PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions
| Draft as of 2026-09-28 |
<ConceptMap xmlns="http://hl7.org/fhir">
<id value="dm-imm-pat-to-omop"/>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ConceptMap dm-imm-pat-to-omop</b></p><a name="dm-imm-pat-to-omop"> </a><a name="hcdm-imm-pat-to-omop"> </a><p>This mapping does not specify any particular context of use.</p><br/><p>Mapping from <a href="CodeSystem-dm-variable-cs.html">PROTECT-CHILD Data Model Variables</a> to <a href="http://terminology.hl7.org/6.3.0/CodeSystem-OMOP.html">OHDSI Standardized Vocabularies</a></p><table class="grid"><tr><td colspan="2"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan="2"><b>Target Concept Details</b></td><td><b>Comment</b></td></tr><tr><td colspan="2"><b>Codes</b> from <a href="CodeSystem-dm-variable-cs.html" title="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/dm-variable-cs">PROTECT-CHILD Data Model Variables</a></td><td/><td colspan="2"><b>Codes</b> from <a href="http://terminology.hl7.org/6.3.0/CodeSystem-OMOP.html" title="https://fhir-terminology.ohdsi.org">OHDSI Standardized Vocabularies</a></td><td/></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">imm_pat.phase</td><td style="border-left-width: 0px; border-bottom-style: none">imm_pat.phase</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td style="border-right-width: 0px">905623</td><td style="border-left-width: 0px">Induction</td><td>OMOP OBSERVATION.qualifier_concept_id; vocabulary HemOnc.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td style="border-right-width: 0px">763393</td><td style="border-left-width: 0px">Maintenance dose</td><td>OMOP OBSERVATION.qualifier_concept_id; vocabulary SNOMED.</td></tr><tr><td style="border-right-width: 0px">imm_pat.dose</td><td style="border-left-width: 0px">imm_pat.dose</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">4162374</td><td style="border-left-width: 0px">Drug dose</td><td>OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED.</td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">imm_pat.pre_dose_level</td><td style="border-left-width: 0px; border-bottom-style: none">imm_pat.pre_dose_level</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#narrower" title="narrower">narrower</a></td><td style="border-right-width: 0px">46236053</td><td style="border-left-width: 0px">Tacrolimus [Mass/volume] in Blood --trough</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none; border-bottom-style: none"/><td style="border-left-width: 0px; border-top-style: none; border-bottom-style: none"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#narrower" title="narrower">narrower</a></td><td style="border-right-width: 0px">3042505</td><td style="border-left-width: 0px">cycloSPORINE [Mass/volume] in Blood --trough</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none; border-bottom-style: none"/><td style="border-left-width: 0px; border-top-style: none; border-bottom-style: none"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#narrower" title="narrower">narrower</a></td><td style="border-right-width: 0px">46236054</td><td style="border-left-width: 0px">Everolimus [Mass/volume] in Blood by LC/MS/MS --trough</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#narrower" title="narrower">narrower</a></td><td style="border-right-width: 0px">43055501</td><td style="border-left-width: 0px">Mycophenolate [Mass/volume] in Serum or Plasma --trough</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC.</td></tr><tr><td style="border-right-width: 0px">imm_pat.csa_2h_post_dose_level</td><td style="border-left-width: 0px">imm_pat.csa_2h_post_dose_level</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td style="border-right-width: 0px">3046333</td><td style="border-left-width: 0px">cycloSPORINE [Mass/volume] in Blood --2 hours post dose</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC.</td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">imm_pat.auc</td><td style="border-left-width: 0px; border-bottom-style: none">imm_pat.auc</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#narrower" title="narrower">narrower</a></td><td style="border-right-width: 0px">37020458</td><td style="border-left-width: 0px">Tacrolimus [AUC] in Blood</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none; border-bottom-style: none"/><td style="border-left-width: 0px; border-top-style: none; border-bottom-style: none"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#narrower" title="narrower">narrower</a></td><td style="border-right-width: 0px">1989318</td><td style="border-left-width: 0px">cycloSPORINE [AUC] in Blood</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#narrower" title="narrower">narrower</a></td><td style="border-right-width: 0px">2000000022</td><td style="border-left-width: 0px">Measured AUC for [drug]</td><td>OMOP MEASUREMENT.measurement_concept_id; vocabulary PROTECT-CHILD.</td></tr><tr><td style="border-right-width: 0px; border-bottom-style: none">imm_pat.unit</td><td style="border-left-width: 0px; border-bottom-style: none">imm_pat.unit</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td style="border-right-width: 0px">9562</td><td style="border-left-width: 0px">milligram per kilogram</td><td>OMOP OBSERVATION.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none; border-bottom-style: none"/><td style="border-left-width: 0px; border-top-style: none; border-bottom-style: none"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td style="border-right-width: 0px">9563</td><td style="border-left-width: 0px">milligram per square meter</td><td>OMOP OBSERVATION.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style="border-right-width: 0px; border-top-style: none"/><td style="border-top-style: none; border-left-width: 0px"/><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td style="border-right-width: 0px">8576</td><td style="border-left-width: 0px">milligram</td><td>OMOP OBSERVATION.unit_concept_id; vocabulary UCUM.</td></tr></table></div>
</text>
<url
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-imm-pat-to-omop"/>
<version value="0.1.0-ci-build"/>
<name value="DmImmPatToOmop"/>
<title value="DM imm_pat → OMOP"/>
<status value="draft"/>
<experimental value="false"/>
<date value="2026-09-28T06:51:47+00:00"/>
<publisher value="Protect Child"/>
<contact>
<name value="Protect Child"/>
<telecom>
<system value="url"/>
<value value="https://protect-child.eu/"/>
</telecom>
</contact>
<description
value="The OMOP concepts for each column of the DMv1.2 imm_pat table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. `equivalent`: the column's own concept; `narrower`: one of several concepts the column's values map to; `relatedto`: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary). Pending (not yet in Athena): pre_dose_level (115766-8); auc (115789-0)."/>
<group>
<source
value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/dm-variable-cs"/>
<target value="https://fhir-terminology.ohdsi.org"/>
<element>
<code value="imm_pat.phase"/>
<target>
<code value="905623"/>
<display value="Induction"/>
<equivalence value="relatedto"/>
<comment
value="OMOP OBSERVATION.qualifier_concept_id; vocabulary HemOnc."/>
</target>
<target>
<code value="763393"/>
<display value="Maintenance dose"/>
<equivalence value="relatedto"/>
<comment
value="OMOP OBSERVATION.qualifier_concept_id; vocabulary SNOMED."/>
</target>
</element>
<element>
<code value="imm_pat.dose"/>
<target>
<code value="4162374"/>
<display value="Drug dose"/>
<equivalence value="equivalent"/>
<comment
value="OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED."/>
</target>
</element>
<element>
<code value="imm_pat.pre_dose_level"/>
<target>
<code value="46236053"/>
<display value="Tacrolimus [Mass/volume] in Blood --trough"/>
<equivalence value="narrower"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."/>
</target>
<target>
<code value="3042505"/>
<display value="cycloSPORINE [Mass/volume] in Blood --trough"/>
<equivalence value="narrower"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."/>
</target>
<target>
<code value="46236054"/>
<display
value="Everolimus [Mass/volume] in Blood by LC/MS/MS --trough"/>
<equivalence value="narrower"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."/>
</target>
<target>
<code value="43055501"/>
<display
value="Mycophenolate [Mass/volume] in Serum or Plasma --trough"/>
<equivalence value="narrower"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."/>
</target>
</element>
<element>
<code value="imm_pat.csa_2h_post_dose_level"/>
<target>
<code value="3046333"/>
<display
value="cycloSPORINE [Mass/volume] in Blood --2 hours post dose"/>
<equivalence value="equivalent"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."/>
</target>
</element>
<element>
<code value="imm_pat.auc"/>
<target>
<code value="37020458"/>
<display value="Tacrolimus [AUC] in Blood"/>
<equivalence value="narrower"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."/>
</target>
<target>
<code value="1989318"/>
<display value="cycloSPORINE [AUC] in Blood"/>
<equivalence value="narrower"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC."/>
</target>
<target>
<code value="2000000022"/>
<display value="Measured AUC for [drug]"/>
<equivalence value="narrower"/>
<comment
value="OMOP MEASUREMENT.measurement_concept_id; vocabulary PROTECT-CHILD."/>
</target>
</element>
<element>
<code value="imm_pat.unit"/>
<target>
<code value="9562"/>
<display value="milligram per kilogram"/>
<equivalence value="relatedto"/>
<comment value="OMOP OBSERVATION.unit_concept_id; vocabulary UCUM."/>
</target>
<target>
<code value="9563"/>
<display value="milligram per square meter"/>
<equivalence value="relatedto"/>
<comment value="OMOP OBSERVATION.unit_concept_id; vocabulary UCUM."/>
</target>
<target>
<code value="8576"/>
<display value="milligram"/>
<equivalence value="relatedto"/>
<comment value="OMOP OBSERVATION.unit_concept_id; vocabulary UCUM."/>
</target>
</element>
</group>
</ConceptMap>