Genomics Reporting Implementation Guide
4.0.0-ballot - STU 4 ballot International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 4.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

ValueSet: Genomic Study Type ValueSet (Experimental)

Official URL: http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomic-study-type-vs Version: 4.0.0-ballot
Standards status: Informative Computable Name: GenomicStudyTypeVS

Backport of http://hl7.org/fhir/ValueSet/genomicstudy-type

References

Logical Definition (CLD)

 

Expansion

Expansion performed internally based on codesystem Genomic Study Type CodeSystem v4.0.0-ballot (CodeSystem)

This value set contains 12 concepts

SystemCodeDisplay (en)JSONXML
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  alt-splcAlternative splicing detection
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  chromatinChromatin conformation
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  cnvCNV detection
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  epi-alt-histEpigenetic Alterations - histone modifications
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  epi-alt-dnaEpigenetic Alterations -DNA methylation
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  fam-var-segrFamilial variant segregation
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  func-varFunctional variation detection
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  gene-expressionGene expression profiling
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  post-trans-modPost-translational Modification Identification
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  snpSNP Detection
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  strSTR count
http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-type-cs  struc-varStructural variation detection

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code