NHS North West Genomics
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NHS North West Genomics, published by NHS North West Genomics. This guide is not an authorized publication; it is the continuous build for version 0.2.1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/nw-gmsa/nw-gmsa.github.com/ and changes regularly. See the Directory of published versions

: iGene Codes - TTL Representation

Active as of 2026-02-17

Raw ttl | Download


@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:CodeSystem ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "IGENE"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem IGENE</b></p><a name=\"IGENE\"> </a><a name=\"hcIGENE\"> </a><p>This case-sensitive code system <code>https://fhir.nwgenomics.nhs.uk/CodeSystem/IGENE</code> provides <b>a fragment</b> that includes following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: Urine<a name=\"IGENE-SAMPLE.58Urine\"> </a></td><td>Urine</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: TC<a name=\"IGENE-SAMPLE.58TC\"> </a></td><td>Tissue</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: SALIVA<a name=\"IGENE-SAMPLE.58SALIVA\"> </a></td><td>Saliva</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: PERICARDIAL FLUID<a name=\"IGENE-SAMPLE.58PERICARDIALFLUID\"> </a></td><td>Pericardial fluid</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: No sample received<a name=\"IGENE-SAMPLE.58Nosamplereceived\"> </a></td><td>No Sample Received</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: Lyophilised cell pellet<a name=\"IGENE-SAMPLE.58Lyophilisedcellpellet\"> </a></td><td>Lyophilised cell pellet</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: Liquid Biopsy<a name=\"IGENE-SAMPLE.58LiquidBiopsy\"> </a></td><td>Liquid Biopsy</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: FFPE-WB<a name=\"IGENE-SAMPLE.58FFPE-WB\"> </a></td><td>FFPE - Wax block</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: FFPE-SL<a name=\"IGENE-SAMPLE.58FFPE-SL\"> </a></td><td>FFPE - Slides</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: FFPE-SH<a name=\"IGENE-SAMPLE.58FFPE-SH\"> </a></td><td>FFPE - Shavings</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: FFPE-PCS<a name=\"IGENE-SAMPLE.58FFPE-PCS\"> </a></td><td>FFPE - Positively Charged Slides</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: Cystic fluid<a name=\"IGENE-SAMPLE.58Cysticfluid\"> </a></td><td>Cystic fluid</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: CVB	Chorionic<a name=\"IGENE-SAMPLE.58CVB.9Chorionic\"> </a></td><td>Villus Biopsy</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: Cult Cells<a name=\"IGENE-SAMPLE.58CultCells\"> </a></td><td>Cultured Cells</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: CSF<a name=\"IGENE-SAMPLE.58CSF\"> </a></td><td>Cerebrospinal fluid</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: Cell Pellet<a name=\"IGENE-SAMPLE.58CellPellet\"> </a></td><td>Cell Pellet</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: BSP<a name=\"IGENE-SAMPLE.58BSP\"> </a></td><td>Blood Spot</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: BS<a name=\"IGENE-SAMPLE.58BS\"> </a></td><td>Buccal Swab</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: BM<a name=\"IGENE-SAMPLE.58BM\"> </a></td><td>Bone Marrow</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: BL<a name=\"IGENE-SAMPLE.58BL\"> </a></td><td>Blood</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: Ascitic fluid<a name=\"IGENE-SAMPLE.58Asciticfluid\"> </a></td><td>Ascitic Fluid</td></tr><tr><td style=\"white-space:nowrap\">SAMPLE: AF<a name=\"IGENE-SAMPLE.58AF\"> </a></td><td>Amniotic Fluid</td></tr><tr><td style=\"white-space:nowrap\">Pl F<a name=\"IGENE-PlF\"> </a></td><td>Pleural fluid</td></tr></table></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:url [
fhir:v "https://fhir.nwgenomics.nhs.uk/CodeSystem/IGENE"^^xsd:anyURI ;
fhir:l <https://fhir.nwgenomics.nhs.uk/CodeSystem/IGENE>
  ] ; # 
  fhir:version [ fhir:v "0.2.1"] ; # 
  fhir:name [ fhir:v "IGENE"] ; # 
  fhir:title [ fhir:v "iGene Codes"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:experimental [ fhir:v false] ; # 
  fhir:date [ fhir:v "2026-02-17"^^xsd:date] ; # 
  fhir:publisher [ fhir:v "NHS North West Genomics"] ; # 
  fhir:contact ( [
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "https://www.nwgenomics.nhs.uk/contact-us" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "iGene Codes"] ; # 
  fhir:jurisdiction ( [
    ( fhir:coding [
fhir:system [
fhir:v "urn:iso:std:iso:3166"^^xsd:anyURI ;
fhir:l <urn:iso:std:iso:3166>       ] ;
fhir:code [ fhir:v "GB" ] ;
fhir:display [ fhir:v "United Kingdom of Great Britain and Northern Ireland" ]     ] )
  ] ) ; # 
  fhir:caseSensitive [ fhir:v true] ; # 
  fhir:content [ fhir:v "fragment"] ; # 
  fhir:concept ( [
fhir:code [ fhir:v "SAMPLE: Urine" ] ;
fhir:display [ fhir:v "Urine" ]
  ] [
fhir:code [ fhir:v "SAMPLE: TC" ] ;
fhir:display [ fhir:v "Tissue" ]
  ] [
fhir:code [ fhir:v "SAMPLE: SALIVA" ] ;
fhir:display [ fhir:v "Saliva" ]
  ] [
fhir:code [ fhir:v "SAMPLE: PERICARDIAL FLUID" ] ;
fhir:display [ fhir:v "Pericardial fluid" ]
  ] [
fhir:code [ fhir:v "SAMPLE: No sample received" ] ;
fhir:display [ fhir:v "No Sample Received" ]
  ] [
fhir:code [ fhir:v "SAMPLE: Lyophilised cell pellet" ] ;
fhir:display [ fhir:v "Lyophilised cell pellet" ]
  ] [
fhir:code [ fhir:v "SAMPLE: Liquid Biopsy" ] ;
fhir:display [ fhir:v "Liquid Biopsy" ]
  ] [
fhir:code [ fhir:v "SAMPLE: FFPE-WB" ] ;
fhir:display [ fhir:v "FFPE - Wax block" ]
  ] [
fhir:code [ fhir:v "SAMPLE: FFPE-SL" ] ;
fhir:display [ fhir:v "FFPE - Slides" ]
  ] [
fhir:code [ fhir:v "SAMPLE: FFPE-SH" ] ;
fhir:display [ fhir:v "FFPE - Shavings" ]
  ] [
fhir:code [ fhir:v "SAMPLE: FFPE-PCS" ] ;
fhir:display [ fhir:v "FFPE - Positively Charged Slides" ]
  ] [
fhir:code [ fhir:v "SAMPLE: Cystic fluid" ] ;
fhir:display [ fhir:v "Cystic fluid" ]
  ] [
fhir:code [ fhir:v "SAMPLE: CVB	Chorionic" ] ;
fhir:display [ fhir:v "Villus Biopsy" ]
  ] [
fhir:code [ fhir:v "SAMPLE: Cult Cells" ] ;
fhir:display [ fhir:v "Cultured Cells" ]
  ] [
fhir:code [ fhir:v "SAMPLE: CSF" ] ;
fhir:display [ fhir:v "Cerebrospinal fluid" ]
  ] [
fhir:code [ fhir:v "SAMPLE: Cell Pellet" ] ;
fhir:display [ fhir:v "Cell Pellet" ]
  ] [
fhir:code [ fhir:v "SAMPLE: BSP" ] ;
fhir:display [ fhir:v "Blood Spot" ]
  ] [
fhir:code [ fhir:v "SAMPLE: BS" ] ;
fhir:display [ fhir:v "Buccal Swab" ]
  ] [
fhir:code [ fhir:v "SAMPLE: BM" ] ;
fhir:display [ fhir:v "Bone Marrow" ]
  ] [
fhir:code [ fhir:v "SAMPLE: BL" ] ;
fhir:display [ fhir:v "Blood" ]
  ] [
fhir:code [ fhir:v "SAMPLE: Ascitic fluid" ] ;
fhir:display [ fhir:v "Ascitic Fluid" ]
  ] [
fhir:code [ fhir:v "SAMPLE: AF" ] ;
fhir:display [ fhir:v "Amniotic Fluid" ]
  ] [
fhir:code [ fhir:v "Pl F" ] ;
fhir:display [ fhir:v "Pleural fluid" ]
  ] ) . #