Genomics Reporting Implementation Guide
3.0.1-SNAPSHOT - Ballot International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.1-SNAPSHOT built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: Genomic Study Status Map - XML Representation

Draft as of 2024-04-09

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<ConceptMap xmlns="http://hl7.org/fhir">
  <id value="GenomicStudyStatusMap"/>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p>Mapping from <a href="http://hl7.org/fhir/R4/valueset-event-status.html">EventStatus</a> to <a href="ValueSet-genomic-study-status-vs.html">Genomic Study Status ValueSet</a></p><p>DRAFT. Published on 2024-04-09 13:57:55+0000 by HL7 International / Clinical Genomics (HL7 International / Clinical Genomics: <a href="http://www.hl7.org/Special/committees/clingenomics">http://www.hl7.org/Special/com...</a>, <a href="mailto:cg@lists.HL7.org">cg@lists.HL7.org</a>). </p><div><p>Mapping from Procedure's EventStatus (http://hl7.org/fhir/ValueSet/event-status) ValueSet for 'status' to http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomicstudy-status-vs codes</p>
</div><br/><p><b>Group 1</b> Mapping from <a href="http://hl7.org/fhir/R4/codesystem-event-status.html">EventStatus</a> to <a href="CodeSystem-genomic-study-status-cs.html">Genomic Study Status CodeSystem</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>completed</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>available</td></tr><tr><td>preparation</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>registered</td></tr><tr><td>in-progress</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>registered</td></tr><tr><td>on-hold</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>registered</td></tr><tr><td>not-done</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>cancelled</td></tr><tr><td>stopped</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#wider" title="wider">maps to wider concept</a></td><td>cancelled</td></tr><tr><td>entered-in-error</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equal" title="equal">is equal to</a></td><td>entered-in-error</td></tr><tr><td>unknown</td><td><a href="http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>unknown</td></tr></table></div>
  </text>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg">
    <valueCode value="cg"/>
  </extension>
  <url
       value="http://hl7.org/fhir/uv/genomics-reporting/ConceptMap/GenomicStudyStatusMap"/>
  <version value="3.0.1-SNAPSHOT"/>
  <name value="GenomicStudyStatusMap"/>
  <title value="Genomic Study Status Map"/>
  <status value="draft"/>
  <experimental value="false"/>
  <date value="2024-04-09T13:57:55+00:00"/>
  <publisher value="HL7 International / Clinical Genomics"/>
  <contact>
    <name value="HL7 International / Clinical Genomics"/>
    <telecom>
      <system value="url"/>
      <value value="http://www.hl7.org/Special/committees/clingenomics"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="cg@lists.HL7.org"/>
    </telecom>
  </contact>
  <description
               value="Mapping from Procedure's EventStatus (http://hl7.org/fhir/ValueSet/event-status) ValueSet for 'status' to http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomicstudy-status-vs codes"/>
  <jurisdiction>
    <coding>
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
      <code value="001"/>
      <display value="World"/>
    </coding>
  </jurisdiction>
  <sourceCanonical value="http://hl7.org/fhir/ValueSet/event-status"/>
  <targetCanonical
                   value="http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomic-study-status-vs"/>
  <group>
    <source value="http://hl7.org/fhir/event-status"/>
    <target
            value="http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-status-cs"/>
    <element>
      <code value="completed"/>
      <display value="Completed"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="equivalent"/>
        </modifierExtension>
        <code value="available"/>
        <display value="Available"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
    <element>
      <code value="preparation"/>
      <display value="Preparation"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="wider"/>
        </modifierExtension>
        <code value="registered"/>
        <display value="Registered"/>
        <equivalence value="wider"/>
      </target>
    </element>
    <element>
      <code value="in-progress"/>
      <display value="In Progress"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="wider"/>
        </modifierExtension>
        <code value="registered"/>
        <display value="Registered"/>
        <equivalence value="wider"/>
      </target>
    </element>
    <element>
      <code value="on-hold"/>
      <display value="On Hold"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="wider"/>
        </modifierExtension>
        <code value="registered"/>
        <display value="Registered"/>
        <equivalence value="wider"/>
      </target>
    </element>
    <element>
      <code value="not-done"/>
      <display value="Not Done"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="wider"/>
        </modifierExtension>
        <code value="cancelled"/>
        <display value="Cancelled"/>
        <equivalence value="wider"/>
      </target>
    </element>
    <element>
      <code value="stopped"/>
      <display value="Stopped"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="wider"/>
        </modifierExtension>
        <code value="cancelled"/>
        <display value="Cancelled"/>
        <equivalence value="wider"/>
      </target>
    </element>
    <element>
      <code value="entered-in-error"/>
      <display value="Entered in Error"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="equal"/>
        </modifierExtension>
        <code value="entered-in-error"/>
        <display value="Entered in Error"/>
        <equivalence value="equal"/>
      </target>
    </element>
    <element>
      <code value="unknown"/>
      <display value="Unknown"/>
      <target>
        <modifierExtension
                           url="http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence">
          <valueCode value="equivalent"/>
        </modifierExtension>
        <code value="unknown"/>
        <display value="Unknown"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
  </group>
</ConceptMap>