PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions
| Draft as of 2026-09-28 |
XML representation of the pcBioSampleLm logical model.
<StructureDefinition xmlns="http://hl7.org/fhir">
<id value="pcBioSampleLm"/>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: StructureDefinition pcBioSampleLm</b></p><table border="0" cellpadding="0" cellspacing="0" style="border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;"><tr style="border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top"><th style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; padding-top: 3px; padding-bottom: 3px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="The logical name of the element">Name</a></th><th style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; padding-top: 3px; padding-bottom: 3px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Information about the use of the element">Flags</a></th><th style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; padding-top: 3px; padding-bottom: 3px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Minimum and Maximum # of times the element can appear in the instance">Card.</a></th><th style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; padding-top: 3px; padding-bottom: 3px; width: 100px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Reference to the type of the element">Type</a></th><th style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; padding-top: 3px; padding-bottom: 3px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Additional information about the element">Description & Constraints</a><span style="float: right"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Legend for this format"><img src="data:image/png;base64,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" alt="doco" style="background-color: inherit"/></a></span></th></tr><tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_element.gif" alt="." style="background-color: white; background-color: inherit" title="Element" class="hierarchy"/> <a href="StructureDefinition-pcBioSampleLm-definitions.html#pcBioSampleLm" title="Logical model for the PROTECT-CHILD bio_sample table.">pcBioSampleLm</a><a name="pcBioSampleLm"> </a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="opacity: 0.5">0</span><span style="opacity: 0.5">..</span><span style="opacity: 0.5">*</span></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://build.fhir.org/types.html#Base">Base</a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">BioSample logical model</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-pcBioSampleLm-definitions.html#pcBioSampleLm.bioSampleId" title="Bio sample ID.">bioSampleId</a><a name="pcBioSampleLm.bioSampleId"> </a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: white; background-color: #D50000" title="This element has obligations">O</span></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">1..1</td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#string">string</a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">bio_sample_id<table class="obligation grid"><tr><td style="font-size: 11px"><b>Obligations</b></td><td style="font-size: 11px"><b>Actor</b></td></tr><tr><td style="font-size: 11px"><b>SHALL</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate" title="Obligation Codes: populate">populate</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-liver.html">Liver transplant data source</a></td></tr><tr><td style="font-size: 11px"><b>SHALL</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate" title="Obligation Codes: populate">populate</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-kidney.html">Kidney transplant data source</a></td></tr></table></td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_reference.png" alt="." style="background-color: white; background-color: inherit" title="Reference to another Resource" class="hierarchy"/> <a href="StructureDefinition-pcBioSampleLm-definitions.html#pcBioSampleLm.visitId" title="FK to visit.">visitId</a><a name="pcBioSampleLm.visitId"> </a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: white; background-color: #D50000" title="This element has obligations">O</span></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">1..1</td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/references.html">Reference</a>(<a href="StructureDefinition-pcVisitLm.html">Visit logical model</a>)</td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">visit_id<table class="obligation grid"><tr><td style="font-size: 11px"><b>Obligations</b></td><td style="font-size: 11px"><b>Actor</b></td></tr><tr><td style="font-size: 11px"><b>SHALL</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate" title="Obligation Codes: populate">populate</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-liver.html">Liver transplant data source</a></td></tr><tr><td style="font-size: 11px"><b>SHALL</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate" title="Obligation Codes: populate">populate</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-kidney.html">Kidney transplant data source</a></td></tr></table></td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-pcBioSampleLm-definitions.html#pcBioSampleLm.collectionDate" title="Sample collection date.">collectionDate</a><a name="pcBioSampleLm.collectionDate"> </a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: white; background-color: #D50000" title="This element has obligations">O</span></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#date">date</a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">collection_date<table class="obligation grid"><tr><td style="font-size: 11px"><b>Obligations</b></td><td style="font-size: 11px"><b>Actor</b></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-liver.html">Liver transplant data source</a></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-kidney.html">Kidney transplant data source</a></td></tr></table></td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-pcBioSampleLm-definitions.html#pcBioSampleLm.sendIngemmDate" title="Date sample sent to INGEMM.">sendIngemmDate</a><a name="pcBioSampleLm.sendIngemmDate"> </a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: white; background-color: #D50000" title="This element has obligations">O</span></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#date">date</a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">send_ingemm_date<table class="obligation grid"><tr><td style="font-size: 11px"><b>Obligations</b></td><td style="font-size: 11px"><b>Actor</b></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-liver.html">Liver transplant data source</a></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-kidney.html">Kidney transplant data source</a></td></tr></table></td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-pcBioSampleLm-definitions.html#pcBioSampleLm.genomicSample" title="Sample used for genomic analysis.">genomicSample</a><a name="pcBioSampleLm.genomicSample"> </a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: white; background-color: #D50000" title="This element has obligations">O</span></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">genomic_sample<table class="obligation grid"><tr><td style="font-size: 11px"><b>Obligations</b></td><td style="font-size: 11px"><b>Actor</b></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-liver.html">Liver transplant data source</a></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-kidney.html">Kidney transplant data source</a></td></tr></table></td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin_end.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-pcBioSampleLm-definitions.html#pcBioSampleLm.epigenomicSample" title="Sample used for epigenomic analysis.">epigenomicSample</a><a name="pcBioSampleLm.epigenomicSample"> </a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="padding-left: 3px; padding-right: 3px; color: white; background-color: #D50000" title="This element has obligations">O</span></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : var(--ig-left,left); background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">epigenomic_sample<table class="obligation grid"><tr><td style="font-size: 11px"><b>Obligations</b></td><td style="font-size: 11px"><b>Actor</b></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-liver.html">Liver transplant data source</a></td></tr><tr><td style="font-size: 11px"><b>SHOULD</b>:<a href="http://hl7.org/fhir/extensions/5.3.0/CodeSystem-obligation.html#obligation-populate-if-known" title="Obligation Codes: populate if known">populate-if-known</a></td><td style="font-size: 11px; opacity: 0.5;"><a href="ActorDefinition-pc-actor-kidney.html">Kidney transplant data source</a></td></tr></table></td></tr>
<tr><td colspan="5" class="hierarchy"><br/><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Legend for this format"><img src="data:image/png;base64,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" alt="doco" style="background-color: inherit"/> Documentation for this format</a></td></tr></table></div>
</text>
<url
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm"/>
<version value="0.1.0-ci-build"/>
<name value="PcBioSample"/>
<title value="BioSample logical model"/>
<status value="draft"/>
<date value="2026-09-28T06:51:47+00:00"/>
<publisher value="Protect Child"/>
<contact>
<name value="Protect Child"/>
<telecom>
<system value="url"/>
<value value="https://protect-child.eu/"/>
</telecom>
</contact>
<description value="Logical model for the PROTECT-CHILD bio_sample table."/>
<fhirVersion value="4.0.1"/>
<kind value="logical"/>
<abstract value="false"/>
<type
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm"/>
<baseDefinition value="http://hl7.org/fhir/StructureDefinition/Base"/>
<derivation value="specialization"/>
<snapshot>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version">
<valueString value="4.0.1"/>
</extension>
<element id="pcBioSampleLm">
<path value="pcBioSampleLm"/>
<short value="BioSample logical model"/>
<definition
value="Logical model for the PROTECT-CHILD bio_sample table."/>
<min value="0"/>
<max value="*"/>
<base>
<path value="Base"/>
<min value="0"/>
<max value="*"/>
</base>
<isModifier value="false"/>
</element>
<element id="pcBioSampleLm.bioSampleId">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<path value="pcBioSampleLm.bioSampleId"/>
<short value="bio_sample_id"/>
<definition value="Bio sample ID."/>
<min value="1"/>
<max value="1"/>
<base>
<path value="pcBioSampleLm.bioSampleId"/>
<min value="1"/>
<max value="1"/>
</base>
<type>
<code value="string"/>
</type>
</element>
<element id="pcBioSampleLm.visitId">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<path value="pcBioSampleLm.visitId"/>
<short value="visit_id"/>
<definition value="FK to visit."/>
<min value="1"/>
<max value="1"/>
<base>
<path value="pcBioSampleLm.visitId"/>
<min value="1"/>
<max value="1"/>
</base>
<type>
<code value="Reference"/>
<targetProfile
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcVisitLm"/>
</type>
</element>
<element id="pcBioSampleLm.collectionDate">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<path value="pcBioSampleLm.collectionDate"/>
<short value="collection_date"/>
<definition value="Sample collection date."/>
<min value="0"/>
<max value="1"/>
<base>
<path value="pcBioSampleLm.collectionDate"/>
<min value="0"/>
<max value="1"/>
</base>
<type>
<code value="date"/>
</type>
</element>
<element id="pcBioSampleLm.sendIngemmDate">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<path value="pcBioSampleLm.sendIngemmDate"/>
<short value="send_ingemm_date"/>
<definition value="Date sample sent to INGEMM."/>
<min value="0"/>
<max value="1"/>
<base>
<path value="pcBioSampleLm.sendIngemmDate"/>
<min value="0"/>
<max value="1"/>
</base>
<type>
<code value="date"/>
</type>
</element>
<element id="pcBioSampleLm.genomicSample">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<path value="pcBioSampleLm.genomicSample"/>
<short value="genomic_sample"/>
<definition value="Sample used for genomic analysis."/>
<min value="0"/>
<max value="1"/>
<base>
<path value="pcBioSampleLm.genomicSample"/>
<min value="0"/>
<max value="1"/>
</base>
<type>
<code value="boolean"/>
</type>
</element>
<element id="pcBioSampleLm.epigenomicSample">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
<extension
url="http://hl7.org/fhir/tools/StructureDefinition/snapshot-source">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcBioSampleLm|0.1.0-ci-build"/>
</extension>
</extension>
<path value="pcBioSampleLm.epigenomicSample"/>
<short value="epigenomic_sample"/>
<definition value="Sample used for epigenomic analysis."/>
<min value="0"/>
<max value="1"/>
<base>
<path value="pcBioSampleLm.epigenomicSample"/>
<min value="0"/>
<max value="1"/>
</base>
<type>
<code value="boolean"/>
</type>
</element>
</snapshot>
<differential>
<element id="pcBioSampleLm">
<path value="pcBioSampleLm"/>
<short value="BioSample logical model"/>
<definition
value="Logical model for the PROTECT-CHILD bio_sample table."/>
</element>
<element id="pcBioSampleLm.bioSampleId">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
</extension>
<path value="pcBioSampleLm.bioSampleId"/>
<short value="bio_sample_id"/>
<definition value="Bio sample ID."/>
<min value="1"/>
<max value="1"/>
<type>
<code value="string"/>
</type>
</element>
<element id="pcBioSampleLm.visitId">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHALL:populate"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
</extension>
<path value="pcBioSampleLm.visitId"/>
<short value="visit_id"/>
<definition value="FK to visit."/>
<min value="1"/>
<max value="1"/>
<type>
<code value="Reference"/>
<targetProfile
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pcVisitLm"/>
</type>
</element>
<element id="pcBioSampleLm.collectionDate">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
</extension>
<path value="pcBioSampleLm.collectionDate"/>
<short value="collection_date"/>
<definition value="Sample collection date."/>
<min value="0"/>
<max value="1"/>
<type>
<code value="date"/>
</type>
</element>
<element id="pcBioSampleLm.sendIngemmDate">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
</extension>
<path value="pcBioSampleLm.sendIngemmDate"/>
<short value="send_ingemm_date"/>
<definition value="Date sample sent to INGEMM."/>
<min value="0"/>
<max value="1"/>
<type>
<code value="date"/>
</type>
</element>
<element id="pcBioSampleLm.genomicSample">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
</extension>
<path value="pcBioSampleLm.genomicSample"/>
<short value="genomic_sample"/>
<definition value="Sample used for genomic analysis."/>
<min value="0"/>
<max value="1"/>
<type>
<code value="boolean"/>
</type>
</element>
<element id="pcBioSampleLm.epigenomicSample">
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-liver"/>
</extension>
</extension>
<extension url="http://hl7.org/fhir/StructureDefinition/obligation">
<extension url="code">
<valueCode value="SHOULD:populate-if-known"/>
</extension>
<extension url="actor">
<valueCanonical
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ActorDefinition/pc-actor-kidney"/>
</extension>
</extension>
<path value="pcBioSampleLm.epigenomicSample"/>
<short value="epigenomic_sample"/>
<definition value="Sample used for epigenomic analysis."/>
<min value="0"/>
<max value="1"/>
<type>
<code value="boolean"/>
</type>
</element>
</differential>
</StructureDefinition>