PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: Example Methylomic Study - XML Representation

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<Basic xmlns="http://hl7.org/fhir">
  <id value="methylomic-study-example-1"/>
  <meta>
    <profile
             value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study"/>
  </meta>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: Basic methylomic-study-example-1</b></p><a name="methylomic-study-example-1"> </a><a name="hcmethylomic-study-example-1"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px"/><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-methylomic-study.html">Methylomic Study</a></p></div><p><b>Reference genome ID relationship</b>: <a href="Basic-reference-genome-grch38.html">Basic GRCh38</a></p><p><b>Target region ID</b>: TR0001</p><p><b>Beta value</b>: 0.72</p><p><b>M value</b>: 1.85</p><p><b>Detection p-value</b>: 0.0003</p><p><b>Read count</b>: 250</p><p><b>Methylated reads</b>: 180</p><p><b>identifier</b>: <code>https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/methylomic-study-id</code>/MS0001</p><p><b>code</b>: <span title="Codes:{https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/methylomic-study-type locus}">Locus-level methylomic record</span></p></div>
  </text>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-reference-genome-ref">
    <valueReference>🔗 
      <reference value="Basic/reference-genome-grch38"/>
    </valueReference>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-target-region-id">
    <valueString value="TR0001"/>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-beta-value">
    <valueDecimal value="0.72"/>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-m-value">
    <valueDecimal value="1.85"/>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-detection-p-value">
    <valueDecimal value="0.0003"/>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-read-count">
    <valueInteger value="250"/>
  </extension>
  <extension
             url="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-methylated-reads">
    <valueInteger value="180"/>
  </extension>
  <identifier>
    <system
            value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/methylomic-study-id"/>
    <value value="MS0001"/>
  </identifier>
  <code>
    <coding>
      <system
              value="https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/methylomic-study-type"/>
      <code value="locus"/>
      <display value="Locus-level methylomic record"/>
    </coding>
  </code>
</Basic>