Genomics Reporting Implementation Guide
3.0.0 - release International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: SequencePhaseRelationExample1 - XML Representation

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<Observation xmlns="http://hl7.org/fhir">
  <id value="SequencePhaseRelationExample1"/>
  <meta>
    <profile
             value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship"/>
  </meta>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: Observation SequencePhaseRelationExample1</b></p><a name="SequencePhaseRelationExample1"> </a><a name="hcSequencePhaseRelationExample1"> </a><a name="SequencePhaseRelationExample1-en-US"> </a><p><b>status</b>: Final</p><p><b>category</b>: <span title="Codes:{http://terminology.hl7.org/CodeSystem/observation-category laboratory}">Laboratory</span>, <span title="Codes:{http://terminology.hl7.org/CodeSystem/v2-0074 GE}">Genetics</span></p><p><b>code</b>: <span title="Codes:{http://loinc.org 82120-7}">Allelic phase</span></p><p><b>subject</b>: <a href="Patient-CGPatientExample01.html">Adam B. Everyman  Male, DoB: 1951-01-20 ( Medical Record Number: m123 (use: usual, ))</a></p><p><b>effective</b>: 2019-04-01</p><p><b>issued</b>: 2019-03-05 16:04:44+0000</p><p><b>performer</b>: <a href="Organization-ExampleOrg.html">Organization some lab</a></p><p><b>value</b>: <span title="Codes:{http://terminology.hl7.org/CodeSystem/sequence-phase-relationship-cs Cis}">Cis</span></p><p><b>derivedFrom</b>: </p><ul><li><a href="Observation-VariantExample1.html">Observation Genetic variant assessment</a></li><li><a href="Observation-VariantExample2.html">Observation Genetic variant assessment</a></li></ul></div>
  </text>
  <status value="final"/>
  <category>
    <coding>
      <system
              value="http://terminology.hl7.org/CodeSystem/observation-category"/>
      <code value="laboratory"/>
    </coding>
  </category>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
      <code value="GE"/>
    </coding>
  </category>
  <code>
    <coding>
      <system value="http://loinc.org"/>
      <code value="82120-7"/>
    </coding>
  </code>
  <subject>🔗 
    <reference value="Patient/CGPatientExample01"/>
  </subject>
  <effectiveDateTime value="2019-04-01"/>
  <issued value="2019-03-05T16:04:44+00:00"/>
  <performer>🔗 
    <reference value="Organization/ExampleOrg"/>
  </performer>
  <valueCodeableConcept>
    <coding>
      <system
              value="http://terminology.hl7.org/CodeSystem/sequence-phase-relationship-cs"/>
      <code value="Cis"/>
      <display value="Cis"/>
    </coding>
  </valueCodeableConcept>
  <derivedFrom>🔗 
    <reference value="Observation/VariantExample1"/>
  </derivedFrom>
  <derivedFrom>🔗 
    <reference value="Observation/VariantExample2"/>
  </derivedFrom>
</Observation>