PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions
| Official URL: https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-transplant-to-omop | Version: 0.1.0-ci-build | |||
| Draft as of 2026-09-28 | Computable Name: DmTransplantToOmop | |||
The OMOP concepts for each column of the DMv1.2 transplant table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. equivalent: the column's own concept; narrower: one of several concepts the column's values map to; relatedto: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary).
This mapping does not specify any particular context of use.
Mapping from PROTECT-CHILD Data Model Variables to OHDSI Standardized Vocabularies
| Source Concept Details | Relationship | Target Concept Details | Comment | ||
| Codes from PROTECT-CHILD Data Model Variables | Codes from OHDSI Standardized Vocabularies | ||||
| transplant.d_r_weight_ratio | transplant.d_r_weight_ratio | is equivalent to | 2000000009 | Graft-to-recipient weight ratio | OMOP MEASUREMENT.measurement_concept_id; vocabulary PROTECT-CHILD. |
| transplant.vessel_mismatch_d_r | transplant.vessel_mismatch_d_r | is equivalent to | 2000000010 | Donor–recipient vessel mismatch | OMOP OBSERVATION.observation_concept_id; vocabulary PROTECT-CHILD. |
| transplant.cold_ischemia_time | transplant.cold_ischemia_time | is equivalent to | 3045879 | Cold ischemic time {Organ} | OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC. |
| is related to | 8550 | minute | OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM. | ||
| transplant.warm_ischemia_time | transplant.warm_ischemia_time | is equivalent to | 3043350 | Warm ischemic time {Organ} | OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC. |
| is related to | 8550 | minute | OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM. | ||
| transplant.tx_type | transplant.tx_type | narrower | 4076862 | Transplantation of liver | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. |
| narrower | 4322471 | Transplant of kidney | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| transplant.vascular_anomalies | transplant.vascular_anomalies | is equivalent to | 37204873 | Vascular malformation | OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED. |
| transplant.type_surgical_biliary_anastomosis | transplant.type_surgical_biliary_anastomosis | narrower | 2000000017 | Duct-to-Duct Anastomosis | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary PROTECT-CHILD. |
| narrower | 37151270 | Choledochocholedochostomy | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| narrower | 4337833 | Anastomosis of hepatic duct to gastrointestinal tract | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| narrower | 2000000018 | Hepaticocholedochostomy | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary PROTECT-CHILD. | ||
| narrower | 2000000019 | Bilioenteric Anastomosis | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary PROTECT-CHILD. | ||
| narrower | 4200500 | Roux-en-Y hepaticojejunostomy | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| transplant.intraoperative_complications | transplant.intraoperative_complications | narrower | 4308716 | Intraoperative hemorrhage | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. |
| narrower | 4132549 | Injury of bile duct | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4308537 | Injury to blood vessel during surgery | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 2000000031 | Liver ischemia | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary PROTECT-CHILD. | ||
| narrower | 4087151 | Injury of ureter | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 442553 | Injury of urinary bladder | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 42536547 | Ischemia of kidney | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| transplant.intraoperative_complications_other | transplant.intraoperative_complications_other | is equivalent to | 42538061 | Intraoperative complication | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. |
| transplant.type_ureteral_graft_anastomosis | transplant.type_ureteral_graft_anastomosis | narrower | 4023268 | Anastomosis of ureter to urinary bladder | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. |
| narrower | 2109661 | Ureteroneocystostomy; anastomosis of single ureter to bladder | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary CPT4. | ||
| narrower | 4198228 | Formation of cutaneous ureterostomy | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| narrower | 4264011 | Ureterostomy | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| narrower | 4044045 | Suprapubic cystostomy | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| transplant.other_type_ureteral_graft_anastomosis | transplant.other_type_ureteral_graft_anastomosis | is equivalent to | 4267594 | Anastomosis of ureter | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. |