Genomics Reporting Implementation Guide
3.0.0 - STU3
Genomics Reporting Implementation Guide
3.0.0 - STU3
Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions
Generated Narrative: Bundle bundle-complexVariant-nonHGVS
Bundle bundle-complexVariant-nonHGVS of type transaction
Entry 1 - fullUrl = urn:uuid:16fdd5fc-e665-48af-99e4-48d603f3e12d
Resource Observation:
Generated Narrative: Observation Inline-Instance-for-complexVariant-nonHGVS-1
status: Final
category: Laboratory, Genetics
code: Genetic variant assessment
subject: Bundle: type = transaction
effective: 2019-03-05
issued: 2019-03-05 16:04:44+0000
performer: Bundle: type = transaction
value: Present
component
code: Transcript ref sequence ID
value: NM_022787.3
component
code: Genomic allele start-end
value: 769-769
component
code: Genomic ref allele [ID]
value: G
component
code: Genomic alt allele [ID]
value: A
component
code: Allelic state
value: Heterozygous
Request:
POST Observation
Entry 2 - fullUrl = urn:uuid:16fdd5fc-e665-48af-99e4-48d603f3e12e
Resource Observation:
Generated Narrative: Observation Inline-Instance-for-complexVariant-nonHGVS-2
status: Final
category: Laboratory, Genetics
code: Genetic variant assessment
subject: Bundle: type = transaction
effective: 2019-03-05
issued: 2019-03-05 16:04:44+0000
performer: Bundle: type = transaction
value: Present
component
code: Transcript ref sequence ID
value: NM_022787.3
component
code: Genomic allele start-end
value: 53-53
component
code: Genomic ref allele [ID]
value: A
component
code: Genomic alt allele [ID]
value: G
component
code: Allelic state
value: Heterozygous
Request:
POST Observation
Entry 3 - fullUrl = urn:uuid:16fdd5fc-e665-48af-99e4-48d603f3e12a
Resource Observation:
Generated Narrative: Observation Inline-Instance-for-complexVariant-nonHGVS-3
status: Final
category: Laboratory, Genetics
code: Genotype display name
subject: Bundle: type = transaction
effective: 2019-03-05
issued: 2019-03-05 16:04:44+0000
performer: Bundle: type = transaction
value: NM_022787.3(NMNAT1):c.[53A>G];[769G>A] AND Cone-rod dystrophy
hasMember:
Request:
POST Observation
Entry 4 - fullUrl = urn:uuid:19ac0aeb-6bd4-4e92-a891-d44a807bfeab
Resource Organization:
Generated Narrative: Organization performingLab
name: aTypingLab Inc
alias: aTL
Contacts
Telecom Address ph: 1-800-555-1234(Work) 123 Main St, Sometown, ND 99999(work)
Request:
POST Organization
Entry 5 - fullUrl = urn:uuid:19ac0aeb-6bd4-4e92-a891-d44a807bfeac
Resource Patient:
Generated Narrative: Patient patient
John Storm(official) Male, DoB: 1986-12-31
Request:
POST Patient
IG © 2022+ HL7 International / Clinical Genomics. Package hl7.fhir.uv.genomics-reporting#3.0.0 based on FHIR 4.0.1. Generated 2024-12-12
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