Genomics Reporting Implementation Guide
3.0.0 - STU3 International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: Genomic Study Status Map - JSON Representation

Draft as of 2024-12-12

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{
  "resourceType" : "ConceptMap",
  "id" : "GenomicStudyStatusMap",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ConceptMap GenomicStudyStatusMap</b></p><a name=\"GenomicStudyStatusMap\"> </a><a name=\"hcGenomicStudyStatusMap\"> </a><a name=\"GenomicStudyStatusMap-en-US\"> </a><p>Mapping from <a href=\"http://hl7.org/fhir/R4/valueset-event-status.html\">EventStatus</a> to <a href=\"ValueSet-genomic-study-status-vs.html\">Genomic Study Status ValueSet</a></p><br/><p><b>Group 1 </b>Mapping from <a href=\"http://hl7.org/fhir/R4/codesystem-event-status.html\">EventStatus</a> to <a href=\"CodeSystem-genomic-study-status-cs.html\">Genomic Study Status CodeSystem</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>completed</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>available</td></tr><tr><td>preparation</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>registered</td></tr><tr><td>in-progress</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>registered</td></tr><tr><td>on-hold</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>registered</td></tr><tr><td>not-done</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>cancelled</td></tr><tr><td>stopped</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#wider\" title=\"wider\">maps to wider concept</a></td><td>cancelled</td></tr><tr><td>entered-in-error</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equal\" title=\"equal\">is equal to</a></td><td>entered-in-error</td></tr><tr><td>unknown</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>unknown</td></tr></table></div>"
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode" : "cg"
    }
  ],
  "url" : "http://hl7.org/fhir/uv/genomics-reporting/ConceptMap/GenomicStudyStatusMap",
  "version" : "3.0.0",
  "name" : "GenomicStudyStatusMap",
  "title" : "Genomic Study Status Map",
  "status" : "draft",
  "experimental" : false,
  "date" : "2024-12-12T20:13:16+00:00",
  "publisher" : "HL7 International / Clinical Genomics",
  "contact" : [
    {
      "name" : "HL7 International / Clinical Genomics",
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://www.hl7.org/Special/committees/clingenomics"
        },
        {
          "system" : "email",
          "value" : "cg@lists.HL7.org"
        }
      ]
    }
  ],
  "description" : "Mapping from Procedure's EventStatus (http://hl7.org/fhir/ValueSet/event-status) ValueSet for 'status' to http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomicstudy-status-vs codes",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "001",
          "display" : "World"
        }
      ]
    }
  ],
  "sourceCanonical" : "http://hl7.org/fhir/ValueSet/event-status",
  "targetCanonical" : "http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genomic-study-status-vs",
  "group" : [
    {
      "source" : "http://hl7.org/fhir/event-status",
      "target" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-status-cs",
      "element" : [
        {
          "code" : "completed",
          "display" : "Completed",
          "target" : [
            {
              "code" : "available",
              "display" : "Available",
              "equivalence" : "equivalent"
            }
          ]
        },
        {
          "code" : "preparation",
          "display" : "Preparation",
          "target" : [
            {
              "code" : "registered",
              "display" : "Registered",
              "equivalence" : "wider"
            }
          ]
        },
        {
          "code" : "in-progress",
          "display" : "In Progress",
          "target" : [
            {
              "code" : "registered",
              "display" : "Registered",
              "equivalence" : "wider"
            }
          ]
        },
        {
          "code" : "on-hold",
          "display" : "On Hold",
          "target" : [
            {
              "code" : "registered",
              "display" : "Registered",
              "equivalence" : "wider"
            }
          ]
        },
        {
          "code" : "not-done",
          "display" : "Not Done",
          "target" : [
            {
              "code" : "cancelled",
              "display" : "Cancelled",
              "equivalence" : "wider"
            }
          ]
        },
        {
          "code" : "stopped",
          "display" : "Stopped",
          "target" : [
            {
              "code" : "cancelled",
              "display" : "Cancelled",
              "equivalence" : "wider"
            }
          ]
        },
        {
          "code" : "entered-in-error",
          "display" : "Entered in Error",
          "target" : [
            {
              "code" : "entered-in-error",
              "display" : "Entered in Error",
              "equivalence" : "equal"
            }
          ]
        },
        {
          "code" : "unknown",
          "display" : "Unknown",
          "target" : [
            {
              "code" : "unknown",
              "display" : "Unknown",
              "equivalence" : "equivalent"
            }
          ]
        }
      ]
    }
  ]
}