Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build
Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build
Molecular Definition Implementation Guide for Molecular Data Types, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/molecular-definition-data-types/ and changes regularly. See the Directory of published versions
| Page standards status: Draft | Maturity Level: 0 |
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"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem encodings</b></p><a name=\"encodings\"> </a><a name=\"hcencodings\"> </a><p>This case-sensitive code system <code>http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/encodings</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">nucleotide-dna-1letter-unambiguous<a name=\"encodings-nucleotide-dna-1letter-unambiguous\"> </a></td><td>Nucleotide DNA 1-letter Unambiguous Symbols</td><td>Single-letter unambiguous symbols for DNA residues (G, A, T, C)</td></tr><tr><td style=\"white-space:nowrap\">nucleotide-rna-1letter-unambiguous<a name=\"encodings-nucleotide-rna-1letter-unambiguous\"> </a></td><td>Nucleotide RNA 1-letter Unambiguous Symbols</td><td>Single-letter unambiguous symbols for RNA residues (G, A, U, C)</td></tr><tr><td style=\"white-space:nowrap\">nucleotide-dna-1letter-with-n<a name=\"encodings-nucleotide-dna-1letter-with-n\"> </a></td><td>Nucleotide DNA 1-letter Symbols Including N</td><td>Single-letter symbols for DNA residues, including N for any nucleotide</td></tr><tr><td style=\"white-space:nowrap\">nucleotide-dna-1letter-ambiguous<a name=\"encodings-nucleotide-dna-1letter-ambiguous\"> </a></td><td>Nucleotide DNA 1-letter Ambiguous Symbols</td><td>Single-letter ambiguous symbols for DNA residues including IUPAC codes</td></tr><tr><td style=\"white-space:nowrap\">amino-acid-1letter-unambiguous<a name=\"encodings-amino-acid-1letter-unambiguous\"> </a></td><td>Amino Acid 1-letter Unambiguous Symbols</td><td>Single-letter unambiguous symbols for the 20 common amino acids</td></tr><tr><td style=\"white-space:nowrap\">amino-acid-3letter-unambiguous<a name=\"encodings-amino-acid-3letter-unambiguous\"> </a></td><td>Amino Acid 3-letter Unambiguous Symbols</td><td>Three-letter unambiguous symbols for the 20 common amino acids</td></tr><tr><td style=\"white-space:nowrap\">amino-acid-1letter-ambiguous<a name=\"encodings-amino-acid-1letter-ambiguous\"> </a></td><td>Amino Acid 1-letter Ambiguous Symbols</td><td>Single-letter symbols for amino acids, including ambiguous symbols</td></tr><tr><td style=\"white-space:nowrap\">amino-acid-3letter-ambiguous<a name=\"encodings-amino-acid-3letter-ambiguous\"> </a></td><td>Amino Acid 3-letter Ambiguous Symbols</td><td>Three-letter symbols for amino acids, including ambiguous symbols</td></tr></table></div>"
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"url" : "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/encodings",
"version" : "1.0.0-ballot1",
"name" : "Encodings",
"title" : "Encodings",
"status" : "draft",
"experimental" : false,
"date" : "2025-09-05T20:30:49+00:00",
"publisher" : "HL7 International / Clinical Genomics",
"contact" : [
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"name" : "HL7 International / Clinical Genomics",
"telecom" : [
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"value" : "http://www.hl7.org/Special/committees/clingenomics"
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"description" : "CodeSystem listing the different encodings for nucleotides and amino acids.",
"jurisdiction" : [
{
"coding" : [
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"code" : "001",
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"caseSensitive" : true,
"content" : "complete",
"count" : 8,
"concept" : [
{
"code" : "nucleotide-dna-1letter-unambiguous",
"display" : "Nucleotide DNA 1-letter Unambiguous Symbols",
"definition" : "Single-letter unambiguous symbols for DNA residues (G, A, T, C)"
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{
"code" : "nucleotide-rna-1letter-unambiguous",
"display" : "Nucleotide RNA 1-letter Unambiguous Symbols",
"definition" : "Single-letter unambiguous symbols for RNA residues (G, A, U, C)"
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{
"code" : "nucleotide-dna-1letter-with-n",
"display" : "Nucleotide DNA 1-letter Symbols Including N",
"definition" : "Single-letter symbols for DNA residues, including N for any nucleotide"
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{
"code" : "nucleotide-dna-1letter-ambiguous",
"display" : "Nucleotide DNA 1-letter Ambiguous Symbols",
"definition" : "Single-letter ambiguous symbols for DNA residues including IUPAC codes"
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{
"code" : "amino-acid-1letter-unambiguous",
"display" : "Amino Acid 1-letter Unambiguous Symbols",
"definition" : "Single-letter unambiguous symbols for the 20 common amino acids"
},
{
"code" : "amino-acid-3letter-unambiguous",
"display" : "Amino Acid 3-letter Unambiguous Symbols",
"definition" : "Three-letter unambiguous symbols for the 20 common amino acids"
},
{
"code" : "amino-acid-1letter-ambiguous",
"display" : "Amino Acid 1-letter Ambiguous Symbols",
"definition" : "Single-letter symbols for amino acids, including ambiguous symbols"
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{
"code" : "amino-acid-3letter-ambiguous",
"display" : "Amino Acid 3-letter Ambiguous Symbols",
"definition" : "Three-letter symbols for amino acids, including ambiguous symbols"
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