Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: GenRiskDiabetesT2 - JSON Representation

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{
  "resourceType" : "RiskAssessment",
  "id" : "GenRiskDiabetesT2",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: RiskAssessment GenRiskDiabetesT2</b></p><a name=\"GenRiskDiabetesT2\"> </a><a name=\"hcGenRiskDiabetesT2\"> </a><a name=\"GenRiskDiabetesT2-en-US\"> </a><p><b>parent</b>: <a href=\"Observation-PolyGenicDiagnosticImpExample.html\">Observation Diagnostic Implication</a></p><p><b>status</b>: Final</p><p><b>subject</b>: <a href=\"Patient-CGPatientExample01.html\">Adam B. Everyman  Male, DoB: 1951-01-20 ( Medical Record Number: m123\u00a0(use:\u00a0usual,\u00a0))</a></p><p><b>basis</b>: </p><ul><li>Variant 1 (Identifier: <code>http://hospital.example.org</code>/11)</li><li>Variant 2 (Identifier: <code>http://hospital.example.org</code>/12)</li><li>Variant 3 (Identifier: <code>http://hospital.example.org</code>/13)</li><li>Variant 4 (Identifier: <code>http://hospital.example.org</code>/14)</li><li>Variant 5 (Identifier: <code>http://hospital.example.org</code>/15)</li><li>Variant 6 (Identifier: <code>http://hospital.example.org</code>/16)</li><li>Variant 7 (Identifier: <code>http://hospital.example.org</code>/17)</li></ul><blockquote><p><b>prediction</b></p><p><b>outcome</b>: <span title=\"Codes:{http://snomed.info/sct 44054006}\">Diabetes mellitus type 2 (disorder)</span></p><p><b>probability</b>: 0.26</p><p><b>qualitativeRisk</b>: <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/risk-probability low}\">Low likelihood</span></p><p><b>relativeRisk</b>: 1.05</p><p><b>when</b>: ?-53</p></blockquote><blockquote><p><b>prediction</b></p><p><b>outcome</b>: <span title=\"Codes:{http://snomed.info/sct 44054006}\">Diabetes mellitus type 2 (disorder)</span></p><p><b>probability</b>: 0.7</p><p><b>qualitativeRisk</b>: <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/risk-probability high}\">High likelihood</span></p><p><b>relativeRisk</b>: 2.69</p><p><b>when</b>: ?-65</p></blockquote></div>"
  },
  "parent" : {
    🔗 "reference" : "Observation/PolyGenicDiagnosticImpExample"
  },
  "status" : "final",
  "subject" : {
    🔗 "reference" : "Patient/CGPatientExample01"
  },
  "basis" : [
    {
      "identifier" : {
        "system" : "http://hospital.example.org",
        "value" : "11"
      },
      "display" : "Variant 1"
    },
    {
      "identifier" : {
        "system" : "http://hospital.example.org",
        "value" : "12"
      },
      "display" : "Variant 2"
    },
    {
      "identifier" : {
        "system" : "http://hospital.example.org",
        "value" : "13"
      },
      "display" : "Variant 3"
    },
    {
      "identifier" : {
        "system" : "http://hospital.example.org",
        "value" : "14"
      },
      "display" : "Variant 4"
    },
    {
      "identifier" : {
        "system" : "http://hospital.example.org",
        "value" : "15"
      },
      "display" : "Variant 5"
    },
    {
      "identifier" : {
        "system" : "http://hospital.example.org",
        "value" : "16"
      },
      "display" : "Variant 6"
    },
    {
      "identifier" : {
        "system" : "http://hospital.example.org",
        "value" : "17"
      },
      "display" : "Variant 7"
    }
  ],
  "prediction" : [
    {
      "outcome" : {
        "coding" : [
          {
            "system" : "http://snomed.info/sct",
            "code" : "44054006",
            "display" : "Diabetes mellitus type 2 (disorder)"
          }
        ]
      },
      "probabilityDecimal" : 0.26,
      "qualitativeRisk" : {
        "coding" : [
          {
            "system" : "http://terminology.hl7.org/CodeSystem/risk-probability",
            "code" : "low",
            "display" : "Low likelihood"
          }
        ]
      },
      "relativeRisk" : 1.05,
      "whenRange" : {
        "high" : {
          "value" : 53,
          "unit" : "years",
          "system" : "http://unitsofmeasure.org",
          "code" : "a"
        }
      }
    },
    {
      "outcome" : {
        "coding" : [
          {
            "system" : "http://snomed.info/sct",
            "code" : "44054006",
            "display" : "Diabetes mellitus type 2 (disorder)"
          }
        ]
      },
      "probabilityDecimal" : 0.7,
      "qualitativeRisk" : {
        "coding" : [
          {
            "system" : "http://terminology.hl7.org/CodeSystem/risk-probability",
            "code" : "high",
            "display" : "High likelihood"
          }
        ]
      },
      "relativeRisk" : 2.69,
      "whenRange" : {
        "high" : {
          "value" : 65,
          "unit" : "years",
          "system" : "http://unitsofmeasure.org",
          "code" : "a"
        }
      }
    }
  ]
}