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PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build -

PROTECT-CHILD Pediatric Transplant Data Implementation Guide
0.1.0-ci-build - ci-build

PROTECT-CHILD Pediatric Transplant Data Implementation Guide, published by Protect Child. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/protect-child/ and changes regularly. See the Directory of published versions

Logical Model: PcBioSample - Detailed Descriptions

Draft as of 2026-02-09

Definitions for the pc-bio-sample-lm logical model.

Guidance on how to interpret the contents of this table can be foundhere

0. pc-bio-sample-lm
Definition

Logical model representing the PROTECT-CHILD data model entity bio_sample.

ShortBioSample logical model
Control0..*
Is Modifierfalse
Logical ModelInstances of this logical model are not marked to be the target of a Reference
2. pc-bio-sample-lm.bioSampleId
Definition

Field bio_sample_id from the PROTECT-CHILD data model.

ShortBio sample id
Control1..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
4. pc-bio-sample-lm.patientId
Definition

Field patient_id from the PROTECT-CHILD data model. Foreign key to patient.

ShortPatient id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
6. pc-bio-sample-lm.genomicTestId
Definition

Field genomic_test_id from the PROTECT-CHILD data model.

ShortGenomic test id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
8. pc-bio-sample-lm.epigenomeStudyId
Definition

Field epigenome_study_id from the PROTECT-CHILD data model.

ShortEpigenome study id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
10. pc-bio-sample-lm.methylomicStudyId
Definition

Field methylomic_study_id from the PROTECT-CHILD data model.

ShortMethylomic study id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
12. pc-bio-sample-lm.collectionDate
Definition

Field collection_date from the PROTECT-CHILD data model.

ShortCollection date
Control0..1
TypedateTime
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
14. pc-bio-sample-lm.sendIngemmDate
Definition

Field send_ingemm_date from the PROTECT-CHILD data model.

ShortSend ingemm date
Control0..1
TypedateTime
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
16. pc-bio-sample-lm.tissueType
Definition

Field tissue_type from the PROTECT-CHILD data model.

ShortTissue type
Control0..1
TypeCodeableConcept
18. pc-bio-sample-lm.dnaConcentration
Definition

Field dna_concentration from the PROTECT-CHILD data model.

ShortDna concentration
Control0..1
Typedecimal
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension

Guidance on how to interpret the contents of this table can be foundhere

0. pc-bio-sample-lm
Definition

Logical model representing the PROTECT-CHILD data model entity bio_sample.

ShortBioSample logical model
Logical ModelInstances of this logical model are not marked to be the target of a Reference
2. pc-bio-sample-lm.bioSampleId
Definition

Field bio_sample_id from the PROTECT-CHILD data model.

ShortBio sample id
Control1..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
4. pc-bio-sample-lm.patientId
Definition

Field patient_id from the PROTECT-CHILD data model. Foreign key to patient.

ShortPatient id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
6. pc-bio-sample-lm.genomicTestId
Definition

Field genomic_test_id from the PROTECT-CHILD data model.

ShortGenomic test id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
8. pc-bio-sample-lm.epigenomeStudyId
Definition

Field epigenome_study_id from the PROTECT-CHILD data model.

ShortEpigenome study id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
10. pc-bio-sample-lm.methylomicStudyId
Definition

Field methylomic_study_id from the PROTECT-CHILD data model.

ShortMethylomic study id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
12. pc-bio-sample-lm.collectionDate
Definition

Field collection_date from the PROTECT-CHILD data model.

ShortCollection date
Control0..1
TypedateTime
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
14. pc-bio-sample-lm.sendIngemmDate
Definition

Field send_ingemm_date from the PROTECT-CHILD data model.

ShortSend ingemm date
Control0..1
TypedateTime
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
16. pc-bio-sample-lm.tissueType
Definition

Field tissue_type from the PROTECT-CHILD data model.

ShortTissue type
Control0..1
TypeCodeableConcept
18. pc-bio-sample-lm.dnaConcentration
Definition

Field dna_concentration from the PROTECT-CHILD data model.

ShortDna concentration
Control0..1
Typedecimal
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension

Guidance on how to interpret the contents of this table can be foundhere

0. pc-bio-sample-lm
Definition

Logical model representing the PROTECT-CHILD data model entity bio_sample.

ShortBioSample logical model
Control0..*
Is Modifierfalse
Logical ModelInstances of this logical model are not marked to be the target of a Reference
2. pc-bio-sample-lm.bioSampleId
Definition

Field bio_sample_id from the PROTECT-CHILD data model.

ShortBio sample id
Control1..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
4. pc-bio-sample-lm.patientId
Definition

Field patient_id from the PROTECT-CHILD data model. Foreign key to patient.

ShortPatient id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
6. pc-bio-sample-lm.genomicTestId
Definition

Field genomic_test_id from the PROTECT-CHILD data model.

ShortGenomic test id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
8. pc-bio-sample-lm.epigenomeStudyId
Definition

Field epigenome_study_id from the PROTECT-CHILD data model.

ShortEpigenome study id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
10. pc-bio-sample-lm.methylomicStudyId
Definition

Field methylomic_study_id from the PROTECT-CHILD data model.

ShortMethylomic study id
Control0..1
Typestring
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
12. pc-bio-sample-lm.collectionDate
Definition

Field collection_date from the PROTECT-CHILD data model.

ShortCollection date
Control0..1
TypedateTime
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
14. pc-bio-sample-lm.sendIngemmDate
Definition

Field send_ingemm_date from the PROTECT-CHILD data model.

ShortSend ingemm date
Control0..1
TypedateTime
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
16. pc-bio-sample-lm.tissueType
Definition

Field tissue_type from the PROTECT-CHILD data model.

ShortTissue type
Control0..1
TypeCodeableConcept
18. pc-bio-sample-lm.dnaConcentration
Definition

Field dna_concentration from the PROTECT-CHILD data model.

ShortDna concentration
Control0..1
Typedecimal
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension