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PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -

PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build

PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

CodeSystem: PROTECT-CHILD OMOP custom concepts

Official URL: https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/protect-child-omop-vocabulary Version: 0.1.0-ci-build
Draft as of 2026-09-28 Computable Name: ProtectChildOmopVocabulary

The study's own OMOP concepts (vocabulary_id PROTECT-CHILD, concept_id 2000000000 and above), for data-model values that have no standard concept in Athena. Codes are the OMOP concept_id; the ConceptMaps cite them under the OMOP system as they would appear in a PROTECT-CHILD OMOP instance.

This Code system is referenced in the content logical definition of the following value sets:

  • This CodeSystem is not used here; it may be used elsewhere (e.g. specifications and/or implementations that use this content)

Properties

This code system defines the following properties for its concepts

NameCodeTypeDescription
domain domain string OMOP domain_id
class class string OMOP concept_class_id

Concepts

This case-sensitive code system https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/protect-child-omop-vocabulary defines the following codes:

CodeDisplayDefinitiondomainclass
2000000007 has organ donor PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): has organ donor. Relationship Relationship
2000000008 is organ donor for PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): is organ donor for. Relationship Relationship
2000000009 Graft-to-recipient weight ratio PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Graft-to-recipient weight ratio. Measurement Observable Entity
2000000010 Donor–recipient vessel mismatch PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Donor–recipient vessel mismatch. Observation Clinical Observation
2000000016 Type of donor PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Type of donor. Observation Clinical Observation
2000000017 Duct-to-Duct Anastomosis PROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Duct-to-Duct Anastomosis. Procedure Procedure
2000000018 Hepaticocholedochostomy PROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Hepaticocholedochostomy. Procedure Procedure
2000000019 Bilioenteric Anastomosis PROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Bilioenteric Anastomosis. Procedure Procedure
2000000031 Liver ischemia PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Liver ischemia. Condition Disorder
2000000028 Histological evidence of monoclonal proliferation PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Histological evidence of monoclonal proliferation. Observation Clinical Observation
2000000033 Histological evidence of MMF-related enteropathy PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Histological evidence of MMF-related enteropathy. Condition Clinical Finding
2000000037 Histological evidence on biospy PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Histological evidence on biospy. Observation Clinical Observation
2000000038 Systolic blood pressure load PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Systolic blood pressure load. Measurement Observable Entity
2000000039 Diastolic blood pressure load PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Diastolic blood pressure load. Measurement Observable Entity
2000000040 Systolic blood pressure Dip PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Systolic blood pressure Dip. Measurement Observable Entity
2000000041 Diastolic blood pressure load PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Diastolic blood pressure load. Measurement Observable Entity
2000000023 Liver early allograft dysfunction PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Liver early allograft dysfunction. Condition Clinical Finding
2000000014 Mycophenolate poisoning PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Mycophenolate poisoning. Condition Disorder
2000000015 mTOR inhibitors poisoning PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): mTOR inhibitors poisoning. Condition Disorder
2000000024 Relapse of primary immunomediated disease PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Relapse of primary immunomediated disease. Condition Clinical Finding
2000000029 Alloimmunization PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Alloimmunization. Condition Clinical Finding
2000000042 Primary diagnosis confirmed by histology PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Primary diagnosis confirmed by histology. Observation Clinical Finding
2000000002 Pre-transplant visit PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Pre-transplant visit. Observation Clinical Finding
2000000003 Clinical event visit PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Clinical event visit. Observation Clinical Finding
2000000004 Termination visit PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Termination visit. Observation Clinical Finding
2000000043 Ongoing medication PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Ongoing medication. Observation Clinical Finding
2000000013 Measurement of trough drug concentration PROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Measurement of trough drug concentration. Measurement Procedure
2000000022 Measured AUC for [drug] PROTECT-CHILD custom OMOP concept (Measurement domain, Lab Test): Measured AUC for [drug]. Measurement Lab Test
2000000044 Banff Classification of Allograft Pathology: Category 1 PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 1. Measurement Staging / Scales
2000000045 Banff Classification of Allograft Pathology: Category 2 PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 2. Measurement Staging / Scales
2000000046 Banff Classification of Allograft Pathology: Category 3 PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 3. Measurement Staging / Scales
2000000047 Banff Classification of Allograft Pathology: Category 4 PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 4. Measurement Staging / Scales
2000000048 Banff Classification of Allograft Pathology: Category 5 PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 5. Measurement Staging / Scales
2000000032 Delayed graft function PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Delayed graft function. Condition Disorder
2000000026 Hypoxic ischemic event PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Hypoxic ischemic event. Condition Disorder
2000000035 Histological evidence of CNI toxicity PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Histological evidence of CNI toxicity. Condition Clinical Finding
2000000049 Anti-gp210 antibody level PROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Anti-gp210 antibody level. Measurement Procedure
2000000050 Anti-sp100 antibody level PROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Anti-sp100 antibody level. Measurement Procedure
2000000051 MFI category: Weak Reaction (500-2k) PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Weak Reaction (500-2k). Measurement Staging / Scales
2000000052 MFI category: Moderate Reaction (2k-4k) PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Moderate Reaction (2k-4k). Measurement Staging / Scales
2000000053 MFI category: Strong Reaction (>4k) PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Strong Reaction (>4k). Measurement Staging / Scales
2000000054 has finding PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): has finding. Relationship Relationship
2000000055 is finding of PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): is finding of. Relationship Relationship