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| Responsible Owner: Biomedical Research and Regulation Work Group | Standards Status: Informative |
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Definition for Code SystemSubstanceTargetOrganismExample
<?xml version="1.0" encoding="UTF-8"?> <CodeSystem xmlns="http://hl7.org/fhir"> <id value="substance-target-organism"/> <meta> <lastUpdated value="2026-06-23T16:20:19.822+00:00"/> </meta> <text> <status value="generated"/> <div xmlns="http://www.w3.org/1999/xhtml"> <p class="res-header-id"> <b> Generated Narrative: CodeSystem substance-target-organism</b> </p> <a name="substance-target-organism"> </a> <a name="hcsubstance-target-organism"> </a> <p> This case-sensitive code system <code> http://hl7.org/fhir/substance-target-organism</code> defines the following codes: </p> <table class="codes"> <tr> <td style="white-space:nowrap"> <b> Code</b> </td> <td> <b> Display</b> </td> <td> <b> Definition</b> </td> </tr> <tr> <td style="white-space:nowrap">e-coli <a name="substance-target-organism-e-coli"> </a> </td> <td> Escherichia coli</td> <td> Escherichia coli.</td> </tr> <tr> <td style="white-space:nowrap">s-aureus <a name="substance-target-organism-s-aureus"> </a> </td> <td> Staphylococcus aureus</td> <td> Staphylococcus aureus.</td> </tr> <tr> <td style="white-space:nowrap">m-tuberculosis <a name="substance-target-organism-m-tuberculosis"> </a> </td> <td> Mycobacterium tuberculosis</td> <td> Mycobacterium tuberculosis.</td> </tr> <tr> <td style="white-space:nowrap">p-aeruginosa <a name="substance-target-organism-p-aeruginosa"> </a> </td> <td> Pseudomonas aeruginosa</td> <td> Pseudomonas aeruginosa.</td> </tr> <tr> <td style="white-space:nowrap">candida-albicans <a name="substance-target-organism-candida-albicans"> </a> </td> <td> Candida albicans</td> <td> Candida albicans.</td> </tr> <tr> <td style="white-space:nowrap">hiv <a name="substance-target-organism-hiv"> </a> </td> <td> HIV</td> <td> Human Immunodeficiency Virus.</td> </tr> <tr> <td style="white-space:nowrap">hbv <a name="substance-target-organism-hbv"> </a> </td> <td> HBV</td> <td> Hepatitis B Virus.</td> </tr> <tr> <td style="white-space:nowrap">hcv <a name="substance-target-organism-hcv"> </a> </td> <td> HCV</td> <td> Hepatitis C Virus.</td> </tr> <tr> <td style="white-space:nowrap">sars-cov-2 <a name="substance-target-organism-sars-cov-2"> </a> </td> <td> SARS-CoV-2</td> <td> Severe Acute Respiratory Syndrome Coronavirus 2.</td> </tr> <tr> <td style="white-space:nowrap">p-falciparum <a name="substance-target-organism-p-falciparum"> </a> </td> <td> Plasmodium falciparum</td> <td> Plasmodium falciparum.</td> </tr> </table> </div> </text> <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg"> <valueCode value="brr"/> </extension> <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status"> <valueCode value="informative"/> </extension> <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm"> <valueInteger value="1"/> </extension> <url value="http://hl7.org/fhir/substance-target-organism"/> <version value="6.0.0-ballot4"/> <name value="SubstanceTargetOrganismExample"/> <title value="Substance Target Organism"/> <status value="active"/> <experimental value="true"/> <date value="2026-06-23"/> <publisher value="HL7 (FHIR Project)"/> <contact> <telecom> <system value="url"/> <value value="http://hl7.org/fhir"/> </telecom> <telecom> <system value="email"/> <value value="fhir@lists.hl7.org"/> </telecom> </contact> <description value="The specific organism that an anti-infective substance is targeted against."/> <jurisdiction> <coding> <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/> <code value="001"/> <display value="World"/> </coding> </jurisdiction> <caseSensitive value="true"/> <valueSet value="http://hl7.org/fhir/ValueSet/substance-target-organism"/> <content value="complete"/> <concept> <code value="e-coli"/> <display value="Escherichia coli"/> <definition value="Escherichia coli."/> </concept> <concept> <code value="s-aureus"/> <display value="Staphylococcus aureus"/> <definition value="Staphylococcus aureus."/> </concept> <concept> <code value="m-tuberculosis"/> <display value="Mycobacterium tuberculosis"/> <definition value="Mycobacterium tuberculosis."/> </concept> <concept> <code value="p-aeruginosa"/> <display value="Pseudomonas aeruginosa"/> <definition value="Pseudomonas aeruginosa."/> </concept> <concept> <code value="candida-albicans"/> <display value="Candida albicans"/> <definition value="Candida albicans."/> </concept> <concept> <code value="hiv"/> <display value="HIV"/> <definition value="Human Immunodeficiency Virus."/> </concept> <concept> <code value="hbv"/> <display value="HBV"/> <definition value="Hepatitis B Virus."/> </concept> <concept> <code value="hcv"/> <display value="HCV"/> <definition value="Hepatitis C Virus."/> </concept> <concept> <code value="sars-cov-2"/> <display value="SARS-CoV-2"/> <definition value="Severe Acute Respiratory Syndrome Coronavirus 2."/> </concept> <concept> <code value="p-falciparum"/> <display value="Plasmodium falciparum"/> <definition value="Plasmodium falciparum."/> </concept> </CodeSystem>
Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.
FHIR ®© HL7.org 2011+. FHIR R6 hl7.fhir.r6.core#6.0.0-ballot4 generated on Tue, Jun 23, 2026 16:22+0000.
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