Genomics Reporting Implementation Guide
3.0.0 - STU3 International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

Example Observation: Variant-Somatic-Clinical-Trial

Generated Narrative: Observation Variant-Somatic-Clinical-Trial

status: Final

category: Laboratory, Genetics

code: Genetic variant assessment

subject: Adam B. Everyman Male, DoB: 1951-01-20 ( Medical Record Number: m123 (use: usual, ))

effective: 2019-04-01

performer: Organization some lab

value: Present

interpretation: Positive (qualifier value)

method: Sequencing

specimen: Specimen: status = available; type = Tissue

component

code: Gene studied [ID]

value: FGFR2

component

code: Genomic DNA change (gHGVS)

value: NC_000010.11:g.121498525T>G

component

code: Genomic source class [Type]

value: Somatic