SGHI FHIR Profile Implementation Guide
0.1.0 - ci-build

SGHI FHIR Profile Implementation Guide, published by Kathurima Kimathi. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/savannahghi/sil_fhir_profile_ig/ and changes regularly. See the Directory of published versions

: Molecular Markers Value Sets - TTL Representation

Active as of 2026-09-15

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/ValueSet/molecular-Markers> a fhir:ValueSet ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "molecular-Markers"] ; # 
  fhir:text [
     fhir:status [ fhir:v "extensions" ] ;
     fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet molecular-Markers</b></p><a name=\"molecular-Markers\"> </a><a name=\"hcmolecular-Markers\"> </a><ul><li>Include these codes as defined in <a href=\"CodeSystem-identifier-codesystem.html\"><code>https://fhir.slade360.co.ke/fhir/CodeSystem/identifier-codesystem</code></a><span title=\"Version is not explicitly stated, which means it is fixed to the version provided in this specification\"> version &#x1F4E6;0.1.0</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-braf\">braf</a></td><td>BRAF Mutation</td><td>A mutation in the BRAF gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-kras\">kras</a></td><td>KRAS Mutation</td><td>A mutation in the KRAS gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-nras\">nras</a></td><td>NRAS Mutation</td><td>A mutation in the NRAS gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-egfr\">egfr</a></td><td>EGFR Mutation</td><td>A mutation in the EGFR gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-alk\">alk</a></td><td>ALK Rearrangement</td><td>A rearrangement involving the ALK gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-her2\">her2</a></td><td>HER2 Amplification</td><td>Amplification of the HER2 gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-pik3ca\">pik3ca</a></td><td>PIK3CA Mutation</td><td>A mutation in the PIK3CA gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-pt53\">pt53</a></td><td>TP53 Mutation</td><td>A mutation in the TP53 gene.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-msi\">msi</a></td><td>Microsatellite Instability</td><td>Instability in short repeated DNA sequences.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-pdli\">pdli</a></td><td>PD-L1 Expression</td><td>Expression of the PD-L1 protein.</td></tr><tr><td><a href=\"CodeSystem-identifier-codesystem.html#identifier-codesystem-other\">other</a></td><td>Other</td><td>A value outside those enumerated for the element being recorded.</td></tr></table></li></ul></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:url [ fhir:v "https://fhir.slade360.co.ke/fhir/ValueSet/molecular-Markers"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "0.1.0"] ; # 
  fhir:name [ fhir:v "SGHISpecimenMolecularMarkersVs"] ; # 
  fhir:title [ fhir:v "Molecular Markers Value Sets"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:date [ fhir:v "2026-09-15T11:40:24+00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "Kathurima Kimathi"] ; # 
  fhir:contact ( [
     fhir:name [ fhir:v "Kathurima Kimathi" ] ;
     fhir:telecom ( [
       fhir:system [ fhir:v "url" ] ;
       fhir:value [ fhir:v "https://www.linkedin.com/in/kathurima-kimathi/" ]
     ] [
       fhir:system [ fhir:v "email" ] ;
       fhir:value [ fhir:v "kathurimakimathi415@gmail.com" ]
     ] )
  ] [
     fhir:name [ fhir:v "Oscar John" ] ;
     fhir:telecom ( [
       fhir:system [ fhir:v "email" ] ;
       fhir:value [ fhir:v "oscarjohnotieno@gmail.com" ] ;
       fhir:use [ fhir:v "work" ]
     ] )
  ] [
     fhir:name [ fhir:v "Kennedy Omondi" ] ;
     fhir:telecom ( [
       fhir:system [ fhir:v "email" ] ;
       fhir:value [ fhir:v "kennankole@gmail.com" ] ;
       fhir:use [ fhir:v "work" ]
     ] )
  ] ) ; # 
  fhir:description [ fhir:v "Molecular Markers Value Sets"] ; # 
  fhir:compose [
     fhir:include ( [
       fhir:system [ fhir:v "https://fhir.slade360.co.ke/fhir/CodeSystem/identifier-codesystem"^^xsd:anyURI ] ;
       fhir:concept ( [
         fhir:code [ fhir:v "braf" ] ;
         fhir:display [ fhir:v "BRAF Mutation" ]
       ] [
         fhir:code [ fhir:v "kras" ] ;
         fhir:display [ fhir:v "KRAS Mutation" ]
       ] [
         fhir:code [ fhir:v "nras" ] ;
         fhir:display [ fhir:v "NRAS Mutation" ]
       ] [
         fhir:code [ fhir:v "egfr" ] ;
         fhir:display [ fhir:v "EGFR Mutation" ]
       ] [
         fhir:code [ fhir:v "alk" ] ;
         fhir:display [ fhir:v "ALK Rearrangement" ]
       ] [
         fhir:code [ fhir:v "her2" ] ;
         fhir:display [ fhir:v "HER2 Amplification" ]
       ] [
         fhir:code [ fhir:v "pik3ca" ] ;
         fhir:display [ fhir:v "PIK3CA Mutation" ]
       ] [
         fhir:code [ fhir:v "pt53" ] ;
         fhir:display [ fhir:v "TP53 Mutation" ]
       ] [
         fhir:code [ fhir:v "msi" ] ;
         fhir:display [ fhir:v "Microsatellite Instability" ]
       ] [
         fhir:code [ fhir:v "pdli" ] ;
         fhir:display [ fhir:v "PD-L1 Expression" ]
       ] [
         fhir:code [ fhir:v "other" ] ;
         fhir:display [ fhir:v "Other" ]
       ] )
     ] )
  ] . #