Situational Awareness for Novel Epidemic Response
1.0.1 - STU Release

Situational Awareness for Novel Epidemic Response, published by HL7 International Public Health Workgroup. This is not an authorized publication; it is the continuous build for version 1.0.1). This version is based on the current content of https://github.com/HL7/fhir-saner/ and changes regularly. See the Directory of published versions

: SARSCoV2Labs - JSON Representation

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{
  "resourceType" : "ValueSet",
  "id" : "SARSCoV2Labs",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94307-6.html\">94307-6</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N1</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94308-4.html\">94308-4</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N2</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94309-2.html\">94309-2</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94310-0.html\">94310-0</a></td><td>SARS-like coronavirus N gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94314-2.html\">94314-2</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94315-9.html\">94315-9</a></td><td>SARS-related coronavirus E gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94316-7.html\">94316-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94500-6.html\">94500-6</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94531-1.html\">94531-1</a></td><td>SARS-CoV-2 (COVID-19) RNA panel - Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94533-7.html\">94533-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94534-5.html\">94534-5</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94558-4.html\">94558-4</a></td><td>SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94559-2.html\">94559-2</a></td><td>SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"http://details.loinc.org/LOINC/94759-8.html\">94759-8</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection</td></tr></table></li></ul></div>"
  },
  "url" : "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1032.109",
  "version" : "1.0.1",
  "name" : "SARSCoV2Labs",
  "status" : "active",
  "date" : "2020-04-17T01:00:20-04:00",
  "publisher" : "HL7 International Public Health Workgroup",
  "contact" : [
    {
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://hl7.org/Special/committees/pher"
        }
      ]
    },
    {
      "telecom" : [
        {
          "system" : "email",
          "value" : "pher@lists.hl7.org"
        }
      ]
    },
    {
      "name" : "Keith W. Boone",
      "telecom" : [
        {
          "system" : "email",
          "value" : "mailto:kboone@ainq.com"
        }
      ]
    }
  ],
  "description" : "This Value Set identifies Lab tests related to detection of current or prior COVID-19 infection.",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "001"
        }
      ]
    }
  ],
  "copyright" : "This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
          {
            "code" : "94307-6",
            "display" : "SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N1"
          },
          {
            "code" : "94308-4",
            "display" : "SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N2"
          },
          {
            "code" : "94309-2",
            "display" : "SARS-CoV-2 (COVID-19) RNA [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "94310-0",
            "display" : "SARS-like coronavirus N gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "94314-2",
            "display" : "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "94315-9",
            "display" : "SARS-related coronavirus E gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "94316-7",
            "display" : "SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "94500-6",
            "display" : "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "94531-1",
            "display" : "SARS-CoV-2 (COVID-19) RNA panel - Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "94533-7",
            "display" : "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "94534-5",
            "display" : "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "94558-4",
            "display" : "SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay"
          },
          {
            "code" : "94559-2",
            "display" : "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "94759-8",
            "display" : "SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection"
          }
        ]
      }
    ]
  }
}