PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build
PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions
| Draft as of 2026-09-28 |
{
"resourceType" : "ConceptMap",
"id" : "dm-lab-result-to-omop",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ConceptMap dm-lab-result-to-omop</b></p><a name=\"dm-lab-result-to-omop\"> </a><a name=\"hcdm-lab-result-to-omop\"> </a><p>This mapping does not specify any particular context of use.</p><br/><p>Mapping from <a href=\"CodeSystem-dm-variable-cs.html\">PROTECT-CHILD Data Model Variables</a> to <a href=\"http://terminology.hl7.org/6.3.0/CodeSystem-OMOP.html\">OHDSI Standardized Vocabularies</a></p><table class=\"grid\"><tr><td colspan=\"2\"><b>Source Concept Details</b></td><td><b>Relationship</b></td><td colspan=\"2\"><b>Target Concept Details</b></td><td><b>Comment</b></td></tr><tr><td colspan=\"2\"><b>Codes</b> from <a href=\"CodeSystem-dm-variable-cs.html\" title=\"https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/dm-variable-cs\">PROTECT-CHILD Data Model Variables</a></td><td/><td colspan=\"2\"><b>Codes</b> from <a href=\"http://terminology.hl7.org/6.3.0/CodeSystem-OMOP.html\" title=\"https://fhir-terminology.ohdsi.org\">OHDSI Standardized Vocabularies</a></td><td/></tr><tr><td style=\"border-right-width: 0px; border-bottom-style: none\">lab_result.unit</td><td style=\"border-left-width: 0px; border-bottom-style: none\">lab_result.unit</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8840</td><td style=\"border-left-width: 0px\">milligram per deciliter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8749</td><td style=\"border-left-width: 0px\">micromole per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">720870</td><td style=\"border-left-width: 0px\">milliliter per minute per 1.73 square meter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8751</td><td style=\"border-left-width: 0px\">milligram per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">9490</td><td style=\"border-left-width: 0px\">equivalent per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8753</td><td style=\"border-left-width: 0px\">millimole per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8725</td><td style=\"border-left-width: 0px\">nanogram per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8736</td><td style=\"border-left-width: 0px\">nanomole per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8645</td><td style=\"border-left-width: 0px\">unit per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8554</td><td style=\"border-left-width: 0px\">percent</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8636</td><td style=\"border-left-width: 0px\">gram per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8523</td><td style=\"border-left-width: 0px\">ratio</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8713</td><td style=\"border-left-width: 0px\">gram per deciliter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8734</td><td style=\"border-left-width: 0px\">trillion per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">9442</td><td style=\"border-left-width: 0px\">million per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8810</td><td style=\"border-left-width: 0px\">kilounit per liter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8555</td><td style=\"border-left-width: 0px\">second</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8784</td><td style=\"border-left-width: 0px\">cells per microliter</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8909</td><td style=\"border-left-width: 0px\">milligram per 24 hours</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">9565</td><td style=\"border-left-width: 0px\">milligram per milligram</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none; border-bottom-style: none\"/><td style=\"border-left-width: 0px; border-top-style: none; border-bottom-style: none\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">44777612</td><td style=\"border-left-width: 0px\">milligram per millimole</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr><tr><td style=\"border-right-width: 0px; border-top-style: none\"/><td style=\"border-top-style: none; border-left-width: 0px\"/><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td style=\"border-right-width: 0px\">8723</td><td style=\"border-left-width: 0px\">milligram per gram</td><td>OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM.</td></tr></table></div>"
},
"url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-lab-result-to-omop",
"version" : "0.1.0-ci-build",
"name" : "DmLabResultToOmop",
"title" : "DM lab_result → OMOP",
"status" : "draft",
"experimental" : false,
"date" : "2026-09-28T06:51:47+00:00",
"publisher" : "Protect Child",
"contact" : [
{
"name" : "Protect Child",
"telecom" : [
{
"system" : "url",
"value" : "https://protect-child.eu/"
}
]
}
],
"description" : "The OMOP concepts for each column of the DMv1.2 lab_result table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. `equivalent`: the column's own concept; `narrower`: one of several concepts the column's values map to; `relatedto`: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary).",
"group" : [
{
"source" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/dm-variable-cs",
"target" : "https://fhir-terminology.ohdsi.org",
"element" : [
{
"code" : "lab_result.unit",
"target" : [
{
"code" : "8840",
"display" : "milligram per deciliter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8749",
"display" : "micromole per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "720870",
"display" : "milliliter per minute per 1.73 square meter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8751",
"display" : "milligram per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "9490",
"display" : "equivalent per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8753",
"display" : "millimole per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8725",
"display" : "nanogram per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8736",
"display" : "nanomole per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8645",
"display" : "unit per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8554",
"display" : "percent",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8636",
"display" : "gram per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8523",
"display" : "ratio",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8713",
"display" : "gram per deciliter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8734",
"display" : "trillion per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "9442",
"display" : "million per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8810",
"display" : "kilounit per liter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8555",
"display" : "second",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8784",
"display" : "cells per microliter",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8909",
"display" : "milligram per 24 hours",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "9565",
"display" : "milligram per milligram",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "44777612",
"display" : "milligram per millimole",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
},
{
"code" : "8723",
"display" : "milligram per gram",
"equivalence" : "relatedto",
"comment" : "OMOP MEASUREMENT.unit_concept_id; vocabulary UCUM."
}
]
}
]
}
]
}