PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions
| Official URL: https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-clinical-variable-to-omop | Version: 0.1.0-ci-build | |||
| Draft as of 2026-09-28 | Computable Name: DmClinicalVariableToOmop | |||
The OMOP concepts for each column of the DMv1.2 clinical_variable table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. equivalent: the column's own concept; narrower: one of several concepts the column's values map to; relatedto: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary).
This mapping does not specify any particular context of use.
Mapping from PROTECT-CHILD Data Model Variables to OHDSI Standardized Vocabularies
| Source Concept Details | Relationship | Target Concept Details | Comment | ||
| Codes from PROTECT-CHILD Data Model Variables | Codes from OHDSI Standardized Vocabularies | ||||
| clinical_variable.weight | clinical_variable.weight | is equivalent to | 3025315 | Body weight | OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC. |
| is related to | 9529 | kilogram | OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM. | ||
| clinical_variable.height | clinical_variable.height | is equivalent to | 3036277 | Body height | OMOP MEASUREMENT.measurement_concept_id; vocabulary LOINC. |
| is related to | 8582 | centimeter | OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM. | ||
| clinical_variable.concomitant_disease | clinical_variable.concomitant_disease | narrower | 200219 | Abdominal pain | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. |
| narrower | 45757063 | Allergic Bronchopulmonary Mycosis | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 200528 | Ascites | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 195856 | Cholangitis | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 434621 | Autoimmune disease | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 192963 | Disorder of pancreas | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 201820 | Diabetes mellitus | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 196523 | Diarrhea | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 433595 | Edema | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4096682 | Bleeding from nose | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 437663 | Fever | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 40480518 | Hyperplasia of gingiva | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4150016 | Malabsorption of glucose | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4311629 | Impaired glucose tolerance | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 378253 | Headache | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4204047 | Neurological symptom | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4223098 | Hepatic artery thrombosis | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4029488 | Hepatic encephalopathy | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4245975 | Hepatic failure | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 197676 | Large liver | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4159144 | Hepatopulmonary syndrome | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 196455 | Hepatorenal syndrome | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 134718 | Hirsutism | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 376965 | Hypertensive retinopathy | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 316866 | Hypertensive disorder | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4120314 | Hypertriglyceridemia | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 45766189 | Hypoxic ischemic encephalopathy | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4302654 | Itching | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 137977 | Jaundice | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 37167217 | De novo thrombotic microangiopathy following transplant of kidney | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4184746 | Left ventricular hypertrophy | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 315085 | Lymphadenopathy | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 75004 | Frank hematuria | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 31967 | Nausea | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4306451 | Oliguria | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4094986 | Ulcer of mouth | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4290672 | Acholic stool | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 140214 | Eruption | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 377091 | Seizure | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4083797 | Telangiectasia disorder | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 200527 | Splenomegaly | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 138455 | Stomatitis | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4261202 | Uremia | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 4318546 | Stenosis of ureter | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 374034 | Visual disturbance | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 441408 | Vomiting | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED. | ||
| narrower | 2000000033 | Histological evidence of MMF-related enteropathy | OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary PROTECT-CHILD. | ||
| narrower | 376961 | Disturbance of consciousness | OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED. | ||
| narrower | 4223659 | Fatigue | OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED. | ||
| narrower | 4272240 | Malaise | OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED. | ||
| narrower | 4134010 | Weight decreased | OMOP OBSERVATION.observation_concept_id; vocabulary SNOMED. | ||
| narrower | 2000000028 | Histological evidence of monoclonal proliferation | OMOP OBSERVATION.observation_concept_id; vocabulary PROTECT-CHILD. | ||
| narrower | 2000000037 | Histological evidence on biospy | OMOP OBSERVATION.observation_concept_id; vocabulary PROTECT-CHILD. | ||
| narrower | 46273152 | Endoscopic retrograde cholangiopancreatography | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| narrower | 4201632 | Percutaneous transhepatic insertion of biliary drain | OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED. | ||
| is equivalent to | 4065263 | Ambulatory blood pressure recording | OMOP MEASUREMENT.measurement_concept_id; vocabulary SNOMED. | ||
| clinical_variable.diuresis_value | clinical_variable.diuresis_value | is equivalent to | 4247279 | Diuresis | OMOP MEASUREMENT.measurement_concept_id; vocabulary SNOMED. |
| is related to | 8752 | millimeter per hour | OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM. | ||