Genomics Reporting Implementation Guide
3.0.0 - release International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

Example DiagnosticReport: somaticReport

Generated Narrative: DiagnosticReport somaticReport

Genetic analysis report (Genetics)

When For2023-02-02
Performers Practitioner Test Dolin Organization My Test Pathology Laboratories
Identifier Accession ID/23-0000345

Report Details

CodeValueFlagsNoteWhen ForReported
Genetic variant assessmentPresentFinal2023-02-01
Genetic variant assessmentPresentFinal2023-02-01
Genetic variant assessmentPresentFinal2023-02-01
Genetic variant assessmentPresentFinal2023-02-01
Genetic variant assessmentPresentFinal2023-02-01
Genetic variant assessmentPresentFinal2023-02-01
Genetic variant assessmentPresentFinal2023-02-01
Genetic variant assessmentPresentFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Diagnostic ImplicationFinal2023-02-01
Therapeutic ImplicationFinal2023-02-01
Therapeutic ImplicationFinal2023-02-01
Therapeutic ImplicationFinal2023-02-01
Therapeutic ImplicationFinal2023-02-01
Therapeutic ImplicationFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Molecular ConsequenceFinal2023-02-01
Mutations/Megabase [# Ratio] in Tumor29.8Final2023-02-01
Microsatellite instability [Interpretation] in Cancer specimen QualitativeMSI-HFinal2023-02-01
PD-L1 by clone 22C3 in Tissue by Immune stain ReportPositiveFinal5% tumor proportion score2023-02-01
Haplotype NameHLA-A*24:02Final2023-02-012023-02-01 00:00:00-0500
Haplotype NameHLA-A*02:06Final2023-02-012023-02-01 00:00:00-0500
Haplotype NameHLA-B*35:01Final2023-02-012023-02-01 00:00:00-0500
Haplotype NameHLA-B*35:01Final2023-02-012023-02-01 00:00:00-0500
Haplotype NameHLA-C*03:03Final2023-02-012023-02-01 00:00:00-0500
Haplotype NameHLA-C*15:02Final2023-02-012023-02-01 00:00:00-0500

Patient is positive for Tier 1 / Level A variants, including variants with FDA-approved indications.

Coded Conclusions:

  • Positive