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PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -

PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build

PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

Logical Model: GenomicTest logical model

Official URL: https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-genomic-test-lm Version: 0.1.0-ci-build
Draft as of 2026-02-09 Computable Name: PcGenomicTest

Logical model representing the PROTECT-CHILD data model entity genomic_test.

Usages:

  • This Logical Model is not used by any profiles in this Implementation Guide

You can also check for usages in the FHIR IG Statistics

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-genomic-test-lm 0..* Base GenomicTest logical model
... genomicTestId 1..1 string Genomic test id
... referenceGenomeId 0..1 string Reference genome id
... testName 0..1 string Test name
... sequencingDevice 0..1 string Sequencing device
... targetCapture 0..1 string Target capture
... readType 0..1 CodeableConcept Read type
... readLength 0..1 integer Read length
... meanTargetCoverage 0..1 decimal Mean target coverage
... perTargetBaseCover100x 0..1 decimal Per target base cover 100x
... alignmentTools 0..1 string Alignment tools
... variantCallingTools 0..1 string Variant calling tools
... chromosomeCorrdinate 0..1 string Chromosome corrdinate
... annotationTools 0..1 string Annotation tools
... annotationDatabases 0..1 string Annotation databases

doco Documentation for this format

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-genomic-test-lm 0..* Base GenomicTest logical model
... genomicTestId 1..1 string Genomic test id
... referenceGenomeId 0..1 string Reference genome id
... testName 0..1 string Test name
... sequencingDevice 0..1 string Sequencing device
... targetCapture 0..1 string Target capture
... readType 0..1 CodeableConcept Read type
... readLength 0..1 integer Read length
... meanTargetCoverage 0..1 decimal Mean target coverage
... perTargetBaseCover100x 0..1 decimal Per target base cover 100x
... alignmentTools 0..1 string Alignment tools
... variantCallingTools 0..1 string Variant calling tools
... chromosomeCorrdinate 0..1 string Chromosome corrdinate
... annotationTools 0..1 string Annotation tools
... annotationDatabases 0..1 string Annotation databases

doco Documentation for this format
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-genomic-test-lm 0..* Base GenomicTest logical model
... genomicTestId 1..1 string Genomic test id
... referenceGenomeId 0..1 string Reference genome id
... testName 0..1 string Test name
... sequencingDevice 0..1 string Sequencing device
... targetCapture 0..1 string Target capture
... readType 0..1 CodeableConcept Read type
... readLength 0..1 integer Read length
... meanTargetCoverage 0..1 decimal Mean target coverage
... perTargetBaseCover100x 0..1 decimal Per target base cover 100x
... alignmentTools 0..1 string Alignment tools
... variantCallingTools 0..1 string Variant calling tools
... chromosomeCorrdinate 0..1 string Chromosome corrdinate
... annotationTools 0..1 string Annotation tools
... annotationDatabases 0..1 string Annotation databases

doco Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(1 nested mandatory element)

Key Elements View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-genomic-test-lm 0..* Base GenomicTest logical model
... genomicTestId 1..1 string Genomic test id
... referenceGenomeId 0..1 string Reference genome id
... testName 0..1 string Test name
... sequencingDevice 0..1 string Sequencing device
... targetCapture 0..1 string Target capture
... readType 0..1 CodeableConcept Read type
... readLength 0..1 integer Read length
... meanTargetCoverage 0..1 decimal Mean target coverage
... perTargetBaseCover100x 0..1 decimal Per target base cover 100x
... alignmentTools 0..1 string Alignment tools
... variantCallingTools 0..1 string Variant calling tools
... chromosomeCorrdinate 0..1 string Chromosome corrdinate
... annotationTools 0..1 string Annotation tools
... annotationDatabases 0..1 string Annotation databases

doco Documentation for this format

Differential View

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-genomic-test-lm 0..* Base GenomicTest logical model
... genomicTestId 1..1 string Genomic test id
... referenceGenomeId 0..1 string Reference genome id
... testName 0..1 string Test name
... sequencingDevice 0..1 string Sequencing device
... targetCapture 0..1 string Target capture
... readType 0..1 CodeableConcept Read type
... readLength 0..1 integer Read length
... meanTargetCoverage 0..1 decimal Mean target coverage
... perTargetBaseCover100x 0..1 decimal Per target base cover 100x
... alignmentTools 0..1 string Alignment tools
... variantCallingTools 0..1 string Variant calling tools
... chromosomeCorrdinate 0..1 string Chromosome corrdinate
... annotationTools 0..1 string Annotation tools
... annotationDatabases 0..1 string Annotation databases

doco Documentation for this format

Snapshot View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-genomic-test-lm 0..* Base GenomicTest logical model
... genomicTestId 1..1 string Genomic test id
... referenceGenomeId 0..1 string Reference genome id
... testName 0..1 string Test name
... sequencingDevice 0..1 string Sequencing device
... targetCapture 0..1 string Target capture
... readType 0..1 CodeableConcept Read type
... readLength 0..1 integer Read length
... meanTargetCoverage 0..1 decimal Mean target coverage
... perTargetBaseCover100x 0..1 decimal Per target base cover 100x
... alignmentTools 0..1 string Alignment tools
... variantCallingTools 0..1 string Variant calling tools
... chromosomeCorrdinate 0..1 string Chromosome corrdinate
... annotationTools 0..1 string Annotation tools
... annotationDatabases 0..1 string Annotation databases

doco Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(1 nested mandatory element)

 

Other representations of profile: CSV, Excel