PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

• Content
• Detailed Descriptions
• Mappings
• XML
• JSON
• TTL

Logical Model: BioSample logical model

Logical model for the PROTECT-CHILD bio_sample table.

Usages:

• This Logical Model is not used by any profiles in this Specification

You can also check for usages in the FHIR IG Statistics

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

• Key Elements Table
• Differential Table
• Snapshot Table
• Statistics/References
• All

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
pcBioSampleLm		0..*	Base	BioSample logical model
bioSampleId	O	1..1	string	bio_sample_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
visitId	O	1..1	Reference(Visit logical model)	visit_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
collectionDate	O	0..1	date	collection_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
sendIngemmDate	O	0..1	date	send_ingemm_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
genomicSample	O	0..1	boolean	genomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
epigenomicSample	O	0..1	boolean	epigenomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
Documentation for this format

This structure is derived from Base

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
pcBioSampleLm		0..*	Base	BioSample logical model
bioSampleId	O	1..1	string	bio_sample_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
visitId	O	1..1	Reference(Visit logical model)	visit_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
collectionDate	O	0..1	date	collection_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
sendIngemmDate	O	0..1	date	send_ingemm_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
genomicSample	O	0..1	boolean	genomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
epigenomicSample	O	0..1	boolean	epigenomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
Documentation for this format

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
pcBioSampleLm		0..*	Base	BioSample logical model
bioSampleId	O	1..1	string	bio_sample_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
visitId	O	1..1	Reference(Visit logical model)	visit_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
collectionDate	O	0..1	date	collection_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
sendIngemmDate	O	0..1	date	send_ingemm_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
genomicSample	O	0..1	boolean	genomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
epigenomicSample	O	0..1	boolean	epigenomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(2 nested mandatory elements)

Structures

This structure refers to these other structures:

• Visit logical model (https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcVisitLm)

Key Elements View

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
pcBioSampleLm		0..*	Base	BioSample logical model
bioSampleId	O	1..1	string	bio_sample_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
visitId	O	1..1	Reference(Visit logical model)	visit_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
collectionDate	O	0..1	date	collection_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
sendIngemmDate	O	0..1	date	send_ingemm_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
genomicSample	O	0..1	boolean	genomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
epigenomicSample	O	0..1	boolean	epigenomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
Documentation for this format

Differential View

This structure is derived from Base

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
pcBioSampleLm		0..*	Base	BioSample logical model
bioSampleId	O	1..1	string	bio_sample_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
visitId	O	1..1	Reference(Visit logical model)	visit_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
collectionDate	O	0..1	date	collection_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
sendIngemmDate	O	0..1	date	send_ingemm_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
genomicSample	O	0..1	boolean	genomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
epigenomicSample	O	0..1	boolean	epigenomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
Documentation for this format

Snapshot View

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
pcBioSampleLm		0..*	Base	BioSample logical model
bioSampleId	O	1..1	string	bio_sample_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
visitId	O	1..1	Reference(Visit logical model)	visit_id Obligations Actor SHALL:populate Liver transplant data source SHALL:populate Kidney transplant data source
collectionDate	O	0..1	date	collection_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
sendIngemmDate	O	0..1	date	send_ingemm_date Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
genomicSample	O	0..1	boolean	genomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
epigenomicSample	O	0..1	boolean	epigenomic_sample Obligations Actor SHOULD:populate-if-known Liver transplant data source SHOULD:populate-if-known Kidney transplant data source
Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(2 nested mandatory elements)

Structures

This structure refers to these other structures:

• Visit logical model (https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcVisitLm)

Other representations of profile: CSV, Excel