Situational Awareness for Novel Epidemic Response, published by HL7 International / Public Health. This guide is not an authorized publication; it is the continuous build for version 1.0.1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-saner/ and changes regularly. See the Directory of published versions
: SARS CoV2 Labs - TTL Representation
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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
a fhir:ValueSet ;
fhir:nodeRole fhir:treeRoot ;
fhir:id [ fhir:v "SARSCoV2Labs"] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/94307-6/\">94307-6</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N1</td></tr><tr><td><a href=\"https://loinc.org/94308-4/\">94308-4</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N2</td></tr><tr><td><a href=\"https://loinc.org/94309-2/\">94309-2</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94310-0/\">94310-0</a></td><td>SARS-like coronavirus N gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94314-2/\">94314-2</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94315-9/\">94315-9</a></td><td>SARS-related coronavirus E gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94316-7/\">94316-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94500-6/\">94500-6</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94531-1/\">94531-1</a></td><td>SARS-CoV-2 (COVID-19) RNA panel - Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94533-7/\">94533-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94534-5/\">94534-5</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94558-4/\">94558-4</a></td><td>SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94559-2/\">94559-2</a></td><td>SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94759-8/\">94759-8</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection</td></tr></table></li></ul></div>"
] ; #
fhir:extension ( [
fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg"^^xsd:anyURI ] ;
fhir:value [ fhir:v "pher" ]
] ) ; #
fhir:url [ fhir:v "http://hl7.org/fhir/uv/saner/ValueSet/SARSCoV2Labs"^^xsd:anyURI] ; #
fhir:identifier ( [
fhir:system [ fhir:v "urn:ietf:rfc:3986"^^xsd:anyURI ] ;
fhir:value [ fhir:v "urn:oid:2.16.840.1.113883.4.642.40.42.48.38" ]
] ) ; #
fhir:version [ fhir:v "1.0.1"] ; #
fhir:name [ fhir:v "SARSCoV2Labs"] ; #
fhir:title [ fhir:v "SARS CoV2 Labs"] ; #
fhir:status [ fhir:v "active"] ; #
fhir:experimental [ fhir:v "false"^^xsd:boolean] ; #
fhir:date [ fhir:v "2020-04-17T01:00:20-04:00"^^xsd:dateTime] ; #
fhir:publisher [ fhir:v "HL7 International / Public Health"] ; #
fhir:contact ( [
( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "http://www.hl7.org/Special/committees/pher" ] ] )
] [
( fhir:telecom [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "pher@lists.hl7.org" ] ] )
] [
fhir:name [ fhir:v "Keith W. Boone" ] ;
( fhir:telecom [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "mailto:kboone@ainq.com" ] ] )
] ) ; #
fhir:description [ fhir:v "This Value Set identifies Lab tests related to detection of current or prior COVID-19 infection."] ; #
fhir:jurisdiction ( [
( fhir:coding [
fhir:system [ fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ] ;
fhir:code [ fhir:v "001" ] ;
fhir:display [ fhir:v "World" ] ] )
] ) ; #
fhir:copyright [ fhir:v "This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc"] ; #
fhir:compose [
( fhir:include [
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
( fhir:concept [
fhir:code [ fhir:v "94307-6" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N1" ] ] [
fhir:code [ fhir:v "94308-4" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N2" ] ] [
fhir:code [ fhir:v "94309-2" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) RNA [Presence] in Unspecified specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94310-0" ] ;
fhir:display [ fhir:v "SARS-like coronavirus N gene [Presence] in Unspecified specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94314-2" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Unspecified specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94315-9" ] ;
fhir:display [ fhir:v "SARS-related coronavirus E gene [Presence] in Unspecified specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94316-7" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94500-6" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94531-1" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) RNA panel - Respiratory specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94533-7" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94534-5" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94558-4" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay" ] ] [
fhir:code [ fhir:v "94559-2" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection" ] ] [
fhir:code [ fhir:v "94759-8" ] ;
fhir:display [ fhir:v "SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection" ] ] ) ] )
] . #
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