Genomics Reporting Implementation Guide
4.0.0-ballot - STU 4 ballot International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 4.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

Resource Profile: GenomicReport - Detailed Descriptions

Page standards status: Trial-use Maturity Level: 2

Definitions for the genomic-report resource profile.

Guidance on how to interpret the contents of this table can be foundhere

0. DiagnosticReport
Definition

The findings and interpretation of diagnostic tests performed on patients, groups of patients, products, substances, devices, and locations, and/or specimens derived from these. The report includes clinical context such as requesting provider information, and some mix of atomic results, images, textual and coded interpretations, and formatted representation of diagnostic reports. The report also includes non-clinical context such as batch analysis and stability reporting of products and substances.

ShortA Diagnostic report - a combination of request information, atomic results, images, interpretation, as well as formatted reports
Comments

This is intended to capture a single report and is not suitable for use in displaying summary information that covers multiple reports. For example, this resource has not been designed for laboratory cumulative reporting formats nor detailed structured reports for sequencing.

Control0..*
Is Modifierfalse
Must Supportfalse
Summaryfalse
Alternate NamesReport, Test, Result, Results, Labs, Laboratory
Invariantsdgr-1: When a Composition is referenced in `DiagnosticReport.composition`, all Observation resources referenced in `Composition.entry` must also be referenced in `DiagnosticReport.result` or in the `Observation.hasMember` references. (composition.exists() implies (composition.resolve().section.entry.reference.where(resolve() is Observation) in (result.reference|result.reference.resolve().hasMember.reference)))
dom-2: If the resource is contained in another resource, it SHALL NOT contain nested Resources (contained.contained.empty())
dom-3: If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource (contained.where((('#'+id.trace('id') in %resource.descendants().select(reference | as(uri))) or descendants().where(reference='#' | as(uri)='#').exists()).not()).trace('unmatched', id).empty())
dom-4: If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated (contained.meta.versionId.empty() and contained.meta.lastUpdated.empty())
dom-5: If a resource is contained in another resource, it SHALL NOT have a security label (contained.meta.security.empty())
dom-6: A resource should have narrative for robust management (text.`div`.exists())
2. DiagnosticReport.implicitRules
Definition

A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.

ShortA set of rules under which this content was created
Comments

Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of its narrative along with other profiles, value sets, etc.

Control0..1
Typeuri
Is Modifiertrue because This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies its meaning or interpretation
Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
Must Supportfalse
Summarytrue
Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
4. DiagnosticReport.contained
Definition

These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, nor can they have their own independent transaction scope. This is allowed to be a Parameters resource if and only if it is referenced by a resource that provides context/meaning.

ShortContained, inline Resources
Comments

This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags in their meta elements, but SHALL NOT have security labels. Contained resources may be a resource type defined in the FHIR specification, or an additional resource.

Control0..*
This element is affected by the following invariants: dom-2, dom-4, dom-3, dom-5
TypeResource
Is Modifierfalse
Must Supportfalse
Summaryfalse
Alternate Namesinline resources, anonymous resources, contained resources
6. DiagnosticReport.extension
Definition

An Extension


May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

ShortExtensionAdditional content defined by implementations
Comments

There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

Control0..*
TypeExtension
Is Modifierfalse
Must Supportfalse
Summaryfalse
Alternate Namesextensions, user content
Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
SlicingThis element introduces a set of slices on DiagnosticReport.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
  • value @ url
  • 8. DiagnosticReport.extension:recommended-action
    Slice Namerecommended-action
    Definition

    References a proposed action that is recommended based on the results of the diagnostic report.

    ShortRecommended Action
    Control0..*
    TypeExtension(Recommended Action) (Extension Type: Reference(Medication Recommendation, Followup Recommendation))
    Is Modifierfalse
    Must Supportfalse
    Summaryfalse
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    10. DiagnosticReport.extension:genomic-risk-assessment
    Slice Namegenomic-risk-assessment
    Definition

    RiskAssessment delivered as part of a genomics report or observation

    ShortGenomic Risk Assessment
    Control0..*
    TypeExtension(Genomic Risk Assessment) (Extension Type: Reference(RiskAssessment))
    Is Modifierfalse
    Must Supportfalse
    Summaryfalse
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    12. DiagnosticReport.extension:coded-note
    Slice Namecoded-note
    Definition

    Adds codified notes to a report to capture additional content

    ShortComments about the report that also contain a coded type
    Comments

    May include general statements about the report, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation. The CodedAnnotation data type, while not allowing for or intending to make the content computable, does allow the author to indicate the type of note. This does not replace the use of results or conclusion or conclusionCode. One important note is that Annotation is a FHIR data type, this is NOT about annotations in the genomic context.

    Control0..*
    TypeExtension(Genomic Report Note) (Extension Type: Annotation(Coded Annotation))
    Is Modifierfalse
    Must Supportfalse
    Summaryfalse
    Requirements

    Need to be able to provide free text additional information. Notes SHALL NOT contain information which can be captured in a structured way.

    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    14. DiagnosticReport.extension:supporting-info
    Slice Namesupporting-info
    Definition

    Other resources from the patient record that may be relevant to the event. The information from these resources was either used to create the instance or is provided to help with its interpretation. This extension should not be used if more specific inline elements or extensions are available. For example, use Observation.hasMember instead of supportingInformation for representing the members of an Observation panel.

    ShortOther information that may be relevant to this event.
    Control0..*
    TypeExtension(Supporting info) (Extension Type: Reference(Resource))
    Is Modifierfalse
    Must Supportfalse
    Summaryfalse
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    16. DiagnosticReport.extension:hla-genotyping-results-allele-database
    Slice Namehla-genotyping-results-allele-database
    Definition

    Allele Database.

    ShortAllele Database
    Control0..1
    TypeExtension(Allele Database) (Extension Type: CodeableConcept)
    Is Modifierfalse
    Must Supportfalse
    Summaryfalse
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    18. DiagnosticReport.extension:hla-genotyping-results-glstring
    Slice Namehla-genotyping-results-glstring
    Definition

    glstring.

    Shortglstring
    Control0..1
    TypeExtension(GLString) (Complex Extension)
    Is Modifierfalse
    Must Supportfalse
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    20. DiagnosticReport.extension:workflow-relatedArtifact
    Slice Nameworkflow-relatedArtifact
    Definition

    Documents the 'knowledge artifacts' relevant to the base resource such as citations, supporting evidence, documentation of processes, caveats around testing methodology.

    ShortDocumentation relevant to the 'parent' resource
    Comments

    Note that in contrast this extension, the supportingInfo extension references other resources from the patient record that were used in creating the resource.

    Control0..*
    TypeExtension(Related artifact) (Extension Type: RelatedArtifact)
    Is Modifierfalse
    Must Supportfalse
    Summaryfalse
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    22. DiagnosticReport.modifierExtension
    Definition

    May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.

    Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).

    ShortExtensions that cannot be ignored
    Comments

    There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

    Control0..*
    TypeExtension
    Is Modifiertrue because Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them
    Must Supportfalse
    Summarytrue
    Requirements

    Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions.

    Alternate Namesextensions, user content
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    24. DiagnosticReport.status
    Definition

    The status of the diagnostic report.

    Shortregistered | partial | preliminary | modified | final | amended | corrected | appended | cancelled | entered-in-error | unknown
    Control1..1
    BindingThe codes SHALL be taken from DiagnosticReportStatushttp://hl7.org/fhir/ValueSet/diagnostic-report-status|6.0.0-ballot3
    (required to http://hl7.org/fhir/ValueSet/diagnostic-report-status|6.0.0-ballot3)

    The status of the diagnostic report.

    Typecode
    Is Modifiertrue because This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    Must Supportfalse
    Summarytrue
    Requirements

    Diagnostic services routinely issue provisional/incomplete reports, and sometimes withdraw previously released reports.

    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    26. DiagnosticReport.category
    Definition

    A code that classifies the clinical discipline, department or diagnostic service that created the report (e.g. cardiology, biochemistry, hematology, MRI). This is used for searching, sorting and display purposes.

    ShortService category
    Comments

    Multiple categories are allowed using various categorization schemes. The level of granularity is defined by the category concepts in the value set. More fine-grained filtering can be performed using the metadata and/or terminology hierarchy in DiagnosticReport.code.

    Control10..*
    BindingFor example codes, see DiagnosticServiceSectionCodeshttp://hl7.org/fhir/ValueSet/diagnostic-service-sections|6.0.0-ballot3
    (example to http://hl7.org/fhir/ValueSet/diagnostic-service-sections|6.0.0-ballot3)

    HL7 V2 table 0074

    TypeCodeableConcept
    Is Modifierfalse
    Must Supportfalse
    Summarytrue
    Alternate NamesDepartment, Sub-department, Service, Discipline
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    SlicingThis element introduces a set of slices on DiagnosticReport.category. The slices areUnordered and Open, and can be differentiated using the following discriminators:
    • value @ coding
    • 28. DiagnosticReport.category:Genetics
      Slice NameGenetics
      Definition

      A code that classifies the clinical discipline, department or diagnostic service that created the report (e.g. cardiology, biochemistry, hematology, MRI). This is used for searching, sorting and display purposes.

      ShortService category
      Comments

      Multiple categories are allowed using various categorization schemes. The level of granularity is defined by the category concepts in the value set. More fine-grained filtering can be performed using the metadata and/or terminology hierarchy in DiagnosticReport.code.

      Control10..1*
      BindingFor example codes, see DiagnosticServiceSectionCodeshttp://hl7.org/fhir/ValueSet/diagnostic-service-sections|6.0.0-ballot3
      (example to http://hl7.org/fhir/ValueSet/diagnostic-service-sections|6.0.0-ballot3)

      HL7 V2 table 0074

      TypeCodeableConcept
      Is Modifierfalse
      Must Supportfalse
      Summarytrue
      Alternate NamesDepartment, Sub-department, Service, Discipline
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      30. DiagnosticReport.category:Genetics.coding
      Definition

      A reference to a code defined by a terminology system.

      ShortCode defined by a terminology system
      Comments

      Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.

      Control10..1*
      TypeCoding
      Is Modifierfalse
      Summaryfalse
      Requirements

      Allows for alternative encodings within a code system, and translations to other code systems.

      Pattern Value{
        "system" : "http://terminology.hl7.org/CodeSystem/v2-0074",
        "code" : "GE"
      }
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      32. DiagnosticReport.code
      Definition

      A code or name that describes this diagnostic report.

      ShortName/Code for this diagnostic report
      Comments

      DiagnosticReport.code is primarily meant to characterize the nature of the entire report, not to summarize the content in detail. In the case where multiple orderables are included in a single report, then the single DiagnosticReport.code would represent the entire 'panel' that the report is covering.

      Control1..1
      BindingThe codes SHOULD be taken from LOINCDiagnosticReportCodeshttp://hl7.org/fhir/ValueSet/report-codes|6.0.0-ballot3
      (preferred to http://hl7.org/fhir/ValueSet/report-codes|6.0.0-ballot3)

      LOINC Codes for Diagnostic Reports

      TypeCodeableConcept
      Is Modifierfalse
      Must Supportfalse
      Summarytrue
      Alternate NamesType
      Pattern Value{
        "coding" : [{
          "system" : "http://loinc.org",
          "code" : "51969-4"
        }]
      }
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      34. DiagnosticReport.effective[x]
      Definition

      The time or time-period the observed values are related to. When the subject of the report is a patient, this is usually either the time of the procedure or of specimen collection(s), but very often the source of the date/time is not known, only the date/time itself.

      ShortClinically relevant time/time-period for the results that are included in the report
      Comments

      If the diagnostic procedure was performed on the patient, this is the time it was performed. If there are specimens, the diagnostically relevant time can be derived from the specimen collection times, but the specimen information is not always available, and the exact relationship between the specimens and the diagnostically relevant time is not always automatic.

      Control0..1
      TypedateTime, Period
      [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
      Is Modifierfalse
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Must Supportfalse
      Summarytrue
      Requirements

      Need to know where in the patient history to file/present this report.

      Alternate NamesObservation time, Effective Time, Occurrence
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      36. DiagnosticReport.result
      Definition

      Observations that are part of this diagnostic report.

      ShortObservations
      Comments

      Observations can contain observations.

      Control0..*
      This element is affected by the following invariants: dgr-1
      TypeReference(Observation)
      Is Modifierfalse
      Must Supportfalse
      Summaryfalse
      Requirements

      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      SlicingThis element introduces a set of slices on DiagnosticReport.result. The slices areUnordered and Open, and can be differentiated using the following discriminators:
      • profile @ resolve()
      • 38. DiagnosticReport.result:diagnostic-implication
        Slice Namediagnostic-implication
        Definition

        Observations that are part of this diagnostic report.

        ShortDiagnostic ImplicationObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Diagnostic Implication, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        40. DiagnosticReport.result:therapeutic-implication
        Slice Nametherapeutic-implication
        Definition

        Observations that are part of this diagnostic report.

        ShortTherapeutic ImplicationObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Therapeutic Implication, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        42. DiagnosticReport.result:molecular-consequence
        Slice Namemolecular-consequence
        Definition

        Observations that are part of this diagnostic report.

        ShortMolecular ConsequenceObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Molecular Consequence, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        44. DiagnosticReport.result:variant
        Slice Namevariant
        Definition

        Observations that are part of this diagnostic report.

        ShortVariantObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Variant, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        46. DiagnosticReport.result:sequence-phase-relation
        Slice Namesequence-phase-relation
        Definition

        Observations that are part of this diagnostic report.

        ShortSequence Phase RelationshipObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Sequence Phase Relationship, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        48. DiagnosticReport.result:genotype
        Slice Namegenotype
        Definition

        Observations that are part of this diagnostic report.

        ShortGenotypeObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Genotype, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        50. DiagnosticReport.result:haplotype
        Slice Namehaplotype
        Definition

        Observations that are part of this diagnostic report.

        ShortHaplotypeObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Haplotype, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        52. DiagnosticReport.result:biomarker
        Slice Namebiomarker
        Definition

        Observations that are part of this diagnostic report.

        ShortMolecularBiomarkerObservations
        Comments

        Observations can contain observations.

        Control0..*
        This element is affected by the following invariants: dgr-1
        TypeReference(Molecular Biomarker, Observation)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

        Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        54. DiagnosticReport.conclusion
        Definition

        Concise and clinically contextualized summary conclusion (interpretation/impression) of the diagnostic report.

        ShortAssessment of overall resultsClinical conclusion (interpretation) of test results
        Control0..1
        Typemarkdown
        Is Modifierfalse
        Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
        Must Supportfalse
        Summaryfalse
        Requirements

        Need to be able to provide a conclusion that is not lost among the basic result data.

        Alternate NamesReport
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        56. DiagnosticReport.conclusionCode
        Definition

        One or more codes and/or references that represent the summary conclusion (interpretation/impression) of the diagnostic report.

        ShortCoarse overall interpretation of the genomic resultsCodes and/or references for the clinical conclusion of test results
        Control0..*
        BindingFor example codes, see SNOMEDCTClinicalFindingshttp://hl7.org/fhir/ValueSet/clinical-findings|6.0.0-ballot3
        (example to http://hl7.org/fhir/ValueSet/clinical-findings|6.0.0-ballot3)

        SNOMED CT Clinical Findings

        TypeCodeableReference(Observation, Condition)
        Is Modifierfalse
        Must Supportfalse
        Summaryfalse
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))

        Guidance on how to interpret the contents of this table can be foundhere

        0. DiagnosticReport
        2. DiagnosticReport.extension
        SlicingThis element introduces a set of slices on DiagnosticReport.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
        • value @ url
        • 4. DiagnosticReport.extension:recommended-action
          Slice Namerecommended-action
          Control0..*
          TypeExtension(Recommended Action) (Extension Type: Reference(Medication Recommendation, Followup Recommendation))
          6. DiagnosticReport.extension:genomic-risk-assessment
          Slice Namegenomic-risk-assessment
          Control0..*
          TypeExtension(Genomic Risk Assessment) (Extension Type: Reference(RiskAssessment))
          8. DiagnosticReport.extension:coded-note
          Slice Namecoded-note
          ShortComments about the report that also contain a coded type
          Comments

          May include general statements about the report, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation. The CodedAnnotation data type, while not allowing for or intending to make the content computable, does allow the author to indicate the type of note. This does not replace the use of results or conclusion or conclusionCode. One important note is that Annotation is a FHIR data type, this is NOT about annotations in the genomic context.

          Control0..*
          TypeExtension(Genomic Report Note) (Extension Type: Annotation(Coded Annotation))
          Requirements

          Need to be able to provide free text additional information. Notes SHALL NOT contain information which can be captured in a structured way.

          10. DiagnosticReport.extension:supporting-info
          Slice Namesupporting-info
          Control0..*
          TypeExtension(Supporting info) (Extension Type: Reference(Resource))
          12. DiagnosticReport.extension:hla-genotyping-results-allele-database
          Slice Namehla-genotyping-results-allele-database
          Control0..1
          TypeExtension(Allele Database) (Extension Type: CodeableConcept)
          14. DiagnosticReport.extension:hla-genotyping-results-glstring
          Slice Namehla-genotyping-results-glstring
          Control0..1
          TypeExtension(GLString) (Complex Extension)
          16. DiagnosticReport.extension:workflow-relatedArtifact
          Slice Nameworkflow-relatedArtifact
          Comments

          Note that in contrast this extension, the supportingInfo extension references other resources from the patient record that were used in creating the resource.

          Control0..*
          TypeExtension(Related artifact) (Extension Type: RelatedArtifact)
          18. DiagnosticReport.category
          Control1..?
          SlicingThis element introduces a set of slices on DiagnosticReport.category. The slices areUnordered and Open, and can be differentiated using the following discriminators:
          • value @ coding
          • 20. DiagnosticReport.category:Genetics
            Slice NameGenetics
            Control1..1
            22. DiagnosticReport.category:Genetics.coding
            Control1..1
            Pattern Value{
              "system" : "http://terminology.hl7.org/CodeSystem/v2-0074",
              "code" : "GE"
            }
            24. DiagnosticReport.code
            Pattern Value{
              "coding" : [{
                "system" : "http://loinc.org",
                "code" : "51969-4"
              }]
            }
            26. DiagnosticReport.effective[x]
            TypedateTime, Period
            [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
            Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
            28. DiagnosticReport.result
            SlicingThis element introduces a set of slices on DiagnosticReport.result. The slices areUnordered and Open, and can be differentiated using the following discriminators:
            • profile @ resolve()
            • 30. DiagnosticReport.result:diagnostic-implication
              Slice Namediagnostic-implication
              ShortDiagnostic Implication
              Control0..*
              TypeReference(Diagnostic Implication)
              32. DiagnosticReport.result:therapeutic-implication
              Slice Nametherapeutic-implication
              ShortTherapeutic Implication
              Control0..*
              TypeReference(Therapeutic Implication)
              34. DiagnosticReport.result:molecular-consequence
              Slice Namemolecular-consequence
              ShortMolecular Consequence
              Control0..*
              TypeReference(Molecular Consequence)
              36. DiagnosticReport.result:variant
              Slice Namevariant
              ShortVariant
              Control0..*
              TypeReference(Variant)
              38. DiagnosticReport.result:sequence-phase-relation
              Slice Namesequence-phase-relation
              ShortSequence Phase Relationship
              Control0..*
              TypeReference(Sequence Phase Relationship)
              40. DiagnosticReport.result:genotype
              Slice Namegenotype
              ShortGenotype
              Control0..*
              TypeReference(Genotype)
              42. DiagnosticReport.result:haplotype
              Slice Namehaplotype
              ShortHaplotype
              Control0..*
              TypeReference(Haplotype)
              44. DiagnosticReport.result:biomarker
              Slice Namebiomarker
              ShortMolecularBiomarker
              Control0..*
              TypeReference(Molecular Biomarker)
              46. DiagnosticReport.conclusion
              ShortAssessment of overall results
              48. DiagnosticReport.conclusionCode
              ShortCoarse overall interpretation of the genomic results

              Guidance on how to interpret the contents of this table can be foundhere

              0. DiagnosticReport
              Definition

              The findings and interpretation of diagnostic tests performed on patients, groups of patients, products, substances, devices, and locations, and/or specimens derived from these. The report includes clinical context such as requesting provider information, and some mix of atomic results, images, textual and coded interpretations, and formatted representation of diagnostic reports. The report also includes non-clinical context such as batch analysis and stability reporting of products and substances.

              ShortA Diagnostic report - a combination of request information, atomic results, images, interpretation, as well as formatted reports
              Comments

              This is intended to capture a single report and is not suitable for use in displaying summary information that covers multiple reports. For example, this resource has not been designed for laboratory cumulative reporting formats nor detailed structured reports for sequencing.

              Control0..*
              Is Modifierfalse
              Must Supportfalse
              Summaryfalse
              Alternate NamesReport, Test, Result, Results, Labs, Laboratory
              Invariantsdgr-1: When a Composition is referenced in `DiagnosticReport.composition`, all Observation resources referenced in `Composition.entry` must also be referenced in `DiagnosticReport.result` or in the `Observation.hasMember` references. (composition.exists() implies (composition.resolve().section.entry.reference.where(resolve() is Observation) in (result.reference|result.reference.resolve().hasMember.reference)))
              dom-2: If the resource is contained in another resource, it SHALL NOT contain nested Resources (contained.contained.empty())
              dom-3: If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource (contained.where((('#'+id.trace('id') in %resource.descendants().select(reference | as(uri))) or descendants().where(reference='#' | as(uri)='#').exists()).not()).trace('unmatched', id).empty())
              dom-4: If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated (contained.meta.versionId.empty() and contained.meta.lastUpdated.empty())
              dom-5: If a resource is contained in another resource, it SHALL NOT have a security label (contained.meta.security.empty())
              dom-6: A resource should have narrative for robust management (text.`div`.exists())
              2. DiagnosticReport.id
              Definition

              The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.

              ShortLogical id of this artifact
              Comments

              Within the context of the FHIR RESTful interactions, the resource has an id except for cases like the create and conditional update. Otherwise, the use of the resouce id depends on the given use case.

              Control0..1
              Typeid
              Is Modifierfalse
              Must Supportfalse
              Summarytrue
              4. DiagnosticReport.meta
              Definition

              The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.

              ShortMetadata about the resource
              Control0..1
              TypeMeta
              Is Modifierfalse
              Must Supportfalse
              Summarytrue
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              6. DiagnosticReport.implicitRules
              Definition

              A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.

              ShortA set of rules under which this content was created
              Comments

              Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element. Often, when used, the URL is a reference to an implementation guide that defines these special rules as part of its narrative along with other profiles, value sets, etc.

              Control0..1
              Typeuri
              Is Modifiertrue because This element is labeled as a modifier because the implicit rules may provide additional knowledge about the resource that modifies its meaning or interpretation
              Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
              Must Supportfalse
              Summarytrue
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              8. DiagnosticReport.language
              Definition

              The base language in which the resource is written.

              ShortLanguage of the resource content
              Comments

              Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource. Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).

              Control0..1
              BindingThe codes SHALL be taken from AllLanguages
              (required to http://hl7.org/fhir/ValueSet/all-languages|6.0.0-ballot3)

              IETF language tag for a human language

              Typecode
              Is Modifierfalse
              Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
              Must Supportfalse
              Summaryfalse
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              10. DiagnosticReport.text
              Definition

              A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it "clinically safe" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.

              ShortText summary of the resource, for human interpretation
              Comments

              Contained resources do not have a narrative. Resources that are not contained SHOULD have a narrative. In some cases, a resource may only have text with little or no additional discrete data (as long as all minOccurs=1 elements are satisfied). This may be necessary for data from legacy systems where information is captured as a "text blob" or where text is additionally entered raw or narrated and encoded information is added later.

              Control0..1
              This element is affected by the following invariants: dom-6
              TypeNarrative
              Is Modifierfalse
              Must Supportfalse
              Summaryfalse
              Alternate Namesnarrative, html, xhtml, display
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              12. DiagnosticReport.contained
              Definition

              These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, nor can they have their own independent transaction scope. This is allowed to be a Parameters resource if and only if it is referenced by a resource that provides context/meaning.

              ShortContained, inline Resources
              Comments

              This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. Contained resources may have profiles and tags in their meta elements, but SHALL NOT have security labels. Contained resources may be a resource type defined in the FHIR specification, or an additional resource.

              Control0..*
              This element is affected by the following invariants: dom-2, dom-4, dom-3, dom-5
              TypeResource
              Is Modifierfalse
              Must Supportfalse
              Summaryfalse
              Alternate Namesinline resources, anonymous resources, contained resources
              14. DiagnosticReport.extension
              Definition

              An Extension

              ShortExtension
              Control0..*
              TypeExtension
              Is Modifierfalse
              Must Supportfalse
              Summaryfalse
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              SlicingThis element introduces a set of slices on DiagnosticReport.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
              • value @ url
              • 16. DiagnosticReport.extension:recommended-action
                Slice Namerecommended-action
                Definition

                References a proposed action that is recommended based on the results of the diagnostic report.

                ShortRecommended Action
                Control0..*
                TypeExtension(Recommended Action) (Extension Type: Reference(Medication Recommendation, Followup Recommendation))
                Is Modifierfalse
                Must Supportfalse
                Summaryfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                18. DiagnosticReport.extension:genomic-risk-assessment
                Slice Namegenomic-risk-assessment
                Definition

                RiskAssessment delivered as part of a genomics report or observation

                ShortGenomic Risk Assessment
                Control0..*
                TypeExtension(Genomic Risk Assessment) (Extension Type: Reference(RiskAssessment))
                Is Modifierfalse
                Must Supportfalse
                Summaryfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                20. DiagnosticReport.extension:coded-note
                Slice Namecoded-note
                Definition

                Adds codified notes to a report to capture additional content

                ShortComments about the report that also contain a coded type
                Comments

                May include general statements about the report, or statements about significant, unexpected or unreliable results values, or information about its source when relevant to its interpretation. The CodedAnnotation data type, while not allowing for or intending to make the content computable, does allow the author to indicate the type of note. This does not replace the use of results or conclusion or conclusionCode. One important note is that Annotation is a FHIR data type, this is NOT about annotations in the genomic context.

                Control0..*
                TypeExtension(Genomic Report Note) (Extension Type: Annotation(Coded Annotation))
                Is Modifierfalse
                Must Supportfalse
                Summaryfalse
                Requirements

                Need to be able to provide free text additional information. Notes SHALL NOT contain information which can be captured in a structured way.

                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                22. DiagnosticReport.extension:supporting-info
                Slice Namesupporting-info
                Definition

                Other resources from the patient record that may be relevant to the event. The information from these resources was either used to create the instance or is provided to help with its interpretation. This extension should not be used if more specific inline elements or extensions are available. For example, use Observation.hasMember instead of supportingInformation for representing the members of an Observation panel.

                ShortOther information that may be relevant to this event.
                Control0..*
                TypeExtension(Supporting info) (Extension Type: Reference(Resource))
                Is Modifierfalse
                Must Supportfalse
                Summaryfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                24. DiagnosticReport.extension:hla-genotyping-results-allele-database
                Slice Namehla-genotyping-results-allele-database
                Definition

                Allele Database.

                ShortAllele Database
                Control0..1
                TypeExtension(Allele Database) (Extension Type: CodeableConcept)
                Is Modifierfalse
                Must Supportfalse
                Summaryfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                26. DiagnosticReport.extension:hla-genotyping-results-glstring
                Slice Namehla-genotyping-results-glstring
                Definition

                glstring.

                Shortglstring
                Control0..1
                TypeExtension(GLString) (Complex Extension)
                Is Modifierfalse
                Must Supportfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                28. DiagnosticReport.extension:workflow-relatedArtifact
                Slice Nameworkflow-relatedArtifact
                Definition

                Documents the 'knowledge artifacts' relevant to the base resource such as citations, supporting evidence, documentation of processes, caveats around testing methodology.

                ShortDocumentation relevant to the 'parent' resource
                Comments

                Note that in contrast this extension, the supportingInfo extension references other resources from the patient record that were used in creating the resource.

                Control0..*
                TypeExtension(Related artifact) (Extension Type: RelatedArtifact)
                Is Modifierfalse
                Must Supportfalse
                Summaryfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                30. DiagnosticReport.modifierExtension
                Definition

                May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.

                Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).

                ShortExtensions that cannot be ignored
                Comments

                There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                Control0..*
                TypeExtension
                Is Modifiertrue because Modifier extensions are expected to modify the meaning or interpretation of the resource that contains them
                Must Supportfalse
                Summarytrue
                Requirements

                Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions.

                Alternate Namesextensions, user content
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                32. DiagnosticReport.identifier
                Definition

                Identifiers assigned to this report by the performer or other systems.

                ShortBusiness identifier for report
                Comments

                Usually assigned by the Information System of the diagnostic service provider (filler id).

                NoteThis is a business identifier, not a resource identifier (see discussion)
                Control0..*
                TypeIdentifier
                Is Modifierfalse
                Must Supportfalse
                Summarytrue
                Requirements

                Need to know what identifier to use when making queries about this report from the source laboratory, and for linking to the report outside FHIR context.

                Alternate NamesReportID, Filler ID, Placer ID
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                34. DiagnosticReport.basedOn
                Definition

                Details concerning a service requested.

                ShortWhat was requested
                Comments

                Note: Usually there is one test request for each result, however in some circumstances multiple test requests may be represented using a single test result resource. Note that there are also cases where one request leads to multiple reports.

                Control0..*
                TypeReference(CarePlan, ImmunizationRecommendation, MedicationRequest, NutritionOrder, ServiceRequest)
                Is Modifierfalse
                Must Supportfalse
                Summaryfalse
                Requirements

                This allows tracing of authorization for the report and tracking whether proposals/recommendations were acted upon.

                Alternate NamesRequest
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                36. DiagnosticReport.status
                Definition

                The status of the diagnostic report.

                Shortregistered | partial | preliminary | modified | final | amended | corrected | appended | cancelled | entered-in-error | unknown
                Control1..1
                BindingThe codes SHALL be taken from DiagnosticReportStatus
                (required to http://hl7.org/fhir/ValueSet/diagnostic-report-status|6.0.0-ballot3)

                The status of the diagnostic report.

                Typecode
                Is Modifiertrue because This element is labeled as a modifier because it is a status element that contains status entered-in-error which means that the resource should not be treated as valid
                Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                Must Supportfalse
                Summarytrue
                Requirements

                Diagnostic services routinely issue provisional/incomplete reports, and sometimes withdraw previously released reports.

                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                38. DiagnosticReport.category
                Definition

                A code that classifies the clinical discipline, department or diagnostic service that created the report (e.g. cardiology, biochemistry, hematology, MRI). This is used for searching, sorting and display purposes.

                ShortService category
                Comments

                Multiple categories are allowed using various categorization schemes. The level of granularity is defined by the category concepts in the value set. More fine-grained filtering can be performed using the metadata and/or terminology hierarchy in DiagnosticReport.code.

                Control1..*
                BindingFor example codes, see DiagnosticServiceSectionCodes
                (example to http://hl7.org/fhir/ValueSet/diagnostic-service-sections|6.0.0-ballot3)

                HL7 V2 table 0074

                TypeCodeableConcept
                Is Modifierfalse
                Must Supportfalse
                Summarytrue
                Alternate NamesDepartment, Sub-department, Service, Discipline
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                SlicingThis element introduces a set of slices on DiagnosticReport.category. The slices areUnordered and Open, and can be differentiated using the following discriminators:
                • value @ coding
                • 40. DiagnosticReport.category:Genetics
                  Slice NameGenetics
                  Definition

                  A code that classifies the clinical discipline, department or diagnostic service that created the report (e.g. cardiology, biochemistry, hematology, MRI). This is used for searching, sorting and display purposes.

                  ShortService category
                  Comments

                  Multiple categories are allowed using various categorization schemes. The level of granularity is defined by the category concepts in the value set. More fine-grained filtering can be performed using the metadata and/or terminology hierarchy in DiagnosticReport.code.

                  Control1..1
                  BindingFor example codes, see DiagnosticServiceSectionCodes
                  (example to http://hl7.org/fhir/ValueSet/diagnostic-service-sections|6.0.0-ballot3)

                  HL7 V2 table 0074

                  TypeCodeableConcept
                  Is Modifierfalse
                  Must Supportfalse
                  Summarytrue
                  Alternate NamesDepartment, Sub-department, Service, Discipline
                  Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                  42. DiagnosticReport.category:Genetics.id
                  Definition

                  Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

                  ShortUnique id for inter-element referencing
                  Control0..1
                  This element is affected by the following invariants: ele-1
                  Typeid
                  Is Modifierfalse
                  XML FormatIn the XML format, this property is represented as an attribute.
                  Summaryfalse
                  44. DiagnosticReport.category:Genetics.extension
                  Definition

                  May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

                  ShortAdditional content defined by implementations
                  Comments

                  There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                  Control0..*
                  TypeExtension
                  Is Modifierfalse
                  Summaryfalse
                  Alternate Namesextensions, user content
                  Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                  SlicingThis element introduces a set of slices on DiagnosticReport.category.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
                  • value @ url
                  • 46. DiagnosticReport.category:Genetics.coding
                    Definition

                    A reference to a code defined by a terminology system.

                    ShortCode defined by a terminology system
                    Comments

                    Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labeled as UserSelected = true.

                    Control1..1
                    TypeCoding
                    Is Modifierfalse
                    Summaryfalse
                    Requirements

                    Allows for alternative encodings within a code system, and translations to other code systems.

                    Pattern Value{
                      "system" : "http://terminology.hl7.org/CodeSystem/v2-0074",
                      "code" : "GE"
                    }
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    48. DiagnosticReport.category:Genetics.text
                    Definition

                    A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user.

                    ShortPlain text representation of the concept
                    Comments

                    Very often the text is the same as a displayName of one of the codings.

                    Control0..1
                    Typestring
                    Is Modifierfalse
                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                    Summaryfalse
                    Requirements

                    The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source.

                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    50. DiagnosticReport.code
                    Definition

                    A code or name that describes this diagnostic report.

                    ShortName/Code for this diagnostic report
                    Comments

                    DiagnosticReport.code is primarily meant to characterize the nature of the entire report, not to summarize the content in detail. In the case where multiple orderables are included in a single report, then the single DiagnosticReport.code would represent the entire 'panel' that the report is covering.

                    Control1..1
                    BindingThe codes SHOULD be taken from LOINCDiagnosticReportCodes
                    (preferred to http://hl7.org/fhir/ValueSet/report-codes|6.0.0-ballot3)

                    LOINC Codes for Diagnostic Reports

                    TypeCodeableConcept
                    Is Modifierfalse
                    Must Supportfalse
                    Summarytrue
                    Alternate NamesType
                    Pattern Value{
                      "coding" : [{
                        "system" : "http://loinc.org",
                        "code" : "51969-4"
                      }]
                    }
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    52. DiagnosticReport.subject
                    Definition

                    The subject of the report. Usually, but not always, this is a patient. However, diagnostic services also perform analyses on specimens collected from a variety of other sources.

                    ShortThe subject of the report - usually, but not always, the patient
                    Control0..1
                    TypeReference(Patient, Group, Device, Location, Organization, Practitioner, Medication, Substance, BiologicallyDerivedProduct)
                    Is Modifierfalse
                    Must Supportfalse
                    Summarytrue
                    Requirements

                    SHALL know the subject context.

                    Alternate NamesPatient
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    54. DiagnosticReport.relatesTo
                    Definition

                    Other DiagnosticReports that the current DiagnosticReport replaces, amendens, extends, or otherwise relates to.

                    ShortRelated DiagnosticReports
                    Control0..*
                    TypeRelatedArtifact
                    Is Modifierfalse
                    Must Supportfalse
                    Summaryfalse
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    56. DiagnosticReport.encounter
                    Definition

                    The encounter (e.g. a patient and healthcare provider interaction) that is associated with the DiagnosticReport.

                    ShortEncounter associated with the DiagnosticReport
                    Comments

                    This will typically be the encounter, when it exists, during which the data or specimens (e.g. imaging, blood draw, or assessment procedure) that are being reported by the DiagnosticReport were obtained/acquired. When a DiagnosticReport is based on a ServiceRequest (order), the ServiceRequest.encounter referenced in DiagnosticReport.basedOn may be used to associate the two.

                    Control0..1
                    TypeReference(Encounter)
                    Is Modifierfalse
                    Must Supportfalse
                    Summarytrue
                    Requirements

                    Links the request to the Encounter context.

                    Alternate NamesContext
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    58. DiagnosticReport.effective[x]
                    Definition

                    The time or time-period the observed values are related to. When the subject of the report is a patient, this is usually either the time of the procedure or of specimen collection(s), but very often the source of the date/time is not known, only the date/time itself.

                    ShortClinically relevant time/time-period for the results that are included in the report
                    Comments

                    If the diagnostic procedure was performed on the patient, this is the time it was performed. If there are specimens, the diagnostically relevant time can be derived from the specimen collection times, but the specimen information is not always available, and the exact relationship between the specimens and the diagnostically relevant time is not always automatic.

                    Control0..1
                    TypedateTime
                    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
                    Is Modifierfalse
                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                    Must Supportfalse
                    Summarytrue
                    Requirements

                    Need to know where in the patient history to file/present this report.

                    Alternate NamesObservation time, Effective Time, Occurrence
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    60. DiagnosticReport.issued
                    Definition

                    The date and time that this version of the report was made available to providers, typically after the report was reviewed and verified.

                    ShortDateTime this version was made
                    Comments

                    May be different from the update time of the resource itself, because that is the status of the record (potentially a secondary copy), not the actual release time of the report.

                    Control0..1
                    Typeinstant
                    Is Modifierfalse
                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                    Must Supportfalse
                    Summarytrue
                    Requirements

                    Clinicians need to be able to check the date that the report was released.

                    Alternate NamesDate published, Date Issued, Date Verified
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    62. DiagnosticReport.procedure
                    Definition

                    The procedure(s) that are reported on in the DiagnosticReport.

                    ShortThe procedure(s) from which the report was produced
                    Comments

                    This is a summary of the report, not a list of results.

                    Control0..*
                    TypeReference(Procedure)
                    Is Modifierfalse
                    Must Supportfalse
                    Summarytrue
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    64. DiagnosticReport.performer
                    Definition

                    The diagnostic service that is responsible for issuing the report.

                    ShortResponsible Diagnostic Service
                    Comments

                    This is not necessarily the source of the atomic data items or the entity that interpreted the results. It is the entity that takes responsibility for the clinical report. In the regulated context of diagnostic laboratory work on humans, it is extremely likely that regulation requires a human performer. Point of care testing, veterinary testing, drug screens, and environmental surveillance are common cases where the device is the performer with no additional human interaction or direct oversight.

                    Control0..*
                    TypeReference(Practitioner, PractitionerRole, Organization, CareTeam, HealthcareService, Device)
                    Is Modifierfalse
                    Must Supportfalse
                    Summarytrue
                    Requirements

                    Need to know whom to contact if there are queries about the results. Also may need to track the source of reports for secondary data analysis.

                    Alternate NamesLaboratory, Service, Practitioner, Department, Company, Authorized by, Director
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    66. DiagnosticReport.resultsInterpreter
                    Definition

                    The practitioner or organization that is responsible for the report's conclusions and interpretations.

                    ShortPrimary result interpreter
                    Comments

                    Might not be the same entity that takes responsibility for the clinical report.

                    Control0..*
                    TypeReference(Practitioner, PractitionerRole, Organization, CareTeam)
                    Is Modifierfalse
                    Must Supportfalse
                    Summarytrue
                    Requirements

                    Need to know whom to contact if there are queries about the results. Also may need to track the source of reports for secondary data analysis.

                    Alternate NamesAnalyzed by, Reported by
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    68. DiagnosticReport.specimen
                    Definition

                    Details about the specimens on which this diagnostic report is based.

                    ShortSpecimens this report is based on
                    Comments

                    If the specimen is sufficiently specified with a code in the test result name, then this additional data may be redundant. If there are multiple specimens, these may be represented per observation or group.

                    Control0..*
                    TypeReference(Specimen)
                    Is Modifierfalse
                    Must Supportfalse
                    Summaryfalse
                    Requirements

                    Need to be able to report information about the collected specimens on which the report is based.

                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    70. DiagnosticReport.result
                    Definition

                    Observations that are part of this diagnostic report.

                    ShortObservations
                    Comments

                    Observations can contain observations.

                    Control0..*
                    This element is affected by the following invariants: dgr-1
                    TypeReference(Observation)
                    Is Modifierfalse
                    Must Supportfalse
                    Summaryfalse
                    Requirements

                    Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                    Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    SlicingThis element introduces a set of slices on DiagnosticReport.result. The slices areUnordered and Open, and can be differentiated using the following discriminators:
                    • profile @ resolve()
                    • 72. DiagnosticReport.result:diagnostic-implication
                      Slice Namediagnostic-implication
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortDiagnostic Implication
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Diagnostic Implication)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      74. DiagnosticReport.result:therapeutic-implication
                      Slice Nametherapeutic-implication
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortTherapeutic Implication
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Therapeutic Implication)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      76. DiagnosticReport.result:molecular-consequence
                      Slice Namemolecular-consequence
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortMolecular Consequence
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Molecular Consequence)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      78. DiagnosticReport.result:variant
                      Slice Namevariant
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortVariant
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Variant)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      80. DiagnosticReport.result:sequence-phase-relation
                      Slice Namesequence-phase-relation
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortSequence Phase Relationship
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Sequence Phase Relationship)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      82. DiagnosticReport.result:genotype
                      Slice Namegenotype
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortGenotype
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Genotype)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      84. DiagnosticReport.result:haplotype
                      Slice Namehaplotype
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortHaplotype
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Haplotype)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      86. DiagnosticReport.result:biomarker
                      Slice Namebiomarker
                      Definition

                      Observations that are part of this diagnostic report.

                      ShortMolecularBiomarker
                      Comments

                      Observations can contain observations.

                      Control0..*
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Molecular Biomarker)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to support individual results, or groups of results, where the result grouping is arbitrary, but meaningful.

                      Alternate NamesData, Atomic Value, Result, Atomic result, Data, Test, Analyte, Battery, Organizer
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      88. DiagnosticReport.note
                      Definition

                      Comments about the diagnostic report.

                      ShortComments about the diagnostic report
                      Comments

                      May include general statements about the diagnostic report, or statements about significant, unexpected or unreliable results values contained within the diagnostic report, or information about its source when relevant to its interpretation.

                      Control0..*
                      TypeAnnotation
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to be able to provide free text additional information.

                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      90. DiagnosticReport.study
                      Definition

                      One or more links to full details of any study performed during the diagnostic investigation. An ImagingStudy might comprise a set of radiologic images obtained via a procedure that are analyzed as a group. Typically, this is imaging performed by DICOM enabled modalities, but this is not required. A fully enabled PACS viewer can use this information to provide views of the source images. A GenomicStudy might comprise one or more analyses, each serving a specific purpose. These analyses may vary in method (e.g., karyotyping, CNV, or SNV detection), performer, software, devices used, or regions targeted.

                      ShortReference to full details of an analysis associated with the diagnostic report
                      Comments

                      For laboratory-type studies like GenomeStudy, type resources will be used for tracking additional metadata and workflow aspects of complex studies. ImagingStudy and the media element are somewhat overlapping - typically, the list of image references in the media element will also be found in one of the imaging study resources. However, each caters to different types of displays for different types of purposes. Neither, either, or both may be provided.

                      Control0..*
                      TypeReference(GenomicStudy, ImagingStudy)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      92. DiagnosticReport.supportingInfo
                      Definition

                      This backbone element contains supporting information that was used in the creation of the report not included in the results already included in the report.

                      ShortAdditional information supporting the diagnostic report
                      Control0..*
                      TypeBackboneElement
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Invariantsele-1: All FHIR elements must have a @value or children or both (hasValue() or (children().count() > id.count()))
                      94. DiagnosticReport.supportingInfo.id
                      Definition

                      Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

                      ShortUnique id for inter-element referencing
                      Control0..1
                      This element is affected by the following invariants: ele-1
                      Typestring
                      Is Modifierfalse
                      XML FormatIn the XML format, this property is represented as an attribute.
                      Summaryfalse
                      96. DiagnosticReport.supportingInfo.extension
                      Definition

                      May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

                      ShortAdditional content defined by implementations
                      Comments

                      There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                      Control0..*
                      TypeExtension
                      Is Modifierfalse
                      Summaryfalse
                      Alternate Namesextensions, user content
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      98. DiagnosticReport.supportingInfo.modifierExtension
                      Definition

                      May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.

                      Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).

                      ShortExtensions that cannot be ignored even if unrecognized
                      Comments

                      There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                      Control0..*
                      TypeExtension
                      Is Modifiertrue because Modifier extensions are expected to modify the meaning or interpretation of the element that contains them
                      Summarytrue
                      Requirements

                      Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions.

                      Alternate Namesextensions, user content, modifiers
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      100. DiagnosticReport.supportingInfo.type
                      Definition

                      The code value for the role of the supporting information in the diagnostic report.

                      ShortSupporting information role code
                      Control1..1
                      BindingFor example codes, see hl7VS-VS-observationType
                      (example to http://terminology.hl7.org/ValueSet/v2-0936)

                      The code value for the role of the supporting information in the diagnostic report.

                      TypeCodeableConcept
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      102. DiagnosticReport.supportingInfo.reference
                      Definition

                      The reference for the supporting information in the diagnostic report.

                      ShortSupporting information reference
                      Control1..1
                      TypeReference(ImagingStudy, Procedure, Observation, DiagnosticReport, Citation, FamilyMemberHistory, AllergyIntolerance, DeviceUsage, Condition, GenomicStudy)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      104. DiagnosticReport.media
                      Definition

                      A list of key images or data associated with this report. The images or data are generally created during the diagnostic process, and may be directly of the patient, or of treated specimens (i.e. slides of interest).

                      ShortKey images or data associated with this report
                      Control0..*
                      TypeBackboneElement
                      Is Modifierfalse
                      Must Supportfalse
                      Summarytrue
                      Requirements

                      Many diagnostic services include images or data in the report as part of their service.

                      Alternate NamesDICOM, Slides, Scans
                      Invariantsele-1: All FHIR elements must have a @value or children or both (hasValue() or (children().count() > id.count()))
                      106. DiagnosticReport.media.id
                      Definition

                      Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

                      ShortUnique id for inter-element referencing
                      Control0..1
                      This element is affected by the following invariants: ele-1
                      Typestring
                      Is Modifierfalse
                      XML FormatIn the XML format, this property is represented as an attribute.
                      Summaryfalse
                      108. DiagnosticReport.media.extension
                      Definition

                      May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

                      ShortAdditional content defined by implementations
                      Comments

                      There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                      Control0..*
                      TypeExtension
                      Is Modifierfalse
                      Summaryfalse
                      Alternate Namesextensions, user content
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      110. DiagnosticReport.media.modifierExtension
                      Definition

                      May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.

                      Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).

                      ShortExtensions that cannot be ignored even if unrecognized
                      Comments

                      There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                      Control0..*
                      TypeExtension
                      Is Modifiertrue because Modifier extensions are expected to modify the meaning or interpretation of the element that contains them
                      Summarytrue
                      Requirements

                      Modifier extensions allow for extensions that cannot be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the definition of modifier extensions.

                      Alternate Namesextensions, user content, modifiers
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      112. DiagnosticReport.media.comment
                      Definition

                      A comment about the image or data. Typically, this is used to provide an explanation for why the image or data is included, or to draw the viewer's attention to important features.

                      ShortComment about the image or data (e.g. explanation)
                      Comments

                      The comment should be displayed with the image or data. It would be common for the report to include additional discussion of the image or data contents or in other sections such as the conclusion.

                      Control0..1
                      Typestring
                      Is Modifierfalse
                      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      The provider of the report should make a comment about each image or data included in the report.

                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      114. DiagnosticReport.media.link
                      Definition

                      Reference to the image or data source.

                      ShortReference to the image or data source
                      Control1..1
                      TypeReference(DocumentReference)
                      Is Modifierfalse
                      Must Supportfalse
                      Summarytrue
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      116. DiagnosticReport.composition
                      Definition

                      Reference to a Composition resource instance that provides structure for organizing the contents of the DiagnosticReport.

                      ShortReference to a Composition resource for the DiagnosticReport structure
                      Comments

                      The Composition provides structure to the content of the DiagnosticReport (and only contains contents referenced in the DiagnosticReport) - e.g., to order the sections of an anatomic pathology structured report.

                      Control0..1
                      This element is affected by the following invariants: dgr-1
                      TypeReference(Composition)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      118. DiagnosticReport.conclusion
                      Definition

                      Concise and clinically contextualized summary conclusion (interpretation/impression) of the diagnostic report.

                      ShortAssessment of overall results
                      Control0..1
                      Typemarkdown
                      Is Modifierfalse
                      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to be able to provide a conclusion that is not lost among the basic result data.

                      Alternate NamesReport
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      120. DiagnosticReport.conclusionCode
                      Definition

                      One or more codes and/or references that represent the summary conclusion (interpretation/impression) of the diagnostic report.

                      ShortCoarse overall interpretation of the genomic results
                      Control0..*
                      BindingFor example codes, see SNOMEDCTClinicalFindings
                      (example to http://hl7.org/fhir/ValueSet/clinical-findings|6.0.0-ballot3)

                      SNOMED CT Clinical Findings

                      TypeCodeableReference(Observation, Condition)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      122. DiagnosticReport.recomendation
                      Definition

                      Proposed follow-up actions based on the findings and interpretations of the diagnostic test for which this report is the subject.

                      ShortRecommendations based on findings and interpretations
                      Comments

                      The resources that should be referenced include CarePlan, ServiceRequest, CommunicationRequest, etc. that allow for proposed actions and next steps.

                      Control0..*
                      TypeCodeableReference(Resource)
                      Is Modifierfalse
                      Must Supportfalse
                      Summarytrue
                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      124. DiagnosticReport.presentedForm
                      Definition

                      Rich text representation of the entire result as issued by the diagnostic service. Multiple formats are allowed but they SHALL be semantically equivalent.

                      ShortEntire report as issued
                      Comments

                      "application/pdf" is recommended as the most reliable and interoperable in this context.

                      Control0..*
                      TypeAttachment
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Gives laboratory the ability to provide its own fully formatted report for clinical fidelity.

                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                      126. DiagnosticReport.communication
                      Definition

                      Communications initiated during the generation of the DiagnosticReport by members of the organization fulfilling that order. e.g. direct communication of time critical results by the radiologist to the referring physician.

                      ShortCommunication initiated during the reporting process
                      Comments

                      Note: This can document attempted communications as well as completed communications. Communications that follow publication of the report (e.g. between the referring physician and the patient or a subsequent specialist) are not referenced here. DiagnosticReport.recommendation might also contain references to ServiceRequest or CommunicationRequest instances for proposed subsequent communications.

                      Control0..*
                      TypeReference(Communication)
                      Is Modifierfalse
                      Must Supportfalse
                      Summaryfalse
                      Requirements

                      Need to record details of such communications for medico-legal purposes, to support review or the improvement of conformance to best practices for patient safety and quality of care.

                      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))