Genomics Reporting Implementation Guide
4.0.0-cibuild - CI Build International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 4.0.0-cibuild built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: Genomic Study Status Map - TTL Representation

Page standards status: Trial-use Maturity Level: 2

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/ConceptMap/GenomicStudyStatusMap> a fhir:ConceptMap ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:Resource.id [ fhir:value "GenomicStudyStatusMap"] ;
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ] ;
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ConceptMap GenomicStudyStatusMap</b></p><a name=\"GenomicStudyStatusMap\"> </a><a name=\"hcGenomicStudyStatusMap\"> </a><p>Mapping from <a href=\"http://hl7.org/fhir/R4/valueset-event-status.html\">EventStatus</a> to <a href=\"ValueSet-genomic-study-status-vs.html\">Genomic Study Status ValueSet</a></p><br/><p>Mapping from <a href=\"http://hl7.org/fhir/R4/codesystem-event-status.html\">EventStatus</a> to <a href=\"CodeSystem-genomic-study-status-cs.html\">Genomic Study Status CodeSystem</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>completed</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-equivalent\" title=\"equivalent\">is equivalent to</a></td><td>available</td></tr><tr><td>preparation</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-wider\" title=\"wider\">maps to wider concept</a></td><td>registered</td></tr><tr><td>in-progress</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-wider\" title=\"wider\">maps to wider concept</a></td><td>registered</td></tr><tr><td>on-hold</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-wider\" title=\"wider\">maps to wider concept</a></td><td>registered</td></tr><tr><td>not-done</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-wider\" title=\"wider\">maps to wider concept</a></td><td>cancelled</td></tr><tr><td>stopped</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-wider\" title=\"wider\">maps to wider concept</a></td><td>cancelled</td></tr><tr><td>entered-in-error</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-equal\" title=\"equal\">is equal to</a></td><td>entered-in-error</td></tr><tr><td>unknown</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#concept-map-equivalence-equivalent\" title=\"equivalent\">is equivalent to</a></td><td>unknown</td></tr></table></div>"
  ] ;
  fhir:DomainResource.extension [
     fhir:index 0 ;
     fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg" ] ;
     fhir:Extension.valueCode [ fhir:value "cg" ]
  ], [
     fhir:index 1 ;
     fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm" ] ;
     fhir:Extension.valueInteger [
       fhir:value "2"^^xsd:integer ;
       fhir:Element.extension [
         fhir:index 0 ;
         fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom" ] ;
         fhir:Extension.valueCanonical [
           fhir:value "http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting" ;
           fhir:link <http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting>
         ]
       ]
     ]
  ], [
     fhir:index 2 ;
     fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status" ] ;
     fhir:Extension.valueCode [
       fhir:value "trial-use" ;
       fhir:Element.extension [
         fhir:index 0 ;
         fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom" ] ;
         fhir:Extension.valueCanonical [
           fhir:value "http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting" ;
           fhir:link <http://hl7.org/fhir/uv/genomics-reporting/ImplementationGuide/genomics-reporting>
         ]
       ]
     ]
  ] ;
  fhir:ConceptMap.url [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/ConceptMap/GenomicStudyStatusMap"] ;
  fhir:ConceptMap.version [ fhir:value "4.0.0-cibuild"] ;
  fhir:ConceptMap.name [ fhir:value "GenomicStudyStatusMap"] ;
  fhir:ConceptMap.title [ fhir:value "Genomic Study Status Map"] ;
  fhir:ConceptMap.status [ fhir:value "active"] ;
  fhir:ConceptMap.experimental [ fhir:value "false"^^xsd:boolean] ;
  fhir:ConceptMap.date [ fhir:value "2026-09-21T13:24:35+00:00"^^xsd:dateTime] ;
  fhir:ConceptMap.publisher [ fhir:value "HL7 International / Clinical Genomics"] ;
  fhir:ConceptMap.contact [
     fhir:index 0 ;
     fhir:ContactDetail.name [ fhir:value "HL7 International / Clinical Genomics" ] ;
     fhir:ContactDetail.telecom [
       fhir:index 0 ;
       fhir:ContactPoint.system [ fhir:value "url" ] ;
       fhir:ContactPoint.value [ fhir:value "http://www.hl7.org/Special/committees/clingenomics" ]
     ], [
       fhir:index 1 ;
       fhir:ContactPoint.system [ fhir:value "email" ] ;
       fhir:ContactPoint.value [ fhir:value "cg@lists.HL7.org" ]
     ]
  ] ;
  fhir:ConceptMap.description [ fhir:value "Mapping from Procedure's EventStatus (http://hl7.org/fhir/ValueSet/event-status) ValueSet for 'status' to http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomicstudy-status-vs codes"] ;
  fhir:ConceptMap.jurisdiction [
     fhir:index 0 ;
     fhir:CodeableConcept.coding [
       fhir:index 0 ;
       fhir:Coding.system [ fhir:value "http://unstats.un.org/unsd/methods/m49/m49.htm" ] ;
       fhir:Coding.code [ fhir:value "001" ] ;
       fhir:Coding.display [ fhir:value "World" ]
     ]
  ] ;
  fhir:ConceptMap.sourceCanonical [
     fhir:value "http://hl7.org/fhir/ValueSet/event-status" ;
     fhir:link <http://hl7.org/fhir/ValueSet/event-status>
  ] ;
  fhir:ConceptMap.targetCanonical [
     fhir:value "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomic-study-status-vs" ;
     fhir:link <http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomic-study-status-vs>
  ] ;
  fhir:ConceptMap.group [
     fhir:index 0 ;
     fhir:ConceptMap.group.source [ fhir:value "http://hl7.org/fhir/event-status" ] ;
     fhir:ConceptMap.group.target [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-status-cs" ] ;
     fhir:ConceptMap.group.element [
       fhir:index 0 ;
       fhir:ConceptMap.group.element.code [ fhir:value "completed" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "Completed" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "available" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Available" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "equivalent" ]
       ]
     ], [
       fhir:index 1 ;
       fhir:ConceptMap.group.element.code [ fhir:value "preparation" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "Preparation" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "registered" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Registered" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "wider" ]
       ]
     ], [
       fhir:index 2 ;
       fhir:ConceptMap.group.element.code [ fhir:value "in-progress" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "In Progress" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "registered" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Registered" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "wider" ]
       ]
     ], [
       fhir:index 3 ;
       fhir:ConceptMap.group.element.code [ fhir:value "on-hold" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "On Hold" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "registered" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Registered" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "wider" ]
       ]
     ], [
       fhir:index 4 ;
       fhir:ConceptMap.group.element.code [ fhir:value "not-done" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "Not Done" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "cancelled" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Cancelled" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "wider" ]
       ]
     ], [
       fhir:index 5 ;
       fhir:ConceptMap.group.element.code [ fhir:value "stopped" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "Stopped" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "cancelled" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Cancelled" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "wider" ]
       ]
     ], [
       fhir:index 6 ;
       fhir:ConceptMap.group.element.code [ fhir:value "entered-in-error" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "Entered in Error" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "entered-in-error" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Entered in Error" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "equal" ]
       ]
     ], [
       fhir:index 7 ;
       fhir:ConceptMap.group.element.code [ fhir:value "unknown" ] ;
       fhir:ConceptMap.group.element.display [ fhir:value "Unknown" ] ;
       fhir:ConceptMap.group.element.target [
         fhir:index 0 ;
         fhir:ConceptMap.group.element.target.code [ fhir:value "unknown" ] ;
         fhir:ConceptMap.group.element.target.display [ fhir:value "Unknown" ] ;
         fhir:ConceptMap.group.element.target.equivalence [ fhir:value "equivalent" ]
       ]
     ]
  ] .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/ConceptMap/GenomicStudyStatusMap.ttl> a owl:Ontology ;
  owl:imports fhir:fhir.ttl ;
  owl:versionIRI <http://build.fhir.org/ConceptMap/GenomicStudyStatusMap.ttl> .