PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

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: Microbiology Nucleic Acid Detection Tests - XML Representation

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<ValueSet xmlns="http://hl7.org/fhir">
  <id value="microbiology-nucleic-acid-vs"/>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet microbiology-nucleic-acid-vs</b></p><a name="microbiology-nucleic-acid-vs"> </a><a name="hcmicrobiology-nucleic-acid-vs"> </a><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <a href="http://loinc.org"><code>http://loinc.org</code></a><span title="Version is not explicitly stated. No matching Code System found"> version Not Stated (use latest from terminology server)</span><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="https://loinc.org/5002-1/">5002-1</a></td><td>Epstein Barr virus DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/4996-5/">4996-5</a></td><td>Cytomegalovirus DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/50348-2/">50348-2</a></td><td>Parvovirus B19 DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/75543-9/">75543-9</a></td><td>Parvovirus B19 DNA [Presence] in Plasma from Donor by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/86511-3/">86511-3</a></td><td>Adenovirus DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/63475-8/">63475-8</a></td><td>BK virus DNA [Presence] in Blood</td></tr><tr><td><a href="https://loinc.org/33978-8/">33978-8</a></td><td>BK virus DNA [Presence] in Urine by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/47251-4/">47251-4</a></td><td>BK virus DNA [Presence] in Specimen by NAA with probe detection</td></tr></table></li><li>Include these codes as defined in <a href="CodeSystem-microbiology-cs.html"><code>https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/microbiology-cs</code></a><span title="Version is not explicitly stated, which means it is fixed to the version provided in this specification"> version &#x1F4E6;0.1.0-ci-build</span><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href="CodeSystem-microbiology-cs.html#microbiology-cs-bkv-dna-ish-tissue">bkv-dna-ish-tissue</a></td><td style="color: #cccccc">BK virus DNA [Presence] in Tissue by in situ hybridization</td><td>BK polyomavirus DNA detected in tissue (e.g. kidney allograft biopsy) by (fluorescence) in situ hybridisation. No LOINC code exists.</td></tr></table></li></ul></div>
  </text>
  <url
       value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ValueSet/microbiology-nucleic-acid-vs"/>
  <version value="0.1.0-ci-build"/>
  <name value="MicrobiologyNucleicAcidVS"/>
  <title value="Microbiology Nucleic Acid Detection Tests"/>
  <status value="draft"/>
  <experimental value="true"/>
  <date value="2026-09-28T06:51:47+00:00"/>
  <publisher value="Protect Child"/>
  <contact>
    <name value="Protect Child"/>
    <telecom>
      <system value="url"/>
      <value value="https://protect-child.eu/"/>
    </telecom>
  </contact>
  <description
               value="LOINC codes for qualitative viral DNA detection in the PROTECT-CHILD microbiology table."/>
  <compose>
    <include>
      <system value="http://loinc.org"/>
      <concept>
        <code value="5002-1"/>
        <display
                 value="Epstein Barr virus DNA [Presence] in Blood by NAA with probe detection"/>
      </concept>
      <concept>
        <code value="4996-5"/>
        <display
                 value="Cytomegalovirus DNA [Presence] in Blood by NAA with probe detection"/>
      </concept>
      <concept>
        <code value="50348-2"/>
        <display
                 value="Parvovirus B19 DNA [Presence] in Blood by NAA with probe detection"/>
      </concept>
      <concept>
        <code value="75543-9"/>
        <display
                 value="Parvovirus B19 DNA [Presence] in Plasma from Donor by NAA with probe detection"/>
      </concept>
      <concept>
        <code value="86511-3"/>
        <display
                 value="Adenovirus DNA [Presence] in Blood by NAA with probe detection"/>
      </concept>
      <concept>
        <code value="63475-8"/>
        <display value="BK virus DNA [Presence] in Blood"/>
      </concept>
      <concept>
        <code value="33978-8"/>
        <display
                 value="BK virus DNA [Presence] in Urine by NAA with probe detection"/>
      </concept>
      <concept>
        <code value="47251-4"/>
        <display
                 value="BK virus DNA [Presence] in Specimen by NAA with probe detection"/>
      </concept>
    </include>
    <include>
      <system
              value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/microbiology-cs"/>
      <concept>
        <code value="bkv-dna-ish-tissue"/>
      </concept>
    </include>
  </compose>
</ValueSet>