PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: Example Biological Sample - XML Representation

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<Specimen xmlns="http://hl7.org/fhir">
  <id value="biosample-example-1"/>
  <meta>
    <profile
             value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample"/>
  </meta>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: Specimen biosample-example-1</b></p><a name="biosample-example-1"> </a><a name="hcbiosample-example-1"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px"/><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-biosample.html">Biological Sample</a></p></div><p><b>Sample send to INGEMM date</b>: 2025-01-20</p><p><b>Genomic Test ID Relationship</b>: <a href="Basic-genomic-test-example-1.html">Basic Exome sequencing</a></p><p><b>Epigenome Study ID Relationship</b>: <a href="Basic-epigenome-study-example-1.html">Basic Methylation array epigenome study</a></p><p><b>Methylomic Study ID Relationship</b>: <a href="Basic-methylomic-study-example-1.html">Basic Locus-level methylomic record</a></p><p><b>DNA concentration</b>: 35.2</p><p><b>identifier</b>: <code>https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/biosample-id</code>/BS0001</p><p><b>type</b>: <span title="Codes:{https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/biosample-tissue-type blood}">Peripheral blood</span></p><p><b>subject</b>: <a href="Patient-ExamplePatientTransplant1.html">Anonymous Patient Female, DoB: 2015-06-15 ( https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ids/recipient#REC-001)</a></p><h3>Collections</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Collected[x]</b></td></tr><tr><td style="display: none">*</td><td>2025-01-15</td></tr></table></div>
  </text>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-send-ingemm-date">
    <valueDate value="2025-01-20"/>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-genomic-test-ref">
    <valueReference>🔗 
      <reference value="Basic/genomic-test-example-1"/>
    </valueReference>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-epigenome-study-ref">
    <valueReference>🔗 
      <reference value="Basic/epigenome-study-example-1"/>
    </valueReference>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-methylomic-study-ref">
    <valueReference>🔗 
      <reference value="Basic/methylomic-study-example-1"/>
    </valueReference>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/biosample-dna-concentration">
    <valueDecimal value="35.2"/>
  </extension>
  <identifier>
    <system
            value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/biosample-id"/>
    <value value="BS0001"/>
  </identifier>
  <type>
    <coding>
      <system
              value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/biosample-tissue-type"/>
      <code value="blood"/>
      <display value="Blood"/>
    </coding>
    <text value="Peripheral blood"/>
  </type>
  <subject>🔗 
    <reference value="Patient/ExamplePatientTransplant1"/>
  </subject>
  <collection>
    <collectedDateTime value="2025-01-15"/>
  </collection>
</Specimen>