PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: Example Methylomic Study - JSON Representation

Raw json | Download

{
  "resourceType" : "Basic",
  "id" : "methylomic-study-example-1",
  "meta" : {
    "profile" : [
      🔗 "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study"
    ]
  },
  "text" : {
    "status" : "extensions",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Basic methylomic-study-example-1</b></p><a name=\"methylomic-study-example-1\"> </a><a name=\"hcmethylomic-study-example-1\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-methylomic-study.html\">Methylomic Study</a></p></div><p><b>Reference genome ID relationship</b>: <a href=\"Basic-reference-genome-grch38.html\">Basic GRCh38</a></p><p><b>Target region ID</b>: TR0001</p><p><b>Beta value</b>: 0.72</p><p><b>M value</b>: 1.85</p><p><b>Detection p-value</b>: 0.0003</p><p><b>Read count</b>: 250</p><p><b>Methylated reads</b>: 180</p><p><b>identifier</b>: <code>https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/methylomic-study-id</code>/MS0001</p><p><b>code</b>: <span title=\"Codes:{https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/methylomic-study-type locus}\">Locus-level methylomic record</span></p></div>"
  },
  "extension" : [
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-reference-genome-ref",
      "valueReference" : {
        🔗 "reference" : "Basic/reference-genome-grch38"
      }
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-target-region-id",
      "valueString" : "TR0001"
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-beta-value",
      "valueDecimal" : 0.72
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-m-value",
      "valueDecimal" : 1.85
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-detection-p-value",
      "valueDecimal" : 0.0003
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-read-count",
      "valueInteger" : 250
    },
    {
      "url" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/methylomic-study-methylated-reads",
      "valueInteger" : 180
    }
  ],
  "identifier" : [
    {
      "system" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/NamingSystem/methylomic-study-id",
      "value" : "MS0001"
    }
  ],
  "code" : {
    "coding" : [
      {
        "system" : "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/methylomic-study-type",
        "code" : "locus",
        "display" : "Locus-level methylomic record"
      }
    ]
  }
}