PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: Microbiology Nucleic Acid Detection Tests - JSON Representation

Raw json | Download

{
  "resourceType" : "ValueSet",
  "id" : "microbiology-nucleic-acid-vs",
  "text" : {
    "status" : "extensions",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet microbiology-nucleic-acid-vs</b></p><a name=\"microbiology-nucleic-acid-vs\"> </a><a name=\"hcmicrobiology-nucleic-acid-vs\"> </a><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><span title=\"Version is not explicitly stated. No matching Code System found\"> version Not Stated (use latest from terminology server)</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/5002-1/\">5002-1</a></td><td>Epstein Barr virus DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/4996-5/\">4996-5</a></td><td>Cytomegalovirus DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/50348-2/\">50348-2</a></td><td>Parvovirus B19 DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/75543-9/\">75543-9</a></td><td>Parvovirus B19 DNA [Presence] in Plasma from Donor by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/86511-3/\">86511-3</a></td><td>Adenovirus DNA [Presence] in Blood by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/63475-8/\">63475-8</a></td><td>BK virus DNA [Presence] in Blood</td></tr><tr><td><a href=\"https://loinc.org/33978-8/\">33978-8</a></td><td>BK virus DNA [Presence] in Urine by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/47251-4/\">47251-4</a></td><td>BK virus DNA [Presence] in Specimen by NAA with probe detection</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-microbiology-cs.html\"><code>https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/microbiology-cs</code></a><span title=\"Version is not explicitly stated, which means it is fixed to the version provided in this specification\"> version &#x1F4E6;0.1.0-ci-build</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href=\"CodeSystem-microbiology-cs.html#microbiology-cs-bkv-dna-ish-tissue\">bkv-dna-ish-tissue</a></td><td style=\"color: #cccccc\">BK virus DNA [Presence] in Tissue by in situ hybridization</td><td>BK polyomavirus DNA detected in tissue (e.g. kidney allograft biopsy) by (fluorescence) in situ hybridisation. No LOINC code exists.</td></tr></table></li></ul></div>"
  },
  "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ValueSet/microbiology-nucleic-acid-vs",
  "version" : "0.1.0-ci-build",
  "name" : "MicrobiologyNucleicAcidVS",
  "title" : "Microbiology Nucleic Acid Detection Tests",
  "status" : "draft",
  "experimental" : true,
  "date" : "2026-09-28T06:51:47+00:00",
  "publisher" : "Protect Child",
  "contact" : [
    {
      "name" : "Protect Child",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://protect-child.eu/"
        }
      ]
    }
  ],
  "description" : "LOINC codes for qualitative viral DNA detection in the PROTECT-CHILD microbiology table.",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
          {
            "code" : "5002-1",
            "display" : "Epstein Barr virus DNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "4996-5",
            "display" : "Cytomegalovirus DNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "50348-2",
            "display" : "Parvovirus B19 DNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "75543-9",
            "display" : "Parvovirus B19 DNA [Presence] in Plasma from Donor by NAA with probe detection"
          },
          {
            "code" : "86511-3",
            "display" : "Adenovirus DNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "63475-8",
            "display" : "BK virus DNA [Presence] in Blood"
          },
          {
            "code" : "33978-8",
            "display" : "BK virus DNA [Presence] in Urine by NAA with probe detection"
          },
          {
            "code" : "47251-4",
            "display" : "BK virus DNA [Presence] in Specimen by NAA with probe detection"
          }
        ]
      },
      {
        "system" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/microbiology-cs",
        "concept" : [
          {
            "code" : "bkv-dna-ish-tissue"
          }
        ]
      }
    ]
  }
}