RIVO-Noord Zorgviewer Implementation Guide
1.8.0 - CI build
RIVO-Noord Zorgviewer Implementation Guide, published by RIVO-NN HL7NL. This guide is not an authorized publication; it is the continuous build for version 1.8.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/RIVO-Noord/zorgviewer-ig/ and changes regularly. See the Directory of published versions
Active as of 2024-11-19 |
Definitions for the Specimen resource profile.
Guidance on how to interpret the contents of this table can be found here
0. Specimen | |
2. Specimen.type | |
4. Specimen.type.text | |
Must Support | true |
6. Specimen.note | |
8. Specimen.note.text | |
Must Support | true |
Guidance on how to interpret the contents of this table can be found here
0. Specimen | |
Definition | A sample to be used for analysis. The HCIM LaboratoryTestResult only contains Specimen details at container and collection level. It is not prohibited, rather expected that other details will be present too. A sample to be used for analysis. |
Short | SpecimenSample for analysis |
Control | 0..* |
Alternate Names | Monster |
Invariants | dom-2: If the resource is contained in another resource, it SHALL NOT contain nested Resources (contained.contained.empty() )dom-1: If the resource is contained in another resource, it SHALL NOT contain any narrative ( contained.text.empty() )dom-4: If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated ( contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() )dom-3: If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource ( contained.where(('#'+id in %resource.descendants().reference).not()).empty() )dom-2: If the resource is contained in another resource, it SHALL NOT contain nested Resources (contained.contained.empty()) dom-1: If the resource is contained in another resource, it SHALL NOT contain any narrative (contained.text.empty()) dom-4: If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated (contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()) dom-3: If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource (contained.where(('#'+id in %resource.descendants().reference).not()).empty()) |
2. Specimen.implicitRules | |
Definition | A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. |
Short | A set of rules under which this content was created |
Comments | Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. This element is labelled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation. |
Control | 0..1 |
Type | uri |
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Summary | true |
4. Specimen.modifierExtension | |
Definition | May be used to represent additional information that is not part of the basic definition of the resource, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. |
Short | Extensions that cannot be ignored |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Control | 0..* |
Type | Extension |
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR |
Alternate Names | extensions, user content |
6. Specimen.status | |
Definition | The availability of the specimen. |
Short | available | unavailable | unsatisfactory | entered-in-error |
Comments | This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid. |
Control | 0..1 |
Binding | The codes SHALL be taken from SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status (required to http://hl7.org/fhir/ValueSet/specimen-status )Codes providing the status/availability of a specimen. |
Type | code |
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Summary | true |
8. Specimen.type | |
Definition | SpecimenMaterial describes the material obtained or the isolate that was derived from the material. If the LOINC test code also implicitly describes a material, this element may not conflict with the description. If desired, this component can provide a more detailed description of the material: LOINC codes only contain the materials at a main level. This is in line with the agreements made in the IHE/Nictiz program e-Lab. If the test is carried out on derived material (such as plasma), this element will still contain the material drawn (in this case, blood). In this case, the LOINC code will generally refer to plasma. The kind of material that forms the specimen. |
Short | SpecimenMaterialKind of material that forms the specimen |
Comments | The type can change the way that a specimen is handled, and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems. |
Control | 0..1 |
Binding | Unless not suitable, these codes SHALL be taken from For example codes, see MonstermateriaalCodelijsthttp://hl7.org/fhir/ValueSet/v2-0487 (extensible to http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.13.1.6--20171231000000 ) |
Type | CodeableConcept |
Summary | true |
Alternate Names | Monstermateriaal |
10. Specimen.type.text | |
Definition | A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user. |
Short | Plain text representation of the concept |
Comments | Very often the text is the same as a displayName of one of the codings. |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Must Support | true |
Summary | true |
Requirements | The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source. |
12. Specimen.subject | |
Definition | If the material is not collected directly from the patient but comes from a patient-related object, e.g. a cathetertip, this source of material can be recorded here using the HCIM MedicalDeviceProduct. Where the specimen came from. This may be from the patient(s) or from the environment or a device. |
Short | SpecimenSourceWhere the specimen came from. This may be from the patient(s) or from the environment or a device |
Control | 1..1 |
Type | Reference(nl-core-patient, Group, HCIM MedicalDevice Product, Substance, Patient, Device) |
Summary | true |
Requirements | Must know the subject context. |
Alternate Names | BronMonster |
14. Specimen.note | |
Definition | To communicate any details or issues about the specimen or during the specimen collection. (for example: broken vial, sent with patient, frozen). |
Short | CommentComments |
Control | 0..* |
Type | Annotation |
Alternate Names | Toelichting |
16. Specimen.note.text | |
Definition | The text of the annotation. |
Short | The annotation - text content |
Control | 1..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Must Support | true |
Guidance on how to interpret the contents of this table can be found here
0. Specimen | |||||
Definition | A sample to be used for analysis. The HCIM LaboratoryTestResult only contains Specimen details at container and collection level. It is not prohibited, rather expected that other details will be present too. | ||||
Short | Specimen | ||||
Control | 0..* | ||||
Alternate Names | Monster | ||||
Invariants | dom-2: If the resource is contained in another resource, it SHALL NOT contain nested Resources (contained.contained.empty() )dom-1: If the resource is contained in another resource, it SHALL NOT contain any narrative ( contained.text.empty() )dom-4: If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated ( contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() )dom-3: If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource ( contained.where(('#'+id in %resource.descendants().reference).not()).empty() ) | ||||
2. Specimen.id | |||||
Definition | The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes. | ||||
Short | Logical id of this artifact | ||||
Comments | The only time that a resource does not have an id is when it is being submitted to the server using a create operation. | ||||
Control | 0..1 | ||||
Type | id | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
4. Specimen.meta | |||||
Definition | The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content may not always be associated with version changes to the resource. | ||||
Short | Metadata about the resource | ||||
Control | 0..1 | ||||
Type | Meta | ||||
Summary | true | ||||
6. Specimen.implicitRules | |||||
Definition | A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. | ||||
Short | A set of rules under which this content was created | ||||
Comments | Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. This element is labelled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies it's meaning or interpretation. | ||||
Control | 0..1 | ||||
Type | uri | ||||
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
8. Specimen.language | |||||
Definition | The base language in which the resource is written. | ||||
Short | Language of the resource content | ||||
Comments | Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute). | ||||
Control | 0..1 | ||||
Binding | Unless not suitable, these codes SHALL be taken from Common Languages (extensible to http://hl7.org/fhir/ValueSet/languages )A human language.
| ||||
Type | code | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
10. Specimen.text | |||||
Definition | A human-readable narrative that contains a summary of the resource, and may be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it "clinically safe" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety. | ||||
Short | Text summary of the resource, for human interpretation | ||||
Comments | Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded in formation is added later. | ||||
Control | 0..1 This element is affected by the following invariants: dom-1 | ||||
Type | Narrative | ||||
Alternate Names | narrative, html, xhtml, display | ||||
12. Specimen.contained | |||||
Definition | These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope. | ||||
Short | Contained, inline Resources | ||||
Comments | This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. | ||||
Control | 0..* | ||||
Type | Resource | ||||
Alternate Names | inline resources, anonymous resources, contained resources | ||||
14. Specimen.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the resource. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
16. Specimen.modifierExtension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the resource, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. | ||||
Short | Extensions that cannot be ignored | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR | ||||
Alternate Names | extensions, user content | ||||
18. Specimen.identifier | |||||
Definition | Identification number of the material obtained, as a reference for inquiries to the source organization. In a transmural setting, this number will consist of a specimen number including the identification of the issuing organization, to be unique outside of the borders of an organization. | ||||
Short | SpecimenId | ||||
Note | This is a business identifier, not a resource identifier (see discussion) | ||||
Control | 0..* | ||||
Type | Identifier | ||||
Summary | true | ||||
Alternate Names | Monsternummer | ||||
20. Specimen.accessionIdentifier | |||||
Definition | The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. | ||||
Short | Identifier assigned by the lab | ||||
Control | 0..1 | ||||
Type | Identifier | ||||
Summary | true | ||||
22. Specimen.status | |||||
Definition | The availability of the specimen. | ||||
Short | available | unavailable | unsatisfactory | entered-in-error | ||||
Comments | This element is labeled as a modifier because the status contains codes that mark the resource as not currently valid. | ||||
Control | 0..1 | ||||
Binding | The codes SHALL be taken from SpecimenStatus (required to http://hl7.org/fhir/ValueSet/specimen-status )Codes providing the status/availability of a specimen. | ||||
Type | code | ||||
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
24. Specimen.type | |||||
Definition | SpecimenMaterial describes the material obtained or the isolate that was derived from the material. If the LOINC test code also implicitly describes a material, this element may not conflict with the description. If desired, this component can provide a more detailed description of the material: LOINC codes only contain the materials at a main level. This is in line with the agreements made in the IHE/Nictiz program e-Lab. If the test is carried out on derived material (such as plasma), this element will still contain the material drawn (in this case, blood). In this case, the LOINC code will generally refer to plasma. | ||||
Short | SpecimenMaterial | ||||
Comments | The type can change the way that a specimen is handled, and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems. | ||||
Control | 0..1 | ||||
Binding | Unless not suitable, these codes SHALL be taken from MonstermateriaalCodelijst (extensible to http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.13.1.6--20171231000000 ) | ||||
Type | CodeableConcept | ||||
Summary | true | ||||
Alternate Names | Monstermateriaal | ||||
26. Specimen.type.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
28. Specimen.type.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
Slicing | This element introduces a set of slices on Specimen.type.extension . The slices areUnordered and Open, and can be differentiated using the following discriminators: | ||||
30. Specimen.type.coding | |||||
Definition | A reference to a code defined by a terminology system. | ||||
Short | Code defined by a terminology system | ||||
Comments | Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true. | ||||
Control | 0..* | ||||
Type | Coding | ||||
Summary | true | ||||
Requirements | Allows for translations and alternate encodings within a code system. Also supports communication of the same instance to systems requiring different encodings. | ||||
32. Specimen.type.text | |||||
Definition | A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user. | ||||
Short | Plain text representation of the concept | ||||
Comments | Very often the text is the same as a displayName of one of the codings. | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Must Support | true | ||||
Summary | true | ||||
Requirements | The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source. | ||||
34. Specimen.subject | |||||
Definition | If the material is not collected directly from the patient but comes from a patient-related object, e.g. a cathetertip, this source of material can be recorded here using the HCIM MedicalDeviceProduct. | ||||
Short | SpecimenSource | ||||
Control | 1..1 | ||||
Type | Reference(nl-core-patient, Group, HCIM MedicalDevice Product, Substance) | ||||
Summary | true | ||||
Requirements | Must know the subject context. | ||||
Alternate Names | BronMonster | ||||
36. Specimen.receivedTime | |||||
Definition | Date and time that the material is handed over at the laboratory or specimen collection center. This is the issue with material that is collected by the patient himself. | ||||
Short | ReceivedDateTime | ||||
Control | 0..1 | ||||
Type | dateTime | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
Alternate Names | AannameDatumTijd | ||||
38. Specimen.parent | |||||
Definition | Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen. | ||||
Short | Specimen from which this specimen originated | ||||
Comments | The parent specimen could be the source from which the current specimen is derived by some processing step (e.g. an aliquot or isolate or extracted nucleic acids from clinical samples) or one of many specimens that were combined to create a pooled sample. | ||||
Control | 0..* | ||||
Type | Reference(HCIM LaboratoryTestResult Specimen, HCIM LaboratoryTestResult Specimen Isolate) | ||||
40. Specimen.request | |||||
Definition | Details concerning a test or procedure request that required a specimen to be collected. | ||||
Short | Why the specimen was collected | ||||
Comments | The request may be explicit or implied such with a ProcedureRequest that requires a blood draw. | ||||
Control | 0..* | ||||
Type | Reference(ProcedureRequest) | ||||
42. Specimen.collection | |||||
Definition | Details concerning the specimen collection. | ||||
Short | Collection details | ||||
Control | 0..1 | ||||
Type | BackboneElement | ||||
Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() | (children().count() > id.count()) ) | ||||
44. Specimen.collection.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
46. Specimen.collection.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
48. Specimen.collection.modifierExtension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. | ||||
Short | Extensions that cannot be ignored | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR | ||||
Summary | true | ||||
Alternate Names | extensions, user content, modifiers | ||||
50. Specimen.collection.collector | |||||
Definition | Person who collected the specimen. | ||||
Short | Who collected the specimen | ||||
Control | 0..1 | ||||
Type | Reference(Practitioner) | ||||
Summary | true | ||||
52. Specimen.collection.collected[x] | |||||
Definition | Time at which the material was collected. If the material has not been collected at a single point in time but over a certain period, this period can be captured in this concept. An example is 24 hour urine. | ||||
Short | Collection time | ||||
Control | 0..1 | ||||
Type | Choice of: dateTime, Period | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
Slicing | This element introduces a set of slices on Specimen.collection.collected[x] . The slices areUnordered and Closed, and can be differentiated using the following discriminators: | ||||
54. Specimen.collection.collected[x]:collectedDateTime | |||||
Slice Name | collectedDateTime | ||||
Definition | Time when specimen was collected from subject - the physiologically relevant time. | ||||
Short | CollectionDateTime | ||||
Control | 0..1 | ||||
Type | dateTime | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
Alternate Names | AfnameDatumTijd | ||||
56. Specimen.collection.collected[x]:collectedPeriod | |||||
Slice Name | collectedPeriod | ||||
Definition | Time when specimen was collected from subject - the physiologically relevant time. | ||||
Short | CollectionPeriod | ||||
Control | 0..1 | ||||
Type | Period | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Summary | true | ||||
Alternate Names | Verzamelperiode | ||||
58. Specimen.collection.collected[x]:collectedPeriod.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
60. Specimen.collection.collected[x]:collectedPeriod.extension | |||||
Definition | An Extension | ||||
Short | Extension | ||||
Control | 0..* | ||||
Type | Extension | ||||
Slicing | This element introduces a set of slices on Specimen.collection.collected[x].extension . The slices areUnordered and Open, and can be differentiated using the following discriminators: | ||||
62. Specimen.collection.collected[x]:collectedPeriod.extension:period-duration | |||||
Slice Name | period-duration | ||||
Definition | Optional Extension Element - found in all resources. | ||||
Short | Optional Extensions Element | ||||
Control | 0..1 | ||||
Type | Extension(Period Duration) (Extension Type: Duration) | ||||
64. Specimen.collection.collected[x]:collectedPeriod.start | |||||
Definition | The start of the period. The boundary is inclusive. | ||||
Short | Starting time with inclusive boundary | ||||
Comments | If the low element is missing, the meaning is that the low boundary is not known. | ||||
Control | 0..1 This element is affected by the following invariants: per-1 | ||||
Type | dateTime | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
66. Specimen.collection.collected[x]:collectedPeriod.end | |||||
Definition | The end of the period. If the end of the period is missing, it means that the period is ongoing. The start may be in the past, and the end date in the future, which means that period is expected/planned to end at that time. | ||||
Short | End time with inclusive boundary, if not ongoing | ||||
Comments | The high value includes any matching date/time. i.e. 2012-02-03T10:00:00 is in a period that has a end value of 2012-02-03. | ||||
Control | 0..1 This element is affected by the following invariants: per-1 | ||||
Type | dateTime | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
Meaning if Missing | If the end of the period is missing, it means that the period is ongoing | ||||
68. Specimen.collection.quantity | |||||
Definition | Total volume of the collected material. If it is necessary to determine the absolute amount of a particular substance in the collected material, the volume thereof must be given. | ||||
Short | CollectedVolume | ||||
Control | 0..1 | ||||
Type | Quantity(SimpleQuantity) | ||||
Alternate Names | Verzamelvolume | ||||
70. Specimen.collection.method | |||||
Definition | If relevant for the results, the method of obtaining the specimen can be entered as well. | ||||
Short | CollectionMethod | ||||
Control | 0..1 | ||||
Binding | Unless not suitable, these codes SHALL be taken from AfnameprocedureCodelijst (extensible to http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.13.1.2--20171231000000 ) | ||||
Type | CodeableConcept | ||||
Alternate Names | Afnameprocedure | ||||
72. Specimen.collection.bodySite | |||||
Definition | Anatomic location where the material is collected, e.g. elbow. | ||||
Short | AnatomicalLocation | ||||
Comments | If the use case requires BodySite to be handled as a separate resource instead of an inline coded element (e.g. to identify and track separately) then use the standard extension body-site-instance. | ||||
Control | 0..1 | ||||
Binding | Unless not suitable, these codes SHALL be taken from MonsterAnatomischeLocatieCodelijst (extensible to http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.13.1.11--20171231000000 )SpecimenAnatomicalLocationCodelist | ||||
Type | CodeableConcept | ||||
Alternate Names | AnatomischeLocatie | ||||
74. Specimen.collection.bodySite.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
76. Specimen.collection.bodySite.extension | |||||
Definition | An Extension | ||||
Short | Extension | ||||
Control | 0..* | ||||
Type | Extension | ||||
Slicing | This element introduces a set of slices on Specimen.collection.bodySite.extension . The slices areUnordered and Open, and can be differentiated using the following discriminators: | ||||
78. Specimen.collection.bodySite.extension:laterality | |||||
Slice Name | laterality | ||||
Definition | Laterality adds information about body side to the anatomic location, e.g. left | ||||
Short | Laterality | ||||
Control | 0..* | ||||
Type | Extension(BodySite Qualifier) (Extension Type: CodeableConcept) | ||||
80. Specimen.collection.bodySite.extension:laterality.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
82. Specimen.collection.bodySite.extension:laterality.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
Slicing | This element introduces a set of slices on Specimen.collection.bodySite.extension.extension . The slices areUnordered and Open, and can be differentiated using the following discriminators: | ||||
84. Specimen.collection.bodySite.extension:laterality.url | |||||
Definition | Source of the definition for the extension code - a logical name or a URL. | ||||
Short | identifies the meaning of the extension | ||||
Comments | The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension. | ||||
Control | 1..1 | ||||
Type | uri | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
Fixed Value | http://nictiz.nl/fhir/StructureDefinition/BodySite-Qualifier | ||||
86. Specimen.collection.bodySite.extension:laterality.value[x] | |||||
Definition | Value of extension - may be a resource or one of a constrained set of the data types (see Extensibility in the spec for list). | ||||
Short | Value of extension | ||||
Control | 0..1 | ||||
Type | CodeableConcept | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Slicing | This element introduces a set of slices on Specimen.collection.bodySite.extension.value[x] . The slices areUnordered and Closed, and can be differentiated using the following discriminators: | ||||
88. Specimen.collection.bodySite.extension:laterality.value[x]:valueCodeableConcept | |||||
Slice Name | valueCodeableConcept | ||||
Definition | Qualifier to refine the anatomical location. These include qualifiers for laterality, relative location, directionality, number, and plane. | ||||
Short | BodySite qualifier | ||||
Control | 0..1 | ||||
Binding | Unless not suitable, these codes SHALL be taken from LateraliteitCodelijst (extensible to http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.13.1.12--20171231000000 )LateralityCodelist | ||||
Type | CodeableConcept | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
90. Specimen.collection.bodySite.extension:morphology | |||||
Slice Name | morphology | ||||
Definition | Morphology describes morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer. | ||||
Short | Morphology | ||||
Control | 0..* | ||||
Type | Extension(BodySite Morphology) (Extension Type: CodeableConcept) | ||||
Alternate Names | Morfologie | ||||
92. Specimen.collection.bodySite.extension:morphology.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
94. Specimen.collection.bodySite.extension:morphology.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
Slicing | This element introduces a set of slices on Specimen.collection.bodySite.extension.extension . The slices areUnordered and Open, and can be differentiated using the following discriminators: | ||||
96. Specimen.collection.bodySite.extension:morphology.url | |||||
Definition | Source of the definition for the extension code - a logical name or a URL. | ||||
Short | identifies the meaning of the extension | ||||
Comments | The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension. | ||||
Control | 1..1 | ||||
Type | uri | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
Fixed Value | http://nictiz.nl/fhir/StructureDefinition/BodySite-Morphology | ||||
98. Specimen.collection.bodySite.extension:morphology.value[x] | |||||
Definition | Value of extension - may be a resource or one of a constrained set of the data types (see Extensibility in the spec for list). | ||||
Short | Value of extension | ||||
Control | 0..1 | ||||
Type | CodeableConcept | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Slicing | This element introduces a set of slices on Specimen.collection.bodySite.extension.value[x] . The slices areUnordered and Closed, and can be differentiated using the following discriminators: | ||||
100. Specimen.collection.bodySite.extension:morphology.value[x]:valueCodeableConcept | |||||
Slice Name | valueCodeableConcept | ||||
Definition | Morphology describes morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer. | ||||
Short | BodySite morphology | ||||
Control | 0..1 | ||||
Binding | Unless not suitable, these codes SHALL be taken from MorfologieCodelijst (extensible to http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.13.1.13--20171231000000 )MorphologyCodelist | ||||
Type | CodeableConcept | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Alternate Names | Morfologie | ||||
102. Specimen.collection.bodySite.coding | |||||
Definition | A reference to a code defined by a terminology system. | ||||
Short | Code defined by a terminology system | ||||
Comments | Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true. | ||||
Control | 0..* | ||||
Type | Coding | ||||
Summary | true | ||||
Requirements | Allows for translations and alternate encodings within a code system. Also supports communication of the same instance to systems requiring different encodings. | ||||
104. Specimen.collection.bodySite.text | |||||
Definition | A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user. | ||||
Short | Plain text representation of the concept | ||||
Comments | Very often the text is the same as a displayName of one of the codings. | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
Requirements | The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source. | ||||
106. Specimen.processing | |||||
Definition | Details concerning processing and processing steps for the specimen. | ||||
Short | Processing and processing step details | ||||
Control | 0..* | ||||
Type | BackboneElement | ||||
Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() | (children().count() > id.count()) ) | ||||
108. Specimen.processing.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
110. Specimen.processing.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
112. Specimen.processing.modifierExtension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. | ||||
Short | Extensions that cannot be ignored | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR | ||||
Summary | true | ||||
Alternate Names | extensions, user content, modifiers | ||||
114. Specimen.processing.description | |||||
Definition | Textual description of procedure. | ||||
Short | Textual description of procedure | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
116. Specimen.processing.procedure | |||||
Definition | A coded value specifying the procedure used to process the specimen. | ||||
Short | Indicates the treatment step applied to the specimen | ||||
Control | 0..1 | ||||
Binding | For example codes, see SpecimenProcessingProcedure (example to http://hl7.org/fhir/ValueSet/specimen-processing-procedure )Type indicating the technique used to process the specimen | ||||
Type | CodeableConcept | ||||
118. Specimen.processing.additive | |||||
Definition | Material used in the processing step. | ||||
Short | Material used in the processing step | ||||
Control | 0..* | ||||
Type | Reference(Substance) | ||||
120. Specimen.processing.time[x] | |||||
Definition | A record of the time or period when the specimen processing occurred. For example the time of sample fixation or the period of time the sample was in formalin. | ||||
Short | Date and time of specimen processing | ||||
Control | 0..1 | ||||
Type | Choice of: dateTime, Period | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
122. Specimen.container | |||||
Definition | The container holding the specimen. The recursive nature of containers; i.e. blood in tube in tray in rack is not addressed here. | ||||
Short | SpecimenContainer | ||||
Control | 0..* | ||||
Type | BackboneElement | ||||
Alternate Names | Monstercontainer | ||||
Invariants | ele-1: All FHIR elements must have a @value or children (hasValue() | (children().count() > id.count()) ) | ||||
124. Specimen.container.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
126. Specimen.container.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
128. Specimen.container.modifierExtension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. | ||||
Short | Extensions that cannot be ignored | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Is Modifier | true because No Modifier Reason provideed in previous versions of FHIR | ||||
Summary | true | ||||
Alternate Names | extensions, user content, modifiers | ||||
130. Specimen.container.identifier | |||||
Definition | The specimen number extension is used when the collected material is distributed from the original tube or container across multiple tubes. In combination with the specimen Id the extension yield a unique identification of the tube or container | ||||
Short | SpecimenNumberExtension | ||||
Note | This is a business identifier, not a resource identifier (see discussion) | ||||
Control | 0..* | ||||
Type | Identifier | ||||
Summary | true | ||||
Alternate Names | Monstervolgnummer | ||||
132. Specimen.container.description | |||||
Definition | Textual description of the container. | ||||
Short | Textual description of the container | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
134. Specimen.container.type | |||||
Definition | Container type describes the envelope in which the material is collected or sent. Examples include blood tubes, transport container, possibly including culture medium. | ||||
Short | ContainerType | ||||
Control | 0..1 | ||||
Binding | Unless not suitable, these codes SHALL be taken from ContainerTypeCodelijst (extensible to http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.13.1.9--20171231000000 )ContainerTypeCodelist | ||||
Type | CodeableConcept | ||||
Alternate Names | Containertype | ||||
136. Specimen.container.capacity | |||||
Definition | The capacity (volume or other measure) the container may contain. | ||||
Short | Container volume or size | ||||
Control | 0..1 | ||||
Type | Quantity(SimpleQuantity) | ||||
138. Specimen.container.specimenQuantity | |||||
Definition | The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type. | ||||
Short | Quantity of specimen within container | ||||
Control | 0..1 | ||||
Type | Quantity(SimpleQuantity) | ||||
140. Specimen.container.additive[x] | |||||
Definition | Introduced substance to preserve, maintain or enhance the specimen. Examples: Formalin, Citrate, EDTA. | ||||
Short | Additive associated with container | ||||
Control | 0..1 | ||||
Binding | For example codes, see v2 Additive/Preservative (example to http://hl7.org/fhir/ValueSet/v2-0371 )Substance added to specimen container | ||||
Type | Choice of: CodeableConcept, Reference(Substance) | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
142. Specimen.note | |||||
Definition | To communicate any details or issues about the specimen or during the specimen collection. (for example: broken vial, sent with patient, frozen). | ||||
Short | Comment | ||||
Control | 0..* | ||||
Type | Annotation | ||||
Alternate Names | Toelichting | ||||
144. Specimen.note.id | |||||
Definition | unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. | ||||
Short | xml:id (or equivalent in JSON) | ||||
Control | 0..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
XML Format | In the XML format, this property is represented as an attribute. | ||||
146. Specimen.note.extension | |||||
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. | ||||
Short | Additional Content defined by implementations | ||||
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. | ||||
Control | 0..* | ||||
Type | Extension | ||||
Alternate Names | extensions, user content | ||||
Slicing | This element introduces a set of slices on Specimen.note.extension . The slices areUnordered and Open, and can be differentiated using the following discriminators: | ||||
148. Specimen.note.author[x] | |||||
Definition | The individual responsible for making the annotation. | ||||
Short | Individual responsible for the annotation | ||||
Control | 0..1 | ||||
Type | Choice of: Reference(Practitioner, Patient, RelatedPerson), string | ||||
[x] Note | SeeChoice of Data Typesfor further information about how to use [x] | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
150. Specimen.note.time | |||||
Definition | Indicates when this particular annotation was made. | ||||
Short | When the annotation was made | ||||
Control | 0..1 | ||||
Type | dateTime | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Summary | true | ||||
152. Specimen.note.text | |||||
Definition | The text of the annotation. | ||||
Short | The annotation - text content | ||||
Control | 1..1 | ||||
Type | string | ||||
Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
Must Support | true |