NHS North West Genomics
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NHS North West Genomics, published by NHS North West Genomics. This guide is not an authorized publication; it is the continuous build for version 0.2.1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/nw-gmsa/nw-gmsa.github.com/ and changes regularly. See the Directory of published versions

ConceptMap: Sample Type (SNOMED) to iGene Specimen Type

Official URL: https://fhir.nwgenomics.nhs.uk/ConceptMap/SampleSCTtoIGENE Version: 0.2.1
Draft as of 2026-02-27 Computable Name:

Sample Type (SNOMED) to iGene Specimen Type

Mapping from Specimen Type to (not specified)


Group 1 Mapping from http://snomed.info/sct|http://snomed.info/sct/83821000000107 to iGene Codes

Source Concept DetailsRelationshipTarget Concept Details
Codes from http://snomed.info/sct|http://snomed.info/sct/83821000000107Codes from iGene Codes
119297000Blood specimenis equivalent toSAMPLE: BL
122556008Cord blood specimenis equivalent toSAMPLE: BL
122575003Urine specimenis equivalent toSAMPLE: Urine
441479001Fresh tissue specimenis equivalent toSAMPLE: TC
16214131000119100is equivalent toSAMPLE: TC
119342007Saliva specimenis equivalent toSAMPLE: SALIVA
309147000Thyroid cyst fluid sampleis equivalent toSAMPLE: Cystic fluid
258450006Cerebrospinal fluid sampleis equivalent toSAMPLE: CSF
119373006Amniotic fluid specimenis equivalent toSAMPLE: AF
309201001Ascitic fluid sampleis equivalent toSAMPLE: Ascitic fluid
258580003Whole blood sampleis equivalent toSAMPLE: BL
737357006Foetal blood specimenis equivalent toSAMPLE: BL
122555007Venous blood specimenis equivalent toSAMPLE: BL
440500007Blood spot specimen (specimen)is equivalent toSAMPLE: BSP
119359002Bone marrow specimenis equivalent toSAMPLE: BM
733104004Buccal swabis equivalent toSAMPLE: BS
258565009Chorionic villi sampleis equivalent toSAMPLE: CVB
702451000Cultured cells (substance)is equivalent toSAMPLE: Cult Cells
441652008Formalin-fixed paraffin-embedded tissue specimenis related toSAMPLE: FFPE-SL
is related toSAMPLE: FFPE-SH
is related toSAMPLE: FFPE-PCS
3040001000004100is equivalent toSAMPLE: FFPE-WB
122571007Pericardial fluid specimenis equivalent toSAMPLE: PERICARDIAL FLUID
418564007Pleural fluid specimen (specimen)is equivalent toSAMPLE: PLF