Genomics Reporting Implementation Guide
3.0.0 - release International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: somaticVCFfile - JSON Representation

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{
  "resourceType" : "DocumentReference",
  "id" : "somaticVCFfile",
  "meta" : {
    "profile" : [
      🔗 "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-data-file"
    ]
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: DocumentReference somaticVCFfile</b></p><a name=\"somaticVCFfile\"> </a><a name=\"hcsomaticVCFfile\"> </a><a name=\"somaticVCFfile-en-US\"> </a><p><b>identifier</b>: <code>http://www.somesystemabc.net/identifiers/files</code>/1134121</p><p><b>status</b>: Current</p><p><b>docStatus</b>: Preliminary</p><p><b>description</b>: VCF file containing identified variants</p><p><b>securityLabel</b>: <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/v3-Confidentiality R}\">Restricted</span></p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Url</b></td><td><b>Title</b></td></tr><tr><td style=\"display: none\">*</td><td><a href=\"https://chat.fhir.org/user_uploads/10155/Rp_GBGx6jz5reuS_Py7XQDjr/somaticVCFFile.vcf\">https://chat.fhir.org/user_uploads/10155/Rp_GBGx6jz5reuS_Py7XQDjr/somaticVCFFile.vcf</a></td><td>somatic VCF File</td></tr></table></blockquote></div>"
  },
  "identifier" : [
    {
      "system" : "http://www.somesystemabc.net/identifiers/files",
      "value" : "1134121"
    }
  ],
  "status" : "current",
  "docStatus" : "preliminary",
  "description" : "VCF file containing identified variants",
  "securityLabel" : [
    {
      "coding" : [
        {
          "system" : "http://terminology.hl7.org/CodeSystem/v3-Confidentiality",
          "code" : "R",
          "display" : "Restricted"
        }
      ]
    }
  ],
  "content" : [
    {
      "attachment" : {
        "url" : "https://chat.fhir.org/user_uploads/10155/Rp_GBGx6jz5reuS_Py7XQDjr/somaticVCFFile.vcf",
        "title" : "somatic VCF File"
      }
    }
  ]
}