Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build International flag

Molecular Definition Implementation Guide for Molecular Data Types, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/molecular-definition-data-types/ and changes regularly. See the Directory of published versions

: Amino Acid 1-letter Ambiguous Symbols - XML Representation

Page standards status: Draft Maturity Level: 0

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<ValueSet xmlns="http://hl7.org/fhir">
  <id value="amino-acid-1letter-ambiguous"/>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet amino-acid-1letter-ambiguous</b></p><a name="amino-acid-1letter-ambiguous"> </a><a name="hcamino-acid-1letter-ambiguous"> </a><ul><li>Include these codes as defined in <a href="CodeSystem-amino-acid.html"><code>http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/amino-acid</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-A">A</a></td><td style="color: #cccccc">Alanine</td><td>A</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-B">B</a></td><td style="color: #cccccc">Aspartic acid or asparagine</td><td>D or N</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-C">C</a></td><td style="color: #cccccc">Cysteine</td><td>C</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-D">D</a></td><td style="color: #cccccc">Aspartic acid</td><td>D</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-E">E</a></td><td style="color: #cccccc">Glutamic acid</td><td>E</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-F">F</a></td><td style="color: #cccccc">Phenylalanine</td><td>F</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-G">G</a></td><td style="color: #cccccc">Glycine</td><td>G</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-H">H</a></td><td style="color: #cccccc">Histidine</td><td>H</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-I">I</a></td><td style="color: #cccccc">Isoleucine</td><td>I</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-K">K</a></td><td style="color: #cccccc">Lysine</td><td>K</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-L">L</a></td><td style="color: #cccccc">Leucine</td><td>L</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-M">M</a></td><td style="color: #cccccc">Methionine</td><td>M</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-N">N</a></td><td style="color: #cccccc">Asparagine</td><td>N</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-P">P</a></td><td style="color: #cccccc">Proline</td><td>P</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Q">Q</a></td><td style="color: #cccccc">Glutamine</td><td>Q</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-R">R</a></td><td style="color: #cccccc">Arginine</td><td>R</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-S">S</a></td><td style="color: #cccccc">Serine</td><td>S</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-T">T</a></td><td style="color: #cccccc">Threonine</td><td>T</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-U">U</a></td><td style="color: #cccccc">Selenocysteine</td><td>U</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-V">V</a></td><td style="color: #cccccc">Valine</td><td>V</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-W">W</a></td><td style="color: #cccccc">Tryptophan</td><td>W</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-X">X</a></td><td style="color: #cccccc">Unknown or other amino acid</td><td>Any amino acid</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Y">Y</a></td><td style="color: #cccccc">Tyrosine</td><td>Y</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Z">Z</a></td><td style="color: #cccccc">Glutamic acid or glutamine</td><td>E or Q</td></tr></table></li></ul></div>
  </text>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg">
    <valueCode value="cg"/>
  </extension>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm">
    <valueInteger value="0">
      <extension
                 url="http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom">
        <valueCanonical
                        value="http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"/>
      </extension>
    </valueInteger>
  </extension>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status">
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      <extension
                 url="http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom">
        <valueCanonical
                        value="http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"/>
      </extension>
    </valueCode>
  </extension>
  <url
       value="http://hl7.org/fhir/uv/molecular-definition-data-types/ValueSet/amino-acid-1letter-ambiguous"/>
  <version value="1.0.0-ballot1"/>
  <name value="AminoAcid1LetterAmbiguous"/>
  <title value="Amino Acid 1-letter Ambiguous Symbols"/>
  <status value="draft"/>
  <experimental value="false"/>
  <date value="2025-09-05T20:30:49+00:00"/>
  <publisher value="HL7 International / Clinical Genomics"/>
  <contact>
    <name value="HL7 International / Clinical Genomics"/>
    <telecom>
      <system value="url"/>
      <value value="http://www.hl7.org/Special/committees/clingenomics"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="cg@lists.HL7.org"/>
    </telecom>
  </contact>
  <description
               value="Single-letter symbols for amino acids, including ambiguous symbols."/>
  <jurisdiction>
    <coding>
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
      <code value="001"/>
      <display value="World"/>
    </coding>
  </jurisdiction>
  <compose>
    <include>
      <system
              value="http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/amino-acid"/>
      <concept>
        <code value="A"/>
      </concept>
      <concept>
        <code value="B"/>
      </concept>
      <concept>
        <code value="C"/>
      </concept>
      <concept>
        <code value="D"/>
      </concept>
      <concept>
        <code value="E"/>
      </concept>
      <concept>
        <code value="F"/>
      </concept>
      <concept>
        <code value="G"/>
      </concept>
      <concept>
        <code value="H"/>
      </concept>
      <concept>
        <code value="I"/>
      </concept>
      <concept>
        <code value="K"/>
      </concept>
      <concept>
        <code value="L"/>
      </concept>
      <concept>
        <code value="M"/>
      </concept>
      <concept>
        <code value="N"/>
      </concept>
      <concept>
        <code value="P"/>
      </concept>
      <concept>
        <code value="Q"/>
      </concept>
      <concept>
        <code value="R"/>
      </concept>
      <concept>
        <code value="S"/>
      </concept>
      <concept>
        <code value="T"/>
      </concept>
      <concept>
        <code value="U"/>
      </concept>
      <concept>
        <code value="V"/>
      </concept>
      <concept>
        <code value="W"/>
      </concept>
      <concept>
        <code value="X"/>
      </concept>
      <concept>
        <code value="Y"/>
      </concept>
      <concept>
        <code value="Z"/>
      </concept>
    </include>
  </compose>
</ValueSet>