Genomics Reporting Implementation Guide
3.0.0 - release International flag

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 3.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: Genomic Study Change Type CodeSystem - XML Representation

Active as of 2024-11-24

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<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="genomic-study-change-type-cs"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: CodeSystem genomic-study-change-type-cs</b></p><a name="genomic-study-change-type-cs"> </a><a name="hcgenomic-study-change-type-cs"> </a><a name="genomic-study-change-type-cs-en-US"> </a><p>This case-sensitive code system <code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-change-type-cs</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style="white-space:nowrap">DNA<a name="genomic-study-change-type-cs-DNA"> </a></td><td>DNA change</td><td>Change that involves Deoxyribonucleic acid (DNA) sequences.</td></tr><tr><td style="white-space:nowrap">RNA<a name="genomic-study-change-type-cs-RNA"> </a></td><td>RNA change</td><td>Change that involves Ribonucleic Acid (RNA) sequences.</td></tr><tr><td style="white-space:nowrap">AA<a name="genomic-study-change-type-cs-AA"> </a></td><td>Protein/amino Acids change</td><td>Change that involves Amino Acid (AA) or protein sequences.</td></tr><tr><td style="white-space:nowrap">CHR<a name="genomic-study-change-type-cs-CHR"> </a></td><td>Chromosomal changes</td><td>Change that involves number or strcture of chromosomes.</td></tr><tr><td style="white-space:nowrap">CNV<a name="genomic-study-change-type-cs-CNV"> </a></td><td>Copy number variations</td><td>Change that involves copy number variations among various genomes.</td></tr></table></div>
  </text>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg">
    <valueCode value="cg"/>
  </extension>
  <url
       value="http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genomic-study-change-type-cs"/>
  <version value="3.0.0"/>
  <name value="GenomicStudyChangeTypeCS"/>
  <title value="Genomic Study Change Type CodeSystem"/>
  <status value="active"/>
  <experimental value="true"/>
  <date value="2024-11-24T13:22:27+00:00"/>
  <publisher value="HL7 International / Clinical Genomics"/>
  <contact>
    <name value="HL7 International / Clinical Genomics"/>
    <telecom>
      <system value="url"/>
      <value value="http://www.hl7.org/Special/committees/clingenomics"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="cg@lists.HL7.org"/>
    </telecom>
  </contact>
  <description
               value="Backport of http://hl7.org/fhir/genomicstudy-changetype"/>
  <jurisdiction>
    <coding>
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
      <code value="001"/>
      <display value="World"/>
    </coding>
  </jurisdiction>
  <caseSensitive value="true"/>
  <content value="complete"/>
  <count value="5"/>
  <concept>
    <code value="DNA"/>
    <display value="DNA change"/>
    <definition
                value="Change that involves Deoxyribonucleic acid (DNA) sequences."/>
  </concept>
  <concept>
    <code value="RNA"/>
    <display value="RNA change"/>
    <definition
                value="Change that involves Ribonucleic Acid (RNA) sequences."/>
  </concept>
  <concept>
    <code value="AA"/>
    <display value="Protein/amino Acids change"/>
    <definition
                value="Change that involves Amino Acid (AA) or protein sequences."/>
  </concept>
  <concept>
    <code value="CHR"/>
    <display value="Chromosomal changes"/>
    <definition
                value="Change that involves number or strcture of chromosomes."/>
  </concept>
  <concept>
    <code value="CNV"/>
    <display value="Copy number variations"/>
    <definition
                value="Change that involves copy number variations among various genomes."/>
  </concept>
</CodeSystem>