Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build
Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build
Molecular Definition Implementation Guide for Molecular Data Types, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/molecular-definition-data-types/ and changes regularly. See the Directory of published versions
| Page standards status: Draft | Maturity Level: 0 |
{
"resourceType" : "ValueSet",
"id" : "amino-acid-1letter-ambiguous",
"text" : {
"status" : "extensions",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet amino-acid-1letter-ambiguous</b></p><a name=\"amino-acid-1letter-ambiguous\"> </a><a name=\"hcamino-acid-1letter-ambiguous\"> </a><ul><li>Include these codes as defined in <a href=\"CodeSystem-amino-acid.html\"><code>http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/amino-acid</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-A\">A</a></td><td style=\"color: #cccccc\">Alanine</td><td>A</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-B\">B</a></td><td style=\"color: #cccccc\">Aspartic acid or asparagine</td><td>D or N</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-C\">C</a></td><td style=\"color: #cccccc\">Cysteine</td><td>C</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-D\">D</a></td><td style=\"color: #cccccc\">Aspartic acid</td><td>D</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-E\">E</a></td><td style=\"color: #cccccc\">Glutamic acid</td><td>E</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-F\">F</a></td><td style=\"color: #cccccc\">Phenylalanine</td><td>F</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-G\">G</a></td><td style=\"color: #cccccc\">Glycine</td><td>G</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-H\">H</a></td><td style=\"color: #cccccc\">Histidine</td><td>H</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-I\">I</a></td><td style=\"color: #cccccc\">Isoleucine</td><td>I</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-K\">K</a></td><td style=\"color: #cccccc\">Lysine</td><td>K</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-L\">L</a></td><td style=\"color: #cccccc\">Leucine</td><td>L</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-M\">M</a></td><td style=\"color: #cccccc\">Methionine</td><td>M</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-N\">N</a></td><td style=\"color: #cccccc\">Asparagine</td><td>N</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-P\">P</a></td><td style=\"color: #cccccc\">Proline</td><td>P</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Q\">Q</a></td><td style=\"color: #cccccc\">Glutamine</td><td>Q</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-R\">R</a></td><td style=\"color: #cccccc\">Arginine</td><td>R</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-S\">S</a></td><td style=\"color: #cccccc\">Serine</td><td>S</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-T\">T</a></td><td style=\"color: #cccccc\">Threonine</td><td>T</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-U\">U</a></td><td style=\"color: #cccccc\">Selenocysteine</td><td>U</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-V\">V</a></td><td style=\"color: #cccccc\">Valine</td><td>V</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-W\">W</a></td><td style=\"color: #cccccc\">Tryptophan</td><td>W</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-X\">X</a></td><td style=\"color: #cccccc\">Unknown or other amino acid</td><td>Any amino acid</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Y\">Y</a></td><td style=\"color: #cccccc\">Tyrosine</td><td>Y</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Z\">Z</a></td><td style=\"color: #cccccc\">Glutamic acid or glutamine</td><td>E or Q</td></tr></table></li></ul></div>"
},
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode" : "cg"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
"valueInteger" : 0,
"_valueInteger" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical" : "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
}
]
}
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "draft",
"_valueCode" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical" : "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
}
]
}
}
],
"url" : "http://hl7.org/fhir/uv/molecular-definition-data-types/ValueSet/amino-acid-1letter-ambiguous",
"version" : "1.0.0-ballot1",
"name" : "AminoAcid1LetterAmbiguous",
"title" : "Amino Acid 1-letter Ambiguous Symbols",
"status" : "draft",
"experimental" : false,
"date" : "2025-09-05T20:30:49+00:00",
"publisher" : "HL7 International / Clinical Genomics",
"contact" : [
{
"name" : "HL7 International / Clinical Genomics",
"telecom" : [
{
"system" : "url",
"value" : "http://www.hl7.org/Special/committees/clingenomics"
},
{
"system" : "email",
"value" : "cg@lists.HL7.org"
}
]
}
],
"description" : "Single-letter symbols for amino acids, including ambiguous symbols.",
"jurisdiction" : [
{
"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001",
"display" : "World"
}
]
}
],
"compose" : {
"include" : [
{
"system" : "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/amino-acid",
"concept" : [
{
"code" : "A"
},
{
"code" : "B"
},
{
"code" : "C"
},
{
"code" : "D"
},
{
"code" : "E"
},
{
"code" : "F"
},
{
"code" : "G"
},
{
"code" : "H"
},
{
"code" : "I"
},
{
"code" : "K"
},
{
"code" : "L"
},
{
"code" : "M"
},
{
"code" : "N"
},
{
"code" : "P"
},
{
"code" : "Q"
},
{
"code" : "R"
},
{
"code" : "S"
},
{
"code" : "T"
},
{
"code" : "U"
},
{
"code" : "V"
},
{
"code" : "W"
},
{
"code" : "X"
},
{
"code" : "Y"
},
{
"code" : "Z"
}
]
}
]
}
}