PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: Example Biological Sample - JSON Representation

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{
  "resourceType" : "Specimen",
  "id" : "biosample-example-1",
  "meta" : {
    "profile" : [
      🔗 "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample"
    ]
  },
  "text" : {
    "status" : "extensions",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen biosample-example-1</b></p><a name=\"biosample-example-1\"> </a><a name=\"hcbiosample-example-1\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-biosample.html\">Biological Sample</a></p></div><p><b>Sample send to INGEMM date</b>: 2025-01-20</p><p><b>Genomic Test ID Relationship</b>: <a href=\"Basic-genomic-test-example-1.html\">Basic Exome sequencing</a></p><p><b>Epigenome Study ID Relationship</b>: <a href=\"Basic-epigenome-study-example-1.html\">Basic Methylation array epigenome study</a></p><p><b>Methylomic Study ID Relationship</b>: <a href=\"Basic-methylomic-study-example-1.html\">Basic Locus-level methylomic record</a></p><p><b>DNA concentration</b>: 35.2</p><p><b>identifier</b>: <code>https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/biosample-id</code>/BS0001</p><p><b>type</b>: <span title=\"Codes:{https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/biosample-tissue-type blood}\">Peripheral blood</span></p><p><b>subject</b>: <a href=\"Patient-ExamplePatientTransplant1.html\">Anonymous Patient Female, DoB: 2015-06-15 ( https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ids/recipient#REC-001)</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td></tr><tr><td style=\"display: none\">*</td><td>2025-01-15</td></tr></table></div>"
  },
  "extension" : [
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-send-ingemm-date",
      "valueDate" : "2025-01-20"
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-genomic-test-ref",
      "valueReference" : {
        🔗 "reference" : "Basic/genomic-test-example-1"
      }
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-epigenome-study-ref",
      "valueReference" : {
        🔗 "reference" : "Basic/epigenome-study-example-1"
      }
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-methylomic-study-ref",
      "valueReference" : {
        🔗 "reference" : "Basic/methylomic-study-example-1"
      }
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-dna-concentration",
      "valueDecimal" : 35.2
    }
  ],
  "identifier" : [
    {
      "system" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/biosample-id",
      "value" : "BS0001"
    }
  ],
  "type" : {
    "coding" : [
      {
        "system" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/biosample-tissue-type",
        "code" : "blood",
        "display" : "Blood"
      }
    ],
    "text" : "Peripheral blood"
  },
  "subject" : {
    🔗 "reference" : "Patient/ExamplePatientTransplant1"
  },
  "collection" : {
    "collectedDateTime" : "2025-01-15"
  }
}