3): an open randomised phase III trial.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

19967827 Wonder woman was Argentine and her real name was Evita.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

22056152 Combined androgen deprivation therapy and radiation therapy for locally advanced prostate cancer: a randomised, phase 3 trial.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

22502942 Addition of radiotherapy to long-term androgen deprivation in locally advanced prostate cancer: an open randomised phase 3 trial.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

23306100 Androgen-deprivation therapy alone or with docetaxel in non-castrate metastatic prostate cancer (GETUG-AFU 15): a randomised, open-label, phase 3 trial.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

23452809 Long-term follow-up of a phase II trial of chemotherapy plus hormone therapy for biochemical relapse after definitive local therapy for prostate cancer.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

23604530 A phase II trial of androgen deprivation therapy (ADT) plus chemotherapy as initial treatment for local failures or advanced prostate cancer.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

24598155 Long-term results of a phase II study with neoadjuvant docetaxel chemotherapy and complete androgen blockade in locally advanced and high-risk prostate cancer.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

25301760 Survival with Newly Diagnosed Metastatic Prostate Cancer in the "Docetaxel Era": Data from 917 Patients in the Control Arm of the STAMPEDE Trial (MRC PR08, CRUK/06/019).

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

26002607 Should docetaxel be standard of care for patients with metastatic hormone-sensitive prostate cancer? Pro and contra.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

26028518 Androgen deprivation therapy plus docetaxel and estramustine versus androgen deprivation therapy alone for high-risk localised prostate cancer (GETUG 12): a phase 3 randomised controlled trial.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

26092557 Feasibility study of a randomized controlled trial comparing docetaxel chemotherapy and androgen deprivation therapy with sequential prostatic biopsies from patients with advanced non-castration-resistant prostate cancer.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

26244877 Chemohormonal Therapy in Metastatic Hormone-Sensitive Prostate Cancer.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

27222544 Metabolic Surgery in the Treatment Algorithm for Type 2 Diabetes: A Joint Statement by International Diabetes Organizations.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

27308831 Efficacy and Safety of Combined Androgen Deprivation Therapy (ADT) and Docetaxel Compared with ADT Alone for Metastatic Hormone-Naive Prostate Cancer: A Systematic Review and Meta-Analysis.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

29114761 Web Exclusives. Annals Story Slam - How Wonder Woman Became My Alter Ego.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

29114762 Web Exclusives. Annals Story Slam - Wonder Woman Is a Cartoon Character.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

29202628 "I Kinda Feel Like Wonder Woman": An Interpretative Phenomenological Analysis of Pole Fitness and Positive Body Image.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

29357271 Using Hawkeye from the Avengers to communicate on the eye.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

29694275 A regressive formula of perversity: Wertham and the women of comics.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

29694302 Introduction: "Suffering Sappho!": Lesbian content and queer female characters in comics.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

30467172 Finding my inner Wonder Woman.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

33395

Study results (Evidence Resources) included in Mean difference in HbA1c effect of bariatric surgery in 2016 meta-analysis

34871555 What Can Wonder Woman Teach Radiologists?

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

35243488 Bariatric surgery and cardiovascular disease: a systematic review and meta-analysis.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

36491989 Another Georgia Wonder Woman: She Does More Astounding Tricks Than Did Lula Hurst.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

6907780 Career guide: to change what needs changing...doesn't take Wonder Woman.

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

ADAS-Cog(11) EndpointAnalysisPlan from PHUSE Lilly Redacted Protocol - EBMonFHIR IG Version

An example of an EndpointAnalysisPlan Profile which uses intended=’true’ and include-if extensions within Evidence.statistic.modelCharacteristic elements.

Anticoagulation for COVID-19 Combined RCTs in NEJM

The peer-reviewed report for combination of 3 adaptive RCTs

Bariatric_Surgery_Eligibility_Group_ADA_Recommendation_8_16

Inclusion Criteria: [[1]] Adults. [[2]] Diagnosed with type 2 diabetes. [[3]] Body Mass Index (BMI) ≥ 40.0 kg/m2 (BMI ≥ 37.5 kg/m2 in Asian Americans), or BMI ≥ 35.0 kg/m2 and ≤ 39.9 kg/m2 (BMI 32.5-37.4 kg/m2 in Asian Americans) who do not achieve durable weight loss and improvement in comorbidities (including hyperglycemia) with nonsurgical methods. [[4]] Screened surgical candidates.

Bariatric_Surgery_Eligibility_Group_ADA_Recommendation_8_17

Inclusion Criteria: [[1]] Adults. [[2]] Diagnosed with type 2 diabetes. [[3]] Body Mass Index (BMI) ≥ 30.0 kg/m2 and ≤ 34.9 kg/m2 (BMI 27.5-32.4 kg/m2 in Asian Americans) who do not achieve durable weight loss and improvement in comorbidities (including hyperglycemia) with nonsurgical methods. [[4]] Screened surgical candidates.

Bariatric_Surgery_RYGB_VSG_LAGB_BPD

Any of 4 bariatric surgery procedures (Roux-en-Y Gastric Bypass, Vertical Sleeve Gastrectomy, Laparoscopic Adjustable Gastric banding, Biliopancreatic Diversion)

Baseline Measure Report: Association of Bariatric Surgery vs Medical Obesity Treatment With Long-term Medical Complications and Obesity-Related Comorbidities (2018 Norwegian Cohort)

This example of a BaselineMeasureReport Profile shows a report from a single observational study with 2 baseline measures.

BaselineMeasureEvidence: Age in 2018 Norwegian Cohort Medical Group

Age in Medical Group (n = 956) mean 45.7 years, SD 13.5 years

BaselineMeasureEvidence: Age in 2018 Norwegian Cohort Surgical Group

Age in Surgical Group (n = 932) mean 41.2 years, SD 10.5 years

BaselineMeasureEvidence: BMI in 2018 Norwegian Cohort Medical Group

BMI in Medical Group (n = 956) mean 42.9 kg/m2, SD 5.7 kg/m2

BaselineMeasureEvidence: BMI in 2018 Norwegian Cohort Surgical Group

BMI in Surgical Group (n = 932) mean 45.4 kg/m2, SD 6.2 kg/m2

BookCitation: Crossing the Quality Chasm: A New Health System for the 21st Century

An example to map the BookCitation Profile

BookPartCitation: Chapter 3 of Crossing the Quality Chasm: A New Health System for the 21st Century

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

BookPartCitation: Chapter 3 of Crossing the Quality Chasm: A New Health System for the 21st Century - without baseCitation

An example to map the BookCitation Profile

CIBIC+ EndpointAnalysisPlan from PHUSE Lilly Redacted Protocol - EBMonFHIR IG Version

An example of an EndpointAnalysisPlan Profile which uses intended=’true’ and include-if extensions within Evidence.statistic.modelCharacteristic elements.

COVID_19PneumoniaHospitalizedAdult

This example of a Group Resource is referenced from an example in the EBMonFHIR Implementation Guide. This example shows a definitional value for the membership element and a person value for the type element.

Certainty of Evidence Rating of 14-day mortality remdesivir vs placebo meta-analysis (ACTT-1, Wang et al, WHO SOLIDARITY)

This example of a CertaintyOfEvidence Profile shows a recursive pattern of component elements with type/classifier paired values for different aspects of rating the certainty of evidence.

Citation for FEvIR Evidence 55: 14-day mortality remdesivir vs placebo meta-analysis (ACTT-1, Wang et al, WHO SOLIDARITY)

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

Citation for FEvIR Evidence 7637: Critically appraised summary of primary outcome of multi-platform RCT of anticoagulation for non-critically ill COVID-19

A Evidence Resource to demonstrate complex evidence reporting

Classification: Study Design for Association of Bariatric Surgery with Complications and Comorbidities JAMA 2018 Norwegian Cohort

This Classification Profile example is used to represent the study design classifiers (as CodeableConcept datatype values) in support of a ComparativeEvidenceReport Profile.

CohortDefinition_At_least_2_risk_factors_for_stroke

This example shows used of combinationMethod (at-least) and combinationThreshold (2) to express at least 2 of a set of characteristics.

CohortDefinition_BMI_27_5_32_4_in_Asian_Americans_who_do_not_achieve_durable_weight_loss_and_improvement_in_comorbidities_without_surgery

BMI 27.5-32.4 in Asian Americans who do not achieve durable weight loss and improvement in comorbidities without surgery

CohortDefinition_BMI_30_34_9_in_persons_who_do_not_achieve_durable_weight_loss_and_improvement_in_comorbidities_without_surgery

BMI 30-34.9 in persons who do not achieve durable weight loss and improvement in comorbidities without surgery

CohortDefinition_BMI_32_5_37_4_in_Asian_Americans_who_do_not_achieve_durable_weight_loss_and_improvement_in_comorbidities_without_surgery

BMI 32.5-37.4 in Asian Americans who do not achieve durable weight loss and improvement in comorbidities without surgery

CohortDefinition_BMI_35_39_9_in_persons_who_do_not_achieve_durable_weight_loss_and_improvement_in_comorbidities_without_surgery

BMI 35-39.9 in persons who do not achieve durable weight loss and improvement in comorbidities without surgery

CohortDefinition_BMI_35_and_at_least_1_obesity_related_comorbidity

BMI ≥ 35 and at least 1 obesity-related comorbidity

CohortDefinition_BMI_37_5_kg_m2_in_Asian_Americans

BMI ≥ 37.5 kg/m2 in Asian Americans

CohortDefinition_BMI_criteria_for_ADA_surgery_recommendation

Body Mass Index (BMI) ≥ 40.0 kg/m2 (BMI ≥ 37.5 kg/m2 in Asian Americans), or BMI ≥ 35.0 kg/m2 and ≤ 39.9 kg/m2 (BMI 32.5-37.4 kg/m2 in Asian Americans) who do not achieve durable weight loss and improvement in comorbidities (including hyperglycemia) with nonsurgical methods.

CohortDefinition_Cancer_of_any_kind_except_basal_cell_skin_cancer_or_cancer_in_situ_unless_documented_to_be_disease_free_for_five_years

Cancer of any kind (except basal cell skin cancer or cancer in situ) unless documented to be disease-free for five years

CohortDefinition_Cardiovascular_event

Cardiovascular event (myocardial infarction, acute coronary syndrome, coronary artery angioplasty or bypass, stroke)

CohortDefinition_Heart_failure_based_on_Phenotypes

This example shows how to express a Group defined by meeting either of two phenotype definitions for ‘heart failure’ where the phenotype definitions are found by URL in a system not using FHIR for phenotype expression. This demonstrates the Group.characteristic.valueUri element.

CohortDefinition_Lower_BMI_criteria_for_ADA_surgery_consideration

Body Mass Index (BMI) ≥ 30.0 kg/m2 and ≤ 34.9 kg/m2 (BMI 27.5-32.4 kg/m2 in Asian Americans) who do not achieve durable weight loss and improvement in comorbidities (including hyperglycemia) with nonsurgical methods.

CohortDefinition_Nonfatal_myocardial_infarction

Nonfatal myocardial infarction

CohortDefinition_Nonfatal_stroke

Nonfatal myocardial infarction

CohortDefinition_Oxygen_saturation_96_on_Boots_Finger_Pulse_Oximeter

A characteristic of oxygen saturation < 96% on Boots Finger Pulse Oximeter is shown here, specifically at least 3 episodes lasting at least 5 minutes. LOINC Code for oxygen saturation does not specify the device used. If defining a Group characteristic by the device used, for example, in research comparing devices, one needs to reference the DeviceDefinition, Device, or DeviceMetric Resources. This example uses Group.characteristic.determinedByReference to show where the device may be reported, Group.characteristic.instancesQuantity to express at least 3 episodes, and Group.characteristic.durationDuration to express at least 5 minutes.

CohortDefinition_Oxygen_saturation_96_on_Boots_Finger_Pulse_Oximeter_with_Ranges

A characteristic of oxygen saturation < 96% on Boots Finger Pulse Oximeter is shown here, specifically 2-4 episodes lasting 10-15 minutes. LOINC Code for oxygen saturation does not specify the device used. If defining a Group characteristic by the device used, for example, in research comparing devices, one needs to reference the DeviceDefinition, Device, or DeviceMetric Resources. This example uses Group.characteristic.determinedByReference to show where the device may be reported, Group.characteristic.instancesRange to express 2-4 episodes, and Group.characteristic.durationRange to express 10-15 minutes.

CohortDefinition_Proxy_criteria_for_surgical_candidates

Exclusion Criteria: Cardiovascular event (myocardial infarction, acute coronary syndrome, coronary artery angioplasty or bypass, stroke) in the past six months. Current evidence of congestive heart failure, angina pectoris, or symptomatic peripheral vascular disease. Cardiac stress test indicating that surgery or IMM would not be safe. Pulmonary embolus or thrombophlebitis in the past six months. Cancer of any kind (except basal cell skin cancer or cancer in situ) unless documented to be disease-free for five years. Significant anemia (hemoglobin 1.0 g or more below normal range) or history of coagulopathy. Serum creatinine ≥ 1.5 mg/dl. HbA1c > 14.0%.

CohortDefinition_Severe_obesity

BMI at least 40 or at least 35 with at least 1 obesity-related comorbidity

Comment on Guideline: ADA 2021 Standards of Medical Care 8. Obesity Management for the Treatment of Type 2 Diabetes by Joanne Dehnbostel 2023-11-28T15:19:01.266Z

This example of a Comment Profile shows a comment about another Resource (Guideline Profile) in which the commenter is not the author of the Resource commented upon.

ComparativeBaselineMeasureEvidence: Age in 2018 Norwegian Cohort Surgical Group vs. Medical Group

Mean age 41.2 in Surgical Group vs. 45.7 in Medical Group (p < 0.001)

ComparativeBaselineMeasureEvidence: BMI in 2018 Norwegian Cohort Surgical Group vs. Medical Group

Mean BMI 45.4 in Surgical Group vs. 42.9 in Medical Group (p < 0.001)

ComparativeEvidence: All-cause mortality effect of bariatric surgery in 2022 meta-analysis

effect estimate for bariatric surgery on all-cause mortality pooled hazard ratio (HR) 0.55 (95% confidence interval 0.49 to 0.62; P < 0.001 vs. controls) in meta-analysis of 21 cohort studies with 133,524 patients after bariatric surgery and 263,478 obese controls

ComparativeEvidence: Bariatric Surgery effect for ADA triple outcome at 5 years (Diabetes Surgery Study)

Of 120 participants who were initially randomized, 98 (82%) completed 5 years of follow-up. At 5 years, 13 participants (23%) in the gastric bypass group and 2 (4%) in the lifestyle-intensive medical management group had achieved the composite triple end point (difference, 19%; 95% CI, 4%-34%; P = .01).

ComparativeEvidence: Bypass surgery effects on Additional GI surgical procedure in JAMA 2018 Norwegian cohort study

Surgical patients had a greater risk for undergoing at least 1 additional gastrointestinal surgical procedure (AR, 31.3% vs 15.5%; RD, 15.8% [95% CI, 13.1%-18.5%]; RR, 2.0 [95% CI, 1.7-2.4]).

ComparativeEvidence: Bypass surgery effects on Myocardial infarction or stroke in Swedish Obese Subjects (SOS) study

Bariatric surgery was associated with a reduced number of cardiovascular deaths (28 events among 2010 patients in the surgery group vs 49 events among 2037 patients in the control group; adjusted hazard ratio [HR], 0.47; 95% CI, 0.29-0.76; P = .002). The number of total first time (fatal or nonfatal) cardiovascular events (myocardial infarction or stroke, whichever came first) was lower in the surgery group (199 events among 2010 patients) than in the control group (234 events among 2037 patients; adjusted HR, 0.67; 95% CI, 0.54-0.83; P < .001). – Extrapolated from this data the outcome of Nonfatal myocardial infarction or stroke occurred in 188 out of 2037 patients in the control group and 171 out of 2010 patients in the surgery group, and the adjusted HR for total events is assumed to apply (adjusted HR 0.67, 95% CI 0.54 to 0.83)

ComparativeEvidence: Bypass surgery effects on New onset depression in JAMA 2018 Norwegian cohort study

greater risk of new-onset depression: AR, 8.9% vs 6.5%; RD, 2.4% [95% CI, 1.3%-3.5%], RR, 1.5 [95% CI, 1.4-1.7]

ComparativeEvidence: Bypass surgery effects on Remission of diabetes in JAMA 2018 Norwegian cohort study

greater likelihood of diabetes remission: AR, 57.5% vs 14.8%; RD, 42.7% [95% CI, 35.8%-49.7%], RR, 3.9 [95% CI, 2.8-5.4]

ComparativeEvidence: Bypass surgery effects on Treatment with opioids in JAMA 2018 Norwegian cohort study

greater risk of treatment with opioids: AR, 19.4% vs 15.8%, RD, 3.6% [95% CI, 2.3%-4.9%], RR, 1.3 [95% CI, 1.2-1.4]

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Courcoulas 2014

Mean HbA1c at 12 months in Courcoulas 2014 was 6.6 % in Surgery group (n = 41) and 7.0% in Medical/Lifestyle group (n = 17), mean difference -0.40% (95% CI -0.89% to 0.09%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Courcoulas 2015

Mean HbA1c at 36 months in Courcoulas 2015 was 7.1% in Surgery group (n = 38) and 7.2% in Medical/Lifestyle group (n = 14), mean difference -0.10% (95% CI -0.35% to 0.15%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Cummings 2016

Mean HbA1c at 12 months in Cummings 2016 was 6.4% in Surgery group (n = 15) and 6.9% in Medical/Lifestyle group (n = 17), mean difference -0.50% (95% CI -1.52% to 0.52%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Ding 2015

Mean HbA1c at 12 months in Ding 2015 was 7.17 % in Surgery group (n = 18) and 7.15% in Medical/Lifestyle group (n = 22), mean difference 0.02% (95% CI -0.16% to 0.20%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Dixon 2008

Mean HbA1c at 24 months in Dixon 2008 was 6% in Surgery group (n = 30) and 7.2% in Medical/Lifestyle group (n = 30), mean difference -1.20% (95% CI -1.78% to -0.62%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Halperin 2014

Mean HbA1c at 12 months in Halperin 2014 was 6.2 % in Surgery group (n = 19) and 8.8% in Medical/Lifestyle group (n = 19), mean difference -2.60% (95% CI -3.37% to -1.83%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Ikramuddin 2013

Mean HbA1c at 12 months in Ikramuddin 2013 was 6.3 % in Surgery group (n = 57) and 7.8% in Medical/Lifestyle group (n = 19), mean difference -1.50% (95% CI -1.95% to -1.05%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Ikramuddin 2015

Mean HbA1c at 24 months in Ikramuddin 2015 was 6.5% in Surgery group (n = 56) and 8.4% in Medical/Lifestyle group (n = 54), mean difference -1.90% (95% CI -2.78% to -1.02%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Liang 2013

Mean HbA1c at 12 months in Liang 2013 was 6 % in Surgery group (n = 31) and 7.6% in Medical/Lifestyle group (n = 70), mean difference -1.60% (95% CI -1.94% to -1.26%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Mingrone 2012 (DIBASY) trial

Mean HbA1c at 24 months in Mingrone 2012 was 5.65% in Surgery group (n = 20) and 7.69% in Medical/Lifestyle group (n = 20), mean difference -2.04% (95% CI -2.53% to -1.55%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Mingrone 2015 (DIBASY) trial

Mean HbA1c at 60 months in Mingrone 2015 was 6.55% in Surgery group (n = 38) and 6.9% in Medical/Lifestyle group (n = 15), mean difference -0.35% (95% CI -0.69% to -0.01%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Parikh 2014

Mean HbA1c at 6 months in Parikh 2014 was 6.2 % in Surgery group (n = 20) and 7.8% in Medical/Lifestyle group (n = 24), mean difference -1.60% (95% CI -2.39% to -0.81%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Schauer 2012 (STAMPEDE) trial

Mean HbA1c at 12 months in Schauer 2012 was 6.5% in Surgery group (n = 99) and 7.5% in Medical/Lifestyle group (n = 41), mean difference -1.00% (95% CI -1.58% to -0.42%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Schauer 2014 (STAMPEDE) trial

Mean HbA1c at 36 months in Schauer 2014 was 6.85% in Surgery group (n = 97) and 8.4% in Medical/Lifestyle group (n = 40), mean difference -1.55% (95% CI -2.28% to -0.82%)

ComparativeEvidence: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups in Wentworth 2014

Mean HbA1c at 24 months in Wentworth 2014 was 6.1% in Surgery group (n = 23) and 7.3% in Medical/Lifestyle group (n = 25), mean difference -1.20% (95% CI -1.84% to -0.56%)

ComparativeEvidence: Mean difference in HbA1c effect of bariatric surgery in 2016 meta-analysis

effect estimate for differences in mean HbA1c at study end point between Surgery and Medical/Lifestyle groups -1.14% (95% CI -1.57% to -0.71%) in meta-analysis of 15 trials with 1,067 participants

ComparativeEvidenceReport: Association of Bariatric Surgery vs Medical Obesity Treatment With Long-term Medical Complications and Obesity-Related Comorbidities (2018 Norwegian Cohort)

This example of a ComparativeEvidenceReport Profile shows a report from a single observational study with 2 baseline measures, 2 participant flow measures, and 4 outcome measures.

ComparativeEvidenceReportSubject_Association_of_Bariatric_Surgery_vs_Medical_Obesity_Treatment_With_Long_term_Medical_Complications_and_Obesity_Related_Comorbidities_2018_Norwegian_Cohort

This example of a ComparativeEvidenceReportSubject Profile expresses the conceptual group of PICO elements using the ‘all of’’ code in the combinationMethod element. Each of the characteristics described in this example are defined by reference to another Resource so the characteristic.code element has a value of text:’Defined by Reference’ and uses a valueReference element. Three of the characteristics are defined by reference to a Group Resource and the last characteristic (Outcomes) is defined by reference to a List Resource. This example demonstrates the use of the ‘conceptual’ code for the membership element. In this case the Group Resource is being used for the conceptual grouping of characteristics and is not a group of people or physical objects.

ComparativeParticipantFlow: Dropout due to stopping intervention Lofexidine vs. Placebo in opioid detoxification trial

Dropout due to stopping intervention 18/33 with Lofexidine vs. 12/35 with Placebo in opioid detoxification trial

ComparatorDefinition_NOT_Bariatric_Surgery_RYGB_VSG_LAGB_BPD

Absence of any of 4 bariatric surgery procedures (Roux-en-Y Gastric Bypass, Vertical Sleeve Gastrectomy, Laparoscopic Adjustable Gastric banding, Biliopancreatic Diversion)

ComparatorDefinition_Usual_care_pharmacologic_thromboprophylaxis

Description: usual-care pharmacologic thromboprophylaxis Note: Thromboprophylaxis was provided at a dose and duration determined by the treating clinician according to local practice. Note: Usual-care pharmacological thromboprophylaxis included both intermediate-intensity (in 27%) and prophylactic-intensity dosing (in 72%). Subgroup analyses may be informative to determine if there is a difference related to the intensity used in the control arm of the trial.

ComparatorGroup_JAMA_2018_Norwegian_cohort_study_Control_cohort

Example of an ComparatorGroup Profile with an enumerated group (quantity = 956) meeting 2 characteristics defined by Group Resources (Member of a StudyGroup Profile, excluding a Procedure defined by an ExposureDefinition Profile)

ComparatorGroup_Obese_patients_18_years_old_without_bariatric_surgery

This example of a ComparatorGroup Profile expresses the definition of a group by the combination of meeting both (all of) two characteristics by using the ‘all-of’ code in the combinationMethod element. Each of the two characteristics in this example are defined by reference to another Group Resource, so the characteristic.code element has a value of text:’Defined by Reference’ and uses a valueReference element.

ComparatorOnlyEvidence: Additional GI surgical procedure without bariatric surgery (Control Group) in JAMA 2018 Norwegian cohort study

Risk of additional GI surgical procedure in control group was 15.5%.

ComparatorOnlyEvidence: All-cause mortality without bariatric surgery in 2022 meta-analysis

estimate for all-cause mortality without bariatric surgery 4.75% based on median control event rate in 26 cohort studies with post-bariatric surgery patients and obese controls

ComparatorOnlyEvidence: Myocardial infarction or stroke without bariatric surgery (Control Group) in Swedish Obese Subjects (SOS) study

Bariatric surgery was associated with 49 cardiovascular deaths among 2037 patients in the control group. The number of total first time (fatal or nonfatal) cardiovascular events (myocardial infarction or stroke, whichever came first) in the control group was 234 events among 2037 patients. Extrapolated from this data the outcome of Nonfatal myocardial infarction or stroke occurred in 188 out of 2037 patients in the control group.

ComparatorOnlyEvidence: New onset depression without bariatric surgery (Control Group) in JAMA 2018 Norwegian cohort study

Risk of New onset depression in control group was 6.5%.

ComparatorOnlyEvidence: Remission of diabetes without bariatric surgery (Control Group) in JAMA 2018 Norwegian cohort study

Risk of Remission of diabetes in control group was 14.8%.

ComparatorOnlyEvidence: Treatment with opioids without bariatric surgery (Control Group) in JAMA 2018 Norwegian cohort study

Risk of Treatment with opioids in control group was 15.8%.

Comparison: Original and Adapted Recommendation: ADA Obesity Management Recommendation 8.16

This Comparison Profile shows a comparison of top-level elements between two Resources and classifies each element pairing as Same or Different based on whether the content is a match.

Composite Rating of FOI 153881 for Project FOI 112280

This example of a CompositeRating Profile is a result from evaluating 2 or more Rating Profile instances about the same artifactReference and path, and reporting the agreed value in the summary element with a classifier value of SAME when all ratings were in agreement, and reporting MISMATCH in both elements when disagreements occurred.

Computable_Publishing_LLC

Computable Publishing® augments digital publishing with machine-interpretable forms. Computable Publishing® offers publishers of any type (commercial, nonprofit, academic, government) the ability to extend their published works with computable (machine-interpretable) forms of expression, and users of any type support in using computable data to enhance, improve and achieve desired outcomes.

Critically appraised summary of primary outcome of multi-platform RCT of anticoagulation for non-critically ill patients with COVID-19

Patients who were hospitalized for COVID-19 and who were not critically ill were randomized in a response-adaptive manner to therapeutic-dose anticoagulation with heparin vs. usual-care pharmacologic thromboprophylaxis. The outcome reported here is the effect on organ support-free days (i.e. days without oxygen delivered by high-flow nasal cannula, noninvasive or invasive mechanical ventilation, or the use of vasopressors or inotropes). The statistical result was a median adjusted odds ratio 1.27 (95% credible interval 1.03 to 1.58), based on 1,740 events among 2,219 participants with known outcome out of 2,244 enrolled participants. The probability of superiority of therapeutic-dose anticoagulation with heparin was 98.6%. The risk of bias in this effect estimate is of extremely serious concern based on a serious concern for confounding covariate bias (confounding difference in calendar time), a very serious concern for performance bias (inadequate blinding of intervention deliverers who may determine the outcome based in part on exposure status), and very serious concern for analysis bias (bias related to selection of the analysis, and early trial termination).

DataDictionary: Measuring the Rate of Scientific Knowledge Transfer

A data dictionary (variable names) for research studies designed to measure the rate of scientific knowledge transfer.

DataDictionary: phs003190

This is an example of a DataDictionary Profile for the EBMonFHIR Implementation Guide.

DatabaseCitation: Citation for FEvIR Platform

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

DatabaseEntryCitation: ComparativeEvidenceReport: Association of Bariatric Surgery vs Medical Obesity Treatment With Long-term Medical Complications and Obesity-Related Comorbidities (2018 Norwegian Cohort)

A citation of a Resource on the FEvIR Platform

DatasetCitation: Extrachromosomal DNA Amplification Contributes to Small Cell Lung Cancer Heterogeneity and is Associated with Worse Outcomes

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

DateOfFirstPublication Classification of FOI 153881 by Rachel Couban

This example shows classifications with classifier values including dates.

Delany-Moretlwe 2022 clinical trial

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

EBMImplementationGuideProfile Value Set

This value set is a temporary workspace while drafting the Evidence Based Medicine Implementation Guide. It may not be stable and may not be persistent.

EGFR_45_59

A characteristic of estimated glomerular filtration rate (eGFR) of 45-59 mL/min/1.73m2 is shown here. LOINC Code guidance states ‘If transitioning to the new 2021 calculations, note there are separate equations for male and female patients that need to be implemented. The same LOINC code is applied regardless of which sex-based equation is used to generate the result. Laboratories need to build each male and female equation within their LIS and validate per their accreditation requirements.’ and ‘While LOINC does not have a specific code for reporting the exact equation used to calculate eGFR, it may be appropriate for labs to transmit this information as part of the information contained in the result comment field. The individual laboratory should determine whether it is better to include the equation, or the author(s) of the equation, to identify the method used to perform the eGFR calculation.’ This example uses Group.characteristic.determinedByExpression to show where the exact equation may be reported.

Evidence Based Medicine on FHIR Implementation Guide Code System

This code system is a temporary workspace while drafting the Evidence Based Medicine Implementation Guide. It may not be stable and may not be persistent.

EvidenceList: Effect estimates for meta-analysis (Biegel 2020, Wang 2020, SOLIDARITY)

A list of study results used to provide the group members for a MetaAnalysisStudyGroup Profile.

EvidenceList: Study results included in Mean difference in HbA1c effect of bariatric surgery in 2016 meta-analysis

A list of Evidence Resources (ComparativeEvidence Profile) used to provide the group members for a MetaAnalysisStudyGroup Profile.

EvidenceMap: Bariatric Surgery Summary of Findings Example for GIN 2022

This example EvidenceMap has content that can be used for a SummaryOfFindings Profile of Composition.

EvidenceReportSectionCode Value Set

This value set is a temporary workspace while drafting the Evidence Based Medicine Implementation Guide. It may not be stable and may not be persistent.

EvidenceReportSubject_Clinical_Outcomes_for_Effects_of_Bariatric_Surgery

Population Patients eligible for bariatric surgery, Intervention Bariatric surgery, Comparator No bariatric surgery, selected Clinical Outcomes

EvidenceVariableRoleSubtype Value Set

This value set is a temporary workspace while drafting the Evidence Based Medicine Implementation Guide. It may not be stable and may not be persistent.

Example EndpointAnalysisPlan from PHUSE Lilly Redacted Protocol - EBMonFHIR IG Version

An example of an EndpointAnalysisPlan Profile which uses intended=’true’ and include-if extensions within Evidence.statistic.modelCharacteristic elements.

ExposureDefinition_Therapeutic_dose_anticoagulation_with_heparin

Description: therapeutic-dose anticoagulation with heparin Note: Therapeutic-dose anticoagulation with unfractionated or low-molecular-weight heparin was administered according to local protocols for the treatment of acute venous thromboembolism for up to 14 days or until recovery; the latter was defined as hospital discharge or a discontinuation of supplemental oxygen for at least 24 hours.

ExposureGroup_JAMA_2018_Norwegian_cohort_study_Surgery_cohort

Example of an ExposureGroup Profile with an enumerated group (quantity = 932) meeting 2 characteristics defined by Group Resources (Member of a StudyGroup Profile, Procedure defined by an ExposureDefinition Profile)

ExposureVariable: Age (as continuous variable)

This example expresses the variable ‘Age’ as a continuous variable with a simple definition using definition.concept.coding and is used with the BaselineMeasureEvidence Profile of Evidence in the Evidence.variableDefinition with variableRole=’outcome’

ExposureVariable: Body Mass Index (as continuous variable)

This example expresses the variable ‘Body Mass Index’ as a continuous variable with a simple definition using definition.concept.coding and is used with the BaselineMeasureEvidence Profile of Evidence in the Evidence.variableDefinition with variableRole=’outcome’

ExposureVariable: pht013093.v1.p1 Age at diagnosis

Subject age at diagnosis - datatype integer, encoded value

ExposureVariable: pht013093.v1.p1 RACE

Self-reported race - datatype string

ExposureVariable: pht013093.v1.p1 SEX

Self-reported sex - datatype CodeableConcept

ExposureVariable: pht013093.v1.p1 SUBJECT_ID

Subject ID - datatype string

ExposureVariable: pht013094.v1.p1 ANALYTE_TYPE

Analyte type of the sample - datatype string

ExposureVariable: pht013094.v1.p1 BODY_SITE

Body site where sample was collected - datatype string

ExposureVariable: pht013094.v1.p1 IS_TUMOR

The tumor status of the sample - datatype CodeableConcept

ExposureVariable: pht013094.v1.p1 SAMPLE_ID

Sample ID - datatype string

ExposureVariable: pht013094.v1.p1 SAMPLE_USE

Technology employed on the sample - datatype string

ExposureVariable: pht013094.v1.p1 Source_Type

Source of sample - datatype string

GroupAssignment: Bariatric Surgery vs. no bariatric surgery

This example of a GroupAssignment Profile describes a 2-group study (so handling=’dichotomous’) and lists the 2 study arms in category.name elements. Because the definition of this EvidenceVariable Resource is fully expressed in the handling and category elements, the defintion.concept element uses a CodeableConcept for ‘Defined in handling and category elements’.

GroupAssignment: ExposureDefinition: Bariatric Surgery (RYGB, VSG, LAGB, BPD) vs. ComparatorDefinition: NOT Bariatric Surgery (RYGB, VSG, LAGB, BPD)

This EvidenceVariable Resource (GroupAssignment Profile) describes a 2-group study (so handling=’dichotomous’) and lists the 2 study arms in category.name elements. Because the definition of this EvidenceVariable Resource is fully expressed in the handling and category elements, the defintion.concept element uses a CodeableConcept for ‘Defined in handling and category elements’.

GroupAssignment: Roux-en-Y gastric bypass or Biliopancreatic Diversion vs. medical treatment

This example of a GroupAssignment Profile describes a 2-group study (so handling=’dichotomous’) and lists the 2 study arms in category.name elements. Because the definition of this EvidenceVariable Resource is fully expressed in the handling and category elements, the defintion.concept element uses a CodeableConcept for ‘Defined in handling and category elements’.

GroupAssignment: Roux-en-Y gastric bypass surgery vs. Lifestyle-intensive medical management intervention alone

This example of a GroupAssignment Profile describes a 2-group study (so handling=’dichotomous’) and lists the 2 study arms in category.name elements. Because the definition of this EvidenceVariable Resource is fully expressed in the handling and category elements, the defintion.concept element uses a CodeableConcept for ‘Defined in handling and category elements’.

GroupAssignment: Roux-en-Y gastric bypass vs. medical treatment

This example of a GroupAssignment Profile describes a 2-group study (so handling=’dichotomous’) and lists the 2 study arms in category.name elements. Because the definition of this EvidenceVariable Resource is fully expressed in the handling and category elements, the defintion.concept element uses a CodeableConcept for ‘Defined in handling and category elements’.

GroupAssignment: Therapeutic-dose anticoagulation with heparin vs. Usual-care pharmacologic thromboprophylaxis

Therapeutic-dose anticoagulation with heparin vs. Usual-care pharmacologic thromboprophylaxis in multi-platform RCT of anticoagulation for non-critically ill patients with COVID-19

GroupAssignment: high dose xanomeline vs. low dose xanomeline vs. placebo

This example of a GroupAssignment Profile describes a 3-arm trial (so handling=’polychotomous’) and lists the 3 trial arms in category.name elements. Because the definition of this EvidenceVariable Resource is fully expressed in the handling and category elements, the defintion.concept element uses a CodeableConcept for ‘Defined in handling and category elements’.

Guideline: ADA 2021 Standards of Medical Care 8. Obesity Management for the Treatment of Type 2 Diabetes

Example of Guideline Profile of Composition Resource.

IV remdesivir 200 mg then 100 mg/day for 9 days

This example uses the Dosage datatype to represent dosing for IV remdesivir.

InterventionOnlyEvidence: Additional GI surgical procedure with bariatric surgery (Intervention Group) in JAMA 2018 Norwegian cohort study

Risk of additional GI surgical procedure in intervention group was 31.3%. 292 out of 932 observed with percentage of: 31.3%

InterventionOnlyEvidence: New onset depression with bariatric surgery (Intervention Group) in JAMA 2018 Norwegian cohort study

Risk of New onset depression in intervention group was 8.9%.

InterventionOnlyEvidence: Remission of diabetes with bariatric surgery (Intervention Group) in JAMA 2018 Norwegian cohort study

Risk of Remission of diabetes in intervention group was 57.5%.

InterventionOnlyEvidence: Treatment with opioids with bariatric surgery (Intervention Group) in JAMA 2018 Norwegian cohort study

Risk of Treatment with opioids in intervention group was 19.4%.

Investigator

For all ANOVA and ANCOVA models, data collected from investigators who enrolled fewer than 3 patients in any one treatment group will be combined prior to analysis. If this combination still results in a treatment group having fewer than 3 patients in any one treatment group, then this group of patients will be combined with the next fewest enrolling investigator. In the event that there is a tie for fewest-enrolling investigator, one of these will be chosen at random by a random-number generator.

Investigator-by-treatment interaction for ADAS-Cog(11) ANCOVA

The Investigator-by-treatment interaction variable is polychotomous (a category for each investigator) but the investigator names are unknown at the time of trial planning so the category element is not used to define the categories.

Joanne Dehnbostel's Adaptation Report of Recommendation: ADA Obesity Management Recommendation 8.16

This example of an Adaptation Profile shows the specific content that was changed when adapting one Recommendation Profile instance to create a new Recommendation Profile instance, serving a role of ‘track changes’ for structured data.

JournalArticleCitation: ADA 2021 Standards of Medical Care 8. Obesity Management for the Treatment of Type 2 Diabetes

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

JournalArticleCitation: Association of Bariatric Surgery with Complications and Comorbidities JAMA 2018 Norwegian Cohort

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

Justification for Recommendation: ADA Obesity Management Recommendation 8.16

An example using the ArtifactAssessment Resource for representation of the many judgments and concepts used to justify a recommendation.

Justification for Recommendation: ADA Obesity Management Recommendation 8.17

An example using the ArtifactAssessment Resource for representation of the many judgments and concepts used to justify a recommendation.

M11 Report Template Instructions

This M11Report Profile of Composition includes the instructions in each section.text.div element for creating an M11Report instance.

MetaanalysisEligibilityCriteria_Mean_difference_in_HbA1c_effect_of_bariatric_surgery_in_type_2_diabetes_and_elevated_BMI_in_2016_meta_analysis

Study population includes type 2 diabetes and BMI > 25 kg/m2; study design includes randomized assignment; exposure is bariatric surgery vs. no bariatric surgery; outcome measured is mean difference in HbA1c comparing bariatric surgery vs. no bariatric surgery

MetaanalysisOutcomeDefinition_Mean_difference_in_HbA1c_between_Surgery_and_Medical_Lifestyle_groups_at_end_of_follow_up

Mean difference in HbA1c between Surgery and Medical/Lifestyle groups at end of follow-up. As a MetaanalysisOutcomeDefinition, the type of object that has the characteristics in the definition is an Evidence Resource.

MetaanalysisStudyGroup_Effect_Estimates_for_Mortality_at_14_days_from_COVID19_Remdesivir_vs_Placebo_RCTs

Effect Estimates for Mortality at 14 days from COVID19 Remdesivir vs. Placebo RCTs (Biegel 2020 data 35/541 vs. 61/521) (Wang 2020 data 15/153 vs. 7/78) (SOLIDARITY data 219/2743 vs. 219/2708)

Mortality at 14 days

mortality at 14 days

NetEffectContribution: Additional GI surgical procedure for Example for GIN 2022

-1.24 (-1.74 to -0.87)

NetEffectContribution: All-cause mortality for Example for GIN 2022

2.14 (1.8 to 2.42)

NetEffectContribution: New onset depression for Example for GIN 2022

-0.16 (-0.23 to -0.13)

NetEffectContribution: Nonfatal myocardial infarction or stroke for Example for GIN 2022

0.91 (0.47 to 1.27)

NetEffectContribution: Remission of diabetes for Example for GIN 2022

2.15 (1.33 to 3.26) - example showing statistic.extension:modelExpression

NetEffectContribution: Treatment with opioids for Example for GIN 2022

-0.24 (-0.32 to -0.16)

NetEffectContributionList: Bariatric Surgery Example for GIN 2022

A list of Evidence Resources (NetEffectContribution Profile) used to provide the group members for a NetEffectContributions Profile.

NetEffectContributions_Bariatric_Surgery_Example_for_GIN_2022

This is an example of a NetEffectContributions Profile of a Group Resource. This is a conceptual group (membership = ‘conceptual’) where the type of group member is an Evidence Resource (NetEffectContribution Profile) and this type is not supported in the type element so the type element is not used. The characteristic is defined by reference to a NetEffectContributionList Profile of List Resource where the ‘group members’ can be found.

NetEffectEstimate: Bariatric Surgery Example for GIN 2022

Net Effect Estimate = 3.55 (2.38 to 4.73)

Norwegian Cohort Study Comparing Bariatric Surgery vs Medical Obesity Treatment for Long-term Medical Complications and Obesity-Related Comorbidities

The main purpose of this study is, in combination with data from the Register and Biobank study and follow-up data from the Norwegian Prescription Database, to compare the long-term effects (4-10 years) of surgical and non-surgical treatment of morbid obesity on obesity related comorbidities by studying changes in medicine usage after treatment.

Hypotheses

  1. Primary hypothesis: As compared to non-surgical treatment, bariatric surgery will be associated with higher rates of remission, and lower rates of new-onset drug treated hypertension during a follow-up period of ≤ 10 years.
  2. Secondary hypotheses: Changes in the usage of other drugs, particularly drugs related to obesity related comorbidities, will differ significantly between patients undergoing bariatric surgery or non-surgical treatment during the follow-up period.
Organ support-free days

The primary outcome was organ support–free days, evaluated on an ordinal scale that combined in-hospital death and the number of days free of cardiovascular or respiratory organ support up to day 21 among patients who survived to hospital discharge. Patients who were discharged from the hospital before day 21 were assumed to be alive and free of organ support through day 21. Any death during the index hospitalization through 90 days was assigned the worst score on the outcome scale (–1). This end point reflects both the use of ICU-level interventions and survival, with higher values indicating better outcomes.

Outcome Importance Rating 100 of All-cause mortality

This example expresses the outcome desirability with a CodeableConcept datatype and the relative outcome importance (100%) with a Quantity datatype.

Outcome Importance Rating 30 of Nonfatal myocardial infarction or stroke

This example expresses the outcome desirability with a CodeableConcept datatype and the relative outcome importance (30%) with a Quantity datatype.

Outcome Importance Rating 5 of New onset depression

This example expresses the outcome desirability with a CodeableConcept datatype and the relative outcome importance (5%) with a Quantity datatype.

Outcome Importance Rating 5 of Remission of diabetes

This example expresses the outcome desirability with a CodeableConcept datatype and the relative outcome importance (5%) with a Quantity datatype

Outcome Importance Rating 5 of Treatment with opioids

This example expresses the outcome desirability with a CodeableConcept datatype and the relative outcome importance (5%) with a Quantity datatype.

Outcome Importance Rating 8 of Additional GI surgical procedure

This example expresses the outcome desirability with a CodeableConcept datatype and the relative outcome importance (8%) with a Quantity datatype.

OutcomeDefinition_American_Diabetes_Association_composite_triple_end_point_for_metabolic_control

The American Diabetes Association composite triple end point of hemoglobin A1c less than 7.0%, low-density lipoprotein cholesterol less than 100 mg/dL, and systolic blood pressure less than 130 mm Hg at 5 years

OutcomeDefinition_Diabetes_in_remission

Diabetes in remission

OutcomeDefinition_HbA1c_at_12_months

HbA1c at 12 months

OutcomeDefinition_HbA1c_at_24_months

HbA1c at 24 months

OutcomeDefinition_HbA1c_at_36_months

HbA1c at 36 months

OutcomeDefinition_HbA1c_at_60_months

HbA1c at 60 months

OutcomeDefinition_HbA1c_at_6_months

HbA1c at 6 months

OutcomeDefinition_New_onset_depression

New onset depression

OutcomeDefinition_Nonfatal_myocardial_infarction_or_stroke

Nonfatal myocardial infarction or stroke

OutcomeList: Clinical Outcomes for Effects of Bariatric Surgery

A list of EvidenceVariable Resources (OutcomeVariable Profile) used to provide the value of a characteristic for a ComparativeEvidenceReportSubject Profile.

OutcomeVariable: American Diabetes Association composite triple end point for metabolic control at 5 years

The American Diabetes Association composite triple end point of hemoglobin A1c less than 7.0%, low-density lipoprotein cholesterol less than 100 mg/dL, and systolic blood pressure less than 130 mm Hg at 5 years

OutcomeVariable: HbA1c at 12 months

HbA1c at 12 months

OutcomeVariable: HbA1c at 24 months

HbA1c at 24 months

OutcomeVariable: HbA1c at 36 months

HbA1c at 36 months

OutcomeVariable: HbA1c at 6 months

HbA1c at 6 months

OutcomeVariable: HbA1c at 60 months

HbA1c at 60 months

OutcomeVariable: Mean difference in HbA1c between Surgery and Medical/Lifestyle groups at end of follow-up

Mean difference in HbA1c between Surgery and Medical/Lifestyle groups at end of follow-up for HbA1c end point

OutcomeVariable: New onset depression

This example expresses the variable ‘New onset depression’ as a dichotomous variable with a definition using definition.reference which references an OutcomeDefinition Profile of Group Resource.

OutcomeVariable: Nonfatal myocardial infarction or stroke

Nonfatal myocardial infarction or stroke

OutcomeVariable: Remission of diabetes

This example expresses the variable ‘Remission of diabetes’ as a dichotomous variable with a definition using both definition.concept (for a SNOMED CT term) and definition.reference which references an OutcomeDefinition Profile of Group Resource.

OutcomeVariable_Additional_GI_surgical_procedure

This example expresses the variable ‘Additional GI surgical procedure’ as a dichotomous variable with a simple definition using definition.concept.text

OutcomeVariable_All_cause_mortality

A dichotomous variable (outcome measure) defined by CodeableConcept.

OutcomeVariable_Treatment_with_opioids

This example expresses the variable ‘Treatment with opioids’ as a dichotomous variable with a simple definition using definition.concept.text

ParticipantFlow: 2018 Norwegian Cohort Excluded from Analysis

221 excluded from analysis

ParticipantFlow: 2018 Norwegian Cohort Included in Analysis

1888 included in analysis

ParticipantFlow: 2018 Norwegian Cohort Medical Group Included in Analysis

956 included in analysis

ParticipantFlow: 2018 Norwegian Cohort Surgical Group Included in Analysis

932 included in analysis

ParticipantFlowMeasure: Dropout due to stopping intervention

Dropout due to stopping intervention

ParticipantFlowMeasure: Exclusion from analysis

This example expresses the variable ‘Excluded from analysis’ as a dichotomous variable with a simple definition using definition.concept.text and is used with the ParticipantFlow Profile of Evidence in the Evidence.variableDefinition with variableRole=’outcome’

ParticipantFlowMeasure: Inclusion in analysis

This example expresses the variable ‘Inclusion in analysis’ as a dichotomous variable with a simple definition using definition.concept.text and is used with the ParticipantFlow Profile of Evidence in the Evidence.variableDefinition with variableRole=’outcome’

Participants_in_Anticoagulation_for_COVID_19_Combined_ATTACC_ACTIV_4a_and_REMAP_CAP_RCT_hospitalized_not_critically_ill

An enumerated group participating in a randomized trial.

Patients_who_are_hospitalized_for_COVID_19_and_who_are_not_critically_ill

An definitional group used to support the ‘intended’ element in Evidence.varaibleDefinition with variableRole = ‘population’.

Placebo

Placebo

PlanDefinition for Recommendation: ADA Obesity Management Recommendation 8.16

8.16 Metabolic surgery should be a recommended option to treat type 2 diabetes in screened surgical candidates with BMI ≥40 kg/m2 (BMI ≥37.5 kg/m2 in Asian Americans) and in adults with BMI 35.0–39.9 kg/m2 (32.5–37.4 kg/m2 in Asian Americans) who do not achieve durable weight loss and improvement in comorbidities (including hyperglycemia) with nonsurgical methods. A

PlanDefinition for Recommendation: ADA Obesity Management Recommendation 8.17

8.17 Metabolic surgery may be considered as an option to treat type 2 diabetes in adults with BMI 30.0–34.9 kg/m2 (27.5–32.4 kg/m2 in Asian Americans) who do not achieve durable weight loss and improvement in comorbidities (including hyperglycemia) with nonsurgical methods. A

PreprintCitation: Nigella Sativa for COVID-19 OSF Preprint

A preprint that has only an abstract and data is different than CT.gov results

Recommendation Justification Code System

This resource (this entire set of content) is being used for active development of a code system to support a RecommendationJustification Profile of ArtifactAssessment Resource. This code system is not yet released for expected use and may not be stable. This resource may be used for the continuous development of the code system, and published versions of the code system (when ready) may be published as separate resources with stable identifiers.

Recommendation: ADA Obesity Management Recommendation 8.16

Example of Recommendation Profile of Composition Resource.

Recommendation: ADA Obesity Management Recommendation 8.16-adapted

This example of adapting a Recommendation (removing the A from the end of the Recommendation Statement) shows the use of an Adaptation Profile of ArtifactAssessment and the use of the extensions: artifact-approvalDate, arifact-lastReviewDate, and artifact-effectivePeriod.

Recommendation: ADA Obesity Management Recommendation 8.17

Example of Recommendation Profile of Composition Resource.

Remdesivir

Remdesivir

Remdesivir_IV_200_mg_once_then_100_mg_once_daily_for_9_days

Remdesivir IV 200 mg once then 100 mg once daily for 9 days

Risk Of Bias Type Value Set

Types of bias for use with risk of bias assessment. This is a snapshot version from a code system in development (original source at https://fevir.net/resources/CodeSystem/27270) and is provided for example support in the EBMonFHIR Implementation Guide.

Risk of Bias Assessment of Critically appraised summary of primary outcome of multi-platform RCT of anticoagulation for non-critically ill patients with COVID-19

The ArtifactAssessment Resource is used here to show a complex risk of bias assessment with multiple recursive components.

Scientific Evidence Code System (SEVCO) -- EXAMPLE VERSION for EBMonFHIR Implementation Guide

This code system was copied as a snapshot from the version being used for active development of the Scientific Evidence Code System (SEVCO). This code system is not yet released for expected use and may not be stable. This resource may be used for supporting the examples in the EBMonFHIR Implementation Guide, and published versions of the code system (when ready) will be published as separate resources with stable identifiers.

SearchResults: PubMed search for Wonder Woman

Example of searching for ‘Wonder Woman’ in titles and abstracts in PubMed

SearchStrategy_PubMed_and_Embase_search_for_van_Veldhuisen_2022_systematic_review

We conducted a search in Pubmed and Embase databases from inception to 28 August 2021. The search strategy composed the PICO method: patients of interest were obese, adult (age ≥18 years old) patients, Intervention was bariatric surgery, Controls were obese patients who did not undergo bariatric surgery, and Outcomes were defined as all-cause mortality, CV mortality, and incidence of CV disease, i.e. incident AF, incident HF, incident myocardial infarction, incident stroke, and incident aortic stenosis. Further, for clarity reasons we investigated myocardial infarction, and not incident coronary artery disease, because it is very difficult if not impossible to define its onset, also this was not uniform across the studies. Somewhat similarly, we investigated stroke and not incident cerebrovascular disease. A few studies, however, further differentiated between ischaemic vs. haemorrhagic stroke, and thus we also separately investigated the effect on ischaemic stroke.

SearchStrategy_PubMed_search_for_Wonder_Woman

Example of searching for “Wonder Woman” in titles and abstracts in PubMed

Severely_Obese_Adults_2018_Norwegian_Cohort

Cohort study with baseline data of exposures from November 2005 through July 2010 and follow-up data from 2006 until death or through December 2015 at a tertiary care outpatient center, Vestfold Hospital Trust, Norway. Consecutive treatment-seeking adult patients (n = 2109) with severe obesity assessed (221 patients excluded and 1888 patients included).

SoaPlanDefinition: Follow-up assessment 3 months after study start

Example of Schedule of Activities with follow-up assessment 3 months after study start

SoftwareCitation: Computable Publishing®: ClinicalTrials.gov-to-FEvIR Converter

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

StudyCitation: 2022 Systematic Review of bariatric surgery mortality effect 35243488

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.

StudyEligibilityCriteria_Eligibility_Criteria_for_Bariatric_Surgery_Randomized_Trial_Diabetes_Surgery_Study

Inclusion Criteria: Age 30 to 67 years at eligibility visit. Diagnosed with T2DM at least 6 months prior to enrollment, under the active care of a doctor for at least the six months prior to enrollment, and HbA1c ≥ 8.0%. Body Mass Index (BMI) ≥ 30.0 kg/m2 and ≤ 39.9 kg/m2 at eligibility visit. Willingness to accept random assignment to either treatment group. Expect to live or work within approximately one hour’s traveling time from the study clinic for the duration of the two-year trial. Willingness to comply with the follow-up protocol and successful completion of the run-in. Written informed consent. ///// Exclusion Criteria: Cardiovascular event (myocardial infarction, acute coronary syndrome, coronary artery angioplasty or bypass, stroke) in the past six months. Current evidence of congestive heart failure, angina pectoris, or symptomatic peripheral vascular disease. Cardiac stress test indicating that surgery or IMM would not be safe. Pulmonary embolus or thrombophlebitis in the past six months. Cancer of any kind (except basal cell skin cancer or cancer in situ) unless documented to be disease-free for five years. Significant anemia (hemoglobin 1.0 g or more below normal range) or history of coagulopathy. Serum creatinine ≥ 1.5 mg/dl. HbA1c > 14.0%.

StudyEligibilityCriteria_Eligibility_Criteria_for_DIBASY_Trial

Patients aged 30-60 years with a body-mass index of 35 kg/m(2) or more and a history of type 2 diabetes lasting at least 5 years

StudyEligibilityCriteria_Obese_patients_18_years_old

obese, adult (age ≥18 years old) patients

StudyGroup_Bariatric_Surgery_Trial_Enrollment_Group

An enumerated group with a single characteristic referencing the StudyEligibilityCriteria.

StudyGroup_DIBASY_Trial_Enrollment_Group

An enumerated group with a single characteristic referencing the StudyEligibilityCriteria.

SummaryOfFindings: Bariatric Surgery Summary of Findings Example for GIN 2022

Example of SummaryOfFindings Profile of Composition Resource.

SummaryOfNetEffect: Bariatric Surgery Summary of Net Effect Contributions Example for GIN 2022

Example of SummaryOfNetEffect Profile of Composition Resource.

SystematicReviewEligibilityCriteria_ADT_and_Docetaxel_vs_ADT_alone_for_metastatic_hormone_naive_prostate_cancer

Study selection criteria Types of Studies. Randomized controlled clinical trials (RCTs) with parallel design that compared the association of ADT and chemotherapy (docetaxel), versus ADT alone.

Types of participants. Patients aged ≥18 years with cytological or histological diagnosis of mHNPC.

SystematicReviewExcludedStudies: ADT and Docetaxel vs. ADT alone for metastatic hormone-naive prostate cancer

11 excluded studies

SystematicReviewIncludedStudies: ADT and Docetaxel vs. ADT alone for metastatic hormone-naive prostate cancer

3 included studies

Therapeutic-dose anticoagulation with heparin

Therapeutic-dose anticoagulation with unfractionated or low-molecular-weight heparin was administered according to local protocols for the treatment of acute venous thromboembolism for up to 14 days or until recovery; the latter was defined as hospital discharge or a discontinuation of supplemental oxygen for at least 24 hours.

Type_2_diabetes_and_elevated_BMI_in_2016_meta_analysis

A conceptual group with 2 characteristics for study participant eligibility criteria that were used for a meta-analysis.

WebPageCitation: A HEvKA Update Summary

This Citation Resource is referenced in an example for the EBMonFHIR Implementation Guide.