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PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -

PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build

PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

Logical Model: VariantOccurrence logical model

Official URL: https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/StructureDefinition/pc-variant-occurrence-lm Version: 0.1.0-ci-build
Draft as of 2026-02-09 Computable Name: PcVariantOccurrence

Logical model representing the PROTECT-CHILD data model entity variant_occurrence.

Usages:

  • This Logical Model is not used by any profiles in this Implementation Guide

You can also check for usages in the FHIR IG Statistics

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-variant-occurrence-lm 0..* Base VariantOccurrence logical model
... variantOccurrenceId 1..1 string Variant occurrence id
... targetRegionId 0..1 string Target region id
... referenceSequence 0..1 string Reference sequence
... referenceAllele 0..1 string Reference allele
... alternateAllele 0..1 string Alternate allele
... hgvsC 0..1 string Hgvs c
... hgvsP 0..1 string Hgvs p
... variantReadDepth 0..1 integer Variant read depth
... variantExonNumber 0..1 integer Variant exon number
... copyNumber 0..1 decimal Copy number
... cnvLocus 0..1 string Cnv locus
... fusionBreakpoint 0..1 string Fusion breakpoint
... fusionSupportingReads 0..1 integer Fusion supporting reads
... sequenceAlteration 0..1 string Sequence alteration
... variantFeature 0..1 string Variant feature
... geneticOrigin 0..1 string Genetic origin
... genotype 0..1 CodeableConcept Genotype

doco Documentation for this format

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-variant-occurrence-lm 0..* Base VariantOccurrence logical model
... variantOccurrenceId 1..1 string Variant occurrence id
... targetRegionId 0..1 string Target region id
... referenceSequence 0..1 string Reference sequence
... referenceAllele 0..1 string Reference allele
... alternateAllele 0..1 string Alternate allele
... hgvsC 0..1 string Hgvs c
... hgvsP 0..1 string Hgvs p
... variantReadDepth 0..1 integer Variant read depth
... variantExonNumber 0..1 integer Variant exon number
... copyNumber 0..1 decimal Copy number
... cnvLocus 0..1 string Cnv locus
... fusionBreakpoint 0..1 string Fusion breakpoint
... fusionSupportingReads 0..1 integer Fusion supporting reads
... sequenceAlteration 0..1 string Sequence alteration
... variantFeature 0..1 string Variant feature
... geneticOrigin 0..1 string Genetic origin
... genotype 0..1 CodeableConcept Genotype

doco Documentation for this format
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-variant-occurrence-lm 0..* Base VariantOccurrence logical model
... variantOccurrenceId 1..1 string Variant occurrence id
... targetRegionId 0..1 string Target region id
... referenceSequence 0..1 string Reference sequence
... referenceAllele 0..1 string Reference allele
... alternateAllele 0..1 string Alternate allele
... hgvsC 0..1 string Hgvs c
... hgvsP 0..1 string Hgvs p
... variantReadDepth 0..1 integer Variant read depth
... variantExonNumber 0..1 integer Variant exon number
... copyNumber 0..1 decimal Copy number
... cnvLocus 0..1 string Cnv locus
... fusionBreakpoint 0..1 string Fusion breakpoint
... fusionSupportingReads 0..1 integer Fusion supporting reads
... sequenceAlteration 0..1 string Sequence alteration
... variantFeature 0..1 string Variant feature
... geneticOrigin 0..1 string Genetic origin
... genotype 0..1 CodeableConcept Genotype

doco Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(1 nested mandatory element)

Key Elements View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-variant-occurrence-lm 0..* Base VariantOccurrence logical model
... variantOccurrenceId 1..1 string Variant occurrence id
... targetRegionId 0..1 string Target region id
... referenceSequence 0..1 string Reference sequence
... referenceAllele 0..1 string Reference allele
... alternateAllele 0..1 string Alternate allele
... hgvsC 0..1 string Hgvs c
... hgvsP 0..1 string Hgvs p
... variantReadDepth 0..1 integer Variant read depth
... variantExonNumber 0..1 integer Variant exon number
... copyNumber 0..1 decimal Copy number
... cnvLocus 0..1 string Cnv locus
... fusionBreakpoint 0..1 string Fusion breakpoint
... fusionSupportingReads 0..1 integer Fusion supporting reads
... sequenceAlteration 0..1 string Sequence alteration
... variantFeature 0..1 string Variant feature
... geneticOrigin 0..1 string Genetic origin
... genotype 0..1 CodeableConcept Genotype

doco Documentation for this format

Differential View

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-variant-occurrence-lm 0..* Base VariantOccurrence logical model
... variantOccurrenceId 1..1 string Variant occurrence id
... targetRegionId 0..1 string Target region id
... referenceSequence 0..1 string Reference sequence
... referenceAllele 0..1 string Reference allele
... alternateAllele 0..1 string Alternate allele
... hgvsC 0..1 string Hgvs c
... hgvsP 0..1 string Hgvs p
... variantReadDepth 0..1 integer Variant read depth
... variantExonNumber 0..1 integer Variant exon number
... copyNumber 0..1 decimal Copy number
... cnvLocus 0..1 string Cnv locus
... fusionBreakpoint 0..1 string Fusion breakpoint
... fusionSupportingReads 0..1 integer Fusion supporting reads
... sequenceAlteration 0..1 string Sequence alteration
... variantFeature 0..1 string Variant feature
... geneticOrigin 0..1 string Genetic origin
... genotype 0..1 CodeableConcept Genotype

doco Documentation for this format

Snapshot View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. pc-variant-occurrence-lm 0..* Base VariantOccurrence logical model
... variantOccurrenceId 1..1 string Variant occurrence id
... targetRegionId 0..1 string Target region id
... referenceSequence 0..1 string Reference sequence
... referenceAllele 0..1 string Reference allele
... alternateAllele 0..1 string Alternate allele
... hgvsC 0..1 string Hgvs c
... hgvsP 0..1 string Hgvs p
... variantReadDepth 0..1 integer Variant read depth
... variantExonNumber 0..1 integer Variant exon number
... copyNumber 0..1 decimal Copy number
... cnvLocus 0..1 string Cnv locus
... fusionBreakpoint 0..1 string Fusion breakpoint
... fusionSupportingReads 0..1 integer Fusion supporting reads
... sequenceAlteration 0..1 string Sequence alteration
... variantFeature 0..1 string Variant feature
... geneticOrigin 0..1 string Genetic origin
... genotype 0..1 CodeableConcept Genotype

doco Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(1 nested mandatory element)

 

Other representations of profile: CSV, Excel