PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions
| Official URL: https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ValueSet/microbiology-nucleic-acid-vs | Version: 0.1.0-ci-build | |||
| Draft as of 2026-09-28 | Computable Name: MicrobiologyNucleicAcidVS | |||
LOINC codes for qualitative viral DNA detection in the PROTECT-CHILD microbiology table.
References
This value set includes codes based on the following rules:
http://loinc.org version Not Stated (use latest from terminology server)| Code | Display |
| 5002-1 | Epstein Barr virus DNA [Presence] in Blood by NAA with probe detection |
| 4996-5 | Cytomegalovirus DNA [Presence] in Blood by NAA with probe detection |
| 50348-2 | Parvovirus B19 DNA [Presence] in Blood by NAA with probe detection |
| 75543-9 | Parvovirus B19 DNA [Presence] in Plasma from Donor by NAA with probe detection |
| 86511-3 | Adenovirus DNA [Presence] in Blood by NAA with probe detection |
| 63475-8 | BK virus DNA [Presence] in Blood |
| 33978-8 | BK virus DNA [Presence] in Urine by NAA with probe detection |
| 47251-4 | BK virus DNA [Presence] in Specimen by NAA with probe detection |
https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/microbiology-cs version 📦0.1.0-ci-build
| Code | Display | Definition |
| bkv-dna-ish-tissue | BK virus DNA [Presence] in Tissue by in situ hybridization | BK polyomavirus DNA detected in tissue (e.g. kidney allograft biopsy) by (fluorescence) in situ hybridisation. No LOINC code exists. |
Expansion from tx.fhir.org based on:
This value set contains 9 concepts
| System | Code | Display (en) | Definition | JSON | XML |
http://loinc.org | 5002-1 | Epstein Barr virus DNA [Presence] in Blood by NAA with probe detection | |||
http://loinc.org | 4996-5 | Cytomegalovirus DNA [Presence] in Blood by NAA with probe detection | |||
http://loinc.org | 50348-2 | Parvovirus B19 DNA [Presence] in Blood by NAA with probe detection | |||
http://loinc.org | 75543-9 | Parvovirus B19 DNA [Presence] in Plasma from Donor by NAA with probe detection | |||
http://loinc.org | 86511-3 | Adenovirus DNA [Presence] in Blood by NAA with probe detection | |||
http://loinc.org | 63475-8 | BK virus DNA [Presence] in Blood | |||
http://loinc.org | 33978-8 | BK virus DNA [Presence] in Urine by NAA with probe detection | |||
http://loinc.org | 47251-4 | BK virus DNA [Presence] in Specimen by NAA with probe detection | |||
https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/microbiology-cs | bkv-dna-ish-tissue | BK virus DNA [Presence] in Tissue by in situ hybridization | BK polyomavirus DNA detected in tissue (e.g. kidney allograft biopsy) by (fluorescence) in situ hybridisation. No LOINC code exists. |
Explanation of the columns that may appear on this page:
| Level | A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies |
| System | The source of the definition of the code (when the value set draws in codes defined elsewhere) |
| Code | The code (used as the code in the resource instance) |
| Display | The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application |
| Definition | An explanation of the meaning of the concept |
| Comments | Additional notes about how to use the code |