PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions
: Example Methylomic Study - TTL Representation
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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
a fhir:Basic ;
fhir:nodeRole fhir:treeRoot ;
fhir:id [ fhir:v "methylomic-study-example-1"] ; #
fhir:meta [
( fhir:profile [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "extensions" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Basic methylomic-study-example-1</b></p><a name=\"methylomic-study-example-1\"> </a><a name=\"hcmethylomic-study-example-1\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-methylomic-study.html\">Methylomic Study</a></p></div><p><b>Reference genome ID relationship</b>: <a href=\"Basic-reference-genome-grch38.html\">Basic GRCh38</a></p><p><b>Target region ID</b>: TR0001</p><p><b>Beta value</b>: 0.72</p><p><b>M value</b>: 1.85</p><p><b>Detection p-value</b>: 0.0003</p><p><b>Read count</b>: 250</p><p><b>Methylated reads</b>: 180</p><p><b>identifier</b>: <code>https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/methylomic-study-id</code>/MS0001</p><p><b>code</b>: <span title=\"Codes:{https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/methylomic-study-type locus}\">Locus-level methylomic record</span></p></div>"^^rdf:XMLLiteral ]
] ; #
fhir:extension ( [
fhir:url [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-reference-genome-ref"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-reference-genome-ref> ] ;
fhir:value [
a fhir:Reference ;
fhir:l fhir:Basic/reference-genome-grch38 ;
fhir:reference [ fhir:v "Basic/reference-genome-grch38" ] ]
] [
fhir:url [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-target-region-id"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-target-region-id> ] ;
fhir:value [
a fhir:String ;
fhir:v "TR0001" ]
] [
fhir:url [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-beta-value"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-beta-value> ] ;
fhir:value [
a fhir:Decimal ;
fhir:v 0.72 ]
] [
fhir:url [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-m-value"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-m-value> ] ;
fhir:value [
a fhir:Decimal ;
fhir:v 1.85 ]
] [
fhir:url [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-detection-p-value"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-detection-p-value> ] ;
fhir:value [
a fhir:Decimal ;
fhir:v 0.0003 ]
] [
fhir:url [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-read-count"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-read-count> ] ;
fhir:value [
a fhir:Integer ;
fhir:v 250 ]
] [
fhir:url [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-methylated-reads"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-methylated-reads> ] ;
fhir:value [
a fhir:Integer ;
fhir:v 180 ]
] ) ; #
fhir:identifier ( [
fhir:system [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/methylomic-study-id"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/methylomic-study-id> ] ;
fhir:value [ fhir:v "MS0001" ]
] ) ; #
fhir:code [
( fhir:coding [
fhir:system [
fhir:v "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/methylomic-study-type"^^xsd:anyURI ;
fhir:l <https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/methylomic-study-type> ] ;
fhir:code [ fhir:v "locus" ] ;
fhir:display [ fhir:v "Locus-level methylomic record" ] ] )
] . #
