Genomics Reporting Implementation Guide
3.0.1-SNAPSHOT - Ballot International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.1-SNAPSHOT built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: GrouperEx03 - JSON Representation

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{
  "resourceType" : "Observation",
  "id" : "GrouperEx03",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"GrouperEx03\"> </a><a name=\"hcGrouperEx03\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation &quot;GrouperEx03&quot; </p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.3.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span>, Genetics <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.3.0/CodeSystem-v2-0074.html\">diagnosticServiceSectionId</a>#GE)</span></p><p><b>code</b>: Group <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.3.0/CodeSystem-v3-nciThesaurus.html\">NCI Thesaurus</a>#C43359)</span></p><p><b>subject</b>: <a href=\"Patient-CGPatientExample01.html\">Patient/CGPatientExample01</a> &quot; EVERYMAN&quot;</p><p><b>effective</b>: 2019-04-01</p><p><b>performer</b>: <a href=\"Organization-ExampleOrg.html\">Organization/ExampleOrg</a> &quot;some lab&quot;</p><p><b>hasMember</b>: </p><ul><li><a href=\"Observation-Pgx-var-1011.html\">Observation/Pgx-var-1011: NC_000010.10(CYP2C19):g.96521657C=</a></li><li><a href=\"Observation-Pgx-var-1012.html\">Observation/Pgx-var-1012: NC_000010.10(CYP2C19):g.96522463A=</a></li><li><a href=\"Observation-Pgx-var-1013.html\">Observation/Pgx-var-1013: NC_000010.10(CYP2C19):g.96535173T=</a></li><li><a href=\"Observation-Pgx-var-1014.html\">Observation/Pgx-var-1014: NC_000010.10(CYP2C19):g.96535210G=</a></li><li><a href=\"Observation-Pgx-var-1015.html\">Observation/Pgx-var-1015: NC_000010.10(CYP2C19):g.96540410G&gt;A</a></li><li><a href=\"Observation-Pgx-var-1016.html\">Observation/Pgx-var-1016: NC_000010.10(CYP2C19):g.96541616G=</a></li><li><a href=\"Observation-Pgx-var-1017.html\">Observation/Pgx-var-1017: NC_000010.10(CYP2C19):g.96541756T=</a></li><li><a href=\"Observation-Pgx-var-1018.html\">Observation/Pgx-var-1018: NC_000010.10(CYP2C19):g.96612495C=</a></li><li><a href=\"Observation-Pgx-var-1019.html\">Observation/Pgx-var-1019: NC_000016.9(VKORC1):g.31096368C&gt;T</a></li><li><a href=\"Observation-Pgx-var-1020.html\">Observation/Pgx-var-1020: NC_000010.10(CYP2C9):g.96702047C=</a></li><li><a href=\"Observation-Pgx-var-1021.html\">Observation/Pgx-var-1021: NC_000010.10(CYP2C9):g.96741053A=</a></li></ul></div>"
  },
  "status" : "final",
  "category" : [
    {
      "coding" : [
        {
          "system" : "http://terminology.hl7.org/CodeSystem/observation-category",
          "code" : "laboratory"
        }
      ]
    },
    {
      "coding" : [
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          "system" : "http://terminology.hl7.org/CodeSystem/v2-0074",
          "code" : "GE"
        }
      ]
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  ],
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    "coding" : [
      {
        "system" : "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl",
        "code" : "C43359",
        "display" : "Group"
      }
    ]
  },
  "subject" : {
    🔗 "reference" : "Patient/CGPatientExample01"
  },
  "effectiveDateTime" : "2019-04-01",
  "performer" : [
    {
      🔗 "reference" : "Organization/ExampleOrg"
    }
  ],
  "hasMember" : [
    {
      🔗 "reference" : "Observation/Pgx-var-1011",
      "display" : "NC_000010.10(CYP2C19):g.96521657C="
    },
    {
      🔗 "reference" : "Observation/Pgx-var-1012",
      "display" : "NC_000010.10(CYP2C19):g.96522463A="
    },
    {
      🔗 "reference" : "Observation/Pgx-var-1013",
      "display" : "NC_000010.10(CYP2C19):g.96535173T="
    },
    {
      🔗 "reference" : "Observation/Pgx-var-1014",
      "display" : "NC_000010.10(CYP2C19):g.96535210G="
    },
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      🔗 "reference" : "Observation/Pgx-var-1015",
      "display" : "NC_000010.10(CYP2C19):g.96540410G>A"
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    {
      🔗 "reference" : "Observation/Pgx-var-1016",
      "display" : "NC_000010.10(CYP2C19):g.96541616G="
    },
    {
      🔗 "reference" : "Observation/Pgx-var-1017",
      "display" : "NC_000010.10(CYP2C19):g.96541756T="
    },
    {
      🔗 "reference" : "Observation/Pgx-var-1018",
      "display" : "NC_000010.10(CYP2C19):g.96612495C="
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      🔗 "reference" : "Observation/Pgx-var-1019",
      "display" : "NC_000016.9(VKORC1):g.31096368C>T"
    },
    {
      🔗 "reference" : "Observation/Pgx-var-1020",
      "display" : "NC_000010.10(CYP2C9):g.96702047C="
    },
    {
      🔗 "reference" : "Observation/Pgx-var-1021",
      "display" : "NC_000010.10(CYP2C9):g.96741053A="
    }
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}