IDEA4RC FHIR Implementation Guide
0.1.0 - CI Build 150

IDEA4RC FHIR Implementation Guide, published by IDEA4RC Project. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/idea4rc/ and changes regularly. See the Directory of published versions

Logical Model: GeneticTestExpressionI4rc - Detailed Descriptions

Draft as of 2024-11-12

Definitions for the GeneticTestExpression logical model.

Guidance on how to interpret the contents of this table can be found here

0. GeneticTestExpression
Definition

Genetic Test Expression

ShortGenetic Test Expression
Logical ModelInstances of this logical model are not marked to be the target of a Reference
2. GeneticTestExpression.episodeEventReference
Definition

EpisodeEvent element containing the data regarding the patient's cancer

ShortCancer Episode Reference
Control1..1
Typehttp://hl7.eu/fhir/ig/idea4rc/StructureDefinition/EpisodeEvent
Obligations
    ObligationsActor
    SHALL:handle
    4. GeneticTestExpression.geneExpressionAnalysisPerformed
    Definition

    Clarifies whether a gene expression analysis is performed

    ShortIs a gene expression analysis performed ?
    Control0..1
    Typeboolean
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    Obligations
      ObligationsActor
      SHALL:handle
      6. GeneticTestExpression.dateOfGeneExpression
      Definition

      Date of the gene expression analysis

      ShortDate of the gene expression analysis
      Control0..1
      Typedate
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Obligations
        ObligationsActor
        SHALL:handle
        8. GeneticTestExpression.geneMutationAnalysisPerformed
        Definition

        Clarifies whether a gene mutation analysis is performed

        ShortIs a gene mutation analysis performed ?
        Control0..1
        Typeboolean
        Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
        Obligations
          ObligationsActor
          SHALL:handle
          10. GeneticTestExpression.dateOfGeneMutation
          Definition

          Date of the gene mutation analysis

          ShortDate of the gene mutation analysis
          Control0..1
          Typedate
          Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
          Obligations
            ObligationsActor
            SHALL:handle
            12. GeneticTestExpression.testsForChromosomeTranslocationsPerformed
            Definition

            Clarifies whether a tests for chromosome translocations is performed

            ShortIs a tests for chromosome translocations performed ?
            Control0..1
            Typeboolean
            Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
            Obligations
              ObligationsActor
              SHALL:handle
              14. GeneticTestExpression.dateOfTraslocation
              Definition

              Date of the Chromosome translocation test

              ShortDate of the Chromosome translocation test
              Control0..1
              Typedate
              Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
              Obligations
                ObligationsActor
                SHALL:handle
                16. GeneticTestExpression.ngsPerformed
                Definition

                Clarifies whether a NGS analysis is performed

                ShortIs a NGS analysis performed ?
                Control0..1
                Typeboolean
                Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                Obligations
                  ObligationsActor
                  SHALL:handle
                  18. GeneticTestExpression.dateOfNgs
                  Definition

                  Date of the NGS analysis

                  ShortDate of the NGS analysis
                  Control0..1
                  Typedate
                  Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                  Obligations
                    ObligationsActor
                    SHALL:handle
                    20. GeneticTestExpression.pcrTestPerformed
                    Definition

                    Clarifies whether a PCR analysis is performed

                    ShortIs a PCR analysis performed ?
                    Control0..1
                    Typeboolean
                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                    Obligations
                      ObligationsActor
                      SHALL:handle
                      22. GeneticTestExpression.dateOfPcr
                      Definition

                      Date of the PCR analysis

                      ShortDate of the PCR analysis
                      Control0..1
                      Typedate
                      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                      Obligations
                        ObligationsActor
                        SHALL:handle
                        24. GeneticTestExpression.immunohistochemistryPerformed
                        Definition

                        Clarifies whether a immunohiostochemestry analysis is performed

                        ShortIs a immunohiostochemestry analysis performed ?
                        Control0..1
                        Typeboolean
                        Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                        Obligations
                          ObligationsActor
                          SHALL:handle
                          26. GeneticTestExpression.dateOfImmunohistochemistry
                          Definition

                          Date of the immunohiostochemestry analysis

                          ShortDate of the immunohiostochemestry analysis
                          Control0..1
                          Typedate
                          Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                          Obligations
                            ObligationsActor
                            SHALL:handle
                            28. GeneticTestExpression.ctDnaPerformed
                            Definition

                            Clarifies whether a ctDNA analysis is performed

                            ShortIs a ctDNA analysis performed ?
                            Control0..1
                            Typeboolean
                            Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                            Obligations
                              ObligationsActor
                              SHALL:handle
                              30. GeneticTestExpression.dateOfCtdna
                              Definition

                              Date of the ctDNA analysis

                              ShortDate of the ctDNA analysis
                              Control0..1
                              Typedate
                              Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                              Obligations
                                ObligationsActor
                                SHALL:handle

                                Guidance on how to interpret the contents of this table can be found here

                                0. GeneticTestExpression
                                Definition

                                Genetic Test Expression

                                ShortGenetic Test Expression
                                Control0..*
                                Is Modifierfalse
                                Logical ModelInstances of this logical model are not marked to be the target of a Reference
                                2. GeneticTestExpression.episodeEventReference
                                Definition

                                EpisodeEvent element containing the data regarding the patient's cancer

                                ShortCancer Episode Reference
                                Control1..1
                                Typehttp://hl7.eu/fhir/ig/idea4rc/StructureDefinition/EpisodeEvent
                                Obligations
                                  ObligationsActor
                                  SHALL:handle
                                  4. GeneticTestExpression.geneExpressionAnalysisPerformed
                                  Definition

                                  Clarifies whether a gene expression analysis is performed

                                  ShortIs a gene expression analysis performed ?
                                  Control0..1
                                  Typeboolean
                                  Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                  Obligations
                                    ObligationsActor
                                    SHALL:handle
                                    6. GeneticTestExpression.dateOfGeneExpression
                                    Definition

                                    Date of the gene expression analysis

                                    ShortDate of the gene expression analysis
                                    Control0..1
                                    Typedate
                                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                    Obligations
                                      ObligationsActor
                                      SHALL:handle
                                      8. GeneticTestExpression.geneMutationAnalysisPerformed
                                      Definition

                                      Clarifies whether a gene mutation analysis is performed

                                      ShortIs a gene mutation analysis performed ?
                                      Control0..1
                                      Typeboolean
                                      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                      Obligations
                                        ObligationsActor
                                        SHALL:handle
                                        10. GeneticTestExpression.dateOfGeneMutation
                                        Definition

                                        Date of the gene mutation analysis

                                        ShortDate of the gene mutation analysis
                                        Control0..1
                                        Typedate
                                        Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                        Obligations
                                          ObligationsActor
                                          SHALL:handle
                                          12. GeneticTestExpression.testsForChromosomeTranslocationsPerformed
                                          Definition

                                          Clarifies whether a tests for chromosome translocations is performed

                                          ShortIs a tests for chromosome translocations performed ?
                                          Control0..1
                                          Typeboolean
                                          Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                          Obligations
                                            ObligationsActor
                                            SHALL:handle
                                            14. GeneticTestExpression.dateOfTraslocation
                                            Definition

                                            Date of the Chromosome translocation test

                                            ShortDate of the Chromosome translocation test
                                            Control0..1
                                            Typedate
                                            Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                            Obligations
                                              ObligationsActor
                                              SHALL:handle
                                              16. GeneticTestExpression.ngsPerformed
                                              Definition

                                              Clarifies whether a NGS analysis is performed

                                              ShortIs a NGS analysis performed ?
                                              Control0..1
                                              Typeboolean
                                              Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                              Obligations
                                                ObligationsActor
                                                SHALL:handle
                                                18. GeneticTestExpression.dateOfNgs
                                                Definition

                                                Date of the NGS analysis

                                                ShortDate of the NGS analysis
                                                Control0..1
                                                Typedate
                                                Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                Obligations
                                                  ObligationsActor
                                                  SHALL:handle
                                                  20. GeneticTestExpression.pcrTestPerformed
                                                  Definition

                                                  Clarifies whether a PCR analysis is performed

                                                  ShortIs a PCR analysis performed ?
                                                  Control0..1
                                                  Typeboolean
                                                  Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                  Obligations
                                                    ObligationsActor
                                                    SHALL:handle
                                                    22. GeneticTestExpression.dateOfPcr
                                                    Definition

                                                    Date of the PCR analysis

                                                    ShortDate of the PCR analysis
                                                    Control0..1
                                                    Typedate
                                                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                    Obligations
                                                      ObligationsActor
                                                      SHALL:handle
                                                      24. GeneticTestExpression.immunohistochemistryPerformed
                                                      Definition

                                                      Clarifies whether a immunohiostochemestry analysis is performed

                                                      ShortIs a immunohiostochemestry analysis performed ?
                                                      Control0..1
                                                      Typeboolean
                                                      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                      Obligations
                                                        ObligationsActor
                                                        SHALL:handle
                                                        26. GeneticTestExpression.dateOfImmunohistochemistry
                                                        Definition

                                                        Date of the immunohiostochemestry analysis

                                                        ShortDate of the immunohiostochemestry analysis
                                                        Control0..1
                                                        Typedate
                                                        Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                        Obligations
                                                          ObligationsActor
                                                          SHALL:handle
                                                          28. GeneticTestExpression.ctDnaPerformed
                                                          Definition

                                                          Clarifies whether a ctDNA analysis is performed

                                                          ShortIs a ctDNA analysis performed ?
                                                          Control0..1
                                                          Typeboolean
                                                          Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                          Obligations
                                                            ObligationsActor
                                                            SHALL:handle
                                                            30. GeneticTestExpression.dateOfCtdna
                                                            Definition

                                                            Date of the ctDNA analysis

                                                            ShortDate of the ctDNA analysis
                                                            Control0..1
                                                            Typedate
                                                            Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                            Obligations
                                                              ObligationsActor
                                                              SHALL:handle

                                                              Guidance on how to interpret the contents of this table can be found here

                                                              0. GeneticTestExpression
                                                              Definition

                                                              Genetic Test Expression

                                                              ShortGenetic Test Expression
                                                              Control0..*
                                                              Is Modifierfalse
                                                              Logical ModelInstances of this logical model are not marked to be the target of a Reference
                                                              2. GeneticTestExpression.episodeEventReference
                                                              Definition

                                                              EpisodeEvent element containing the data regarding the patient's cancer

                                                              ShortCancer Episode Reference
                                                              Control1..1
                                                              Typehttp://hl7.eu/fhir/ig/idea4rc/StructureDefinition/EpisodeEvent
                                                              Obligations
                                                                ObligationsActor
                                                                SHALL:handle
                                                                4. GeneticTestExpression.geneExpressionAnalysisPerformed
                                                                Definition

                                                                Clarifies whether a gene expression analysis is performed

                                                                ShortIs a gene expression analysis performed ?
                                                                Control0..1
                                                                Typeboolean
                                                                Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                Obligations
                                                                  ObligationsActor
                                                                  SHALL:handle
                                                                  6. GeneticTestExpression.dateOfGeneExpression
                                                                  Definition

                                                                  Date of the gene expression analysis

                                                                  ShortDate of the gene expression analysis
                                                                  Control0..1
                                                                  Typedate
                                                                  Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                  Obligations
                                                                    ObligationsActor
                                                                    SHALL:handle
                                                                    8. GeneticTestExpression.geneMutationAnalysisPerformed
                                                                    Definition

                                                                    Clarifies whether a gene mutation analysis is performed

                                                                    ShortIs a gene mutation analysis performed ?
                                                                    Control0..1
                                                                    Typeboolean
                                                                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                    Obligations
                                                                      ObligationsActor
                                                                      SHALL:handle
                                                                      10. GeneticTestExpression.dateOfGeneMutation
                                                                      Definition

                                                                      Date of the gene mutation analysis

                                                                      ShortDate of the gene mutation analysis
                                                                      Control0..1
                                                                      Typedate
                                                                      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                      Obligations
                                                                        ObligationsActor
                                                                        SHALL:handle
                                                                        12. GeneticTestExpression.testsForChromosomeTranslocationsPerformed
                                                                        Definition

                                                                        Clarifies whether a tests for chromosome translocations is performed

                                                                        ShortIs a tests for chromosome translocations performed ?
                                                                        Control0..1
                                                                        Typeboolean
                                                                        Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                        Obligations
                                                                          ObligationsActor
                                                                          SHALL:handle
                                                                          14. GeneticTestExpression.dateOfTraslocation
                                                                          Definition

                                                                          Date of the Chromosome translocation test

                                                                          ShortDate of the Chromosome translocation test
                                                                          Control0..1
                                                                          Typedate
                                                                          Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                          Obligations
                                                                            ObligationsActor
                                                                            SHALL:handle
                                                                            16. GeneticTestExpression.ngsPerformed
                                                                            Definition

                                                                            Clarifies whether a NGS analysis is performed

                                                                            ShortIs a NGS analysis performed ?
                                                                            Control0..1
                                                                            Typeboolean
                                                                            Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                            Obligations
                                                                              ObligationsActor
                                                                              SHALL:handle
                                                                              18. GeneticTestExpression.dateOfNgs
                                                                              Definition

                                                                              Date of the NGS analysis

                                                                              ShortDate of the NGS analysis
                                                                              Control0..1
                                                                              Typedate
                                                                              Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                              Obligations
                                                                                ObligationsActor
                                                                                SHALL:handle
                                                                                20. GeneticTestExpression.pcrTestPerformed
                                                                                Definition

                                                                                Clarifies whether a PCR analysis is performed

                                                                                ShortIs a PCR analysis performed ?
                                                                                Control0..1
                                                                                Typeboolean
                                                                                Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                                Obligations
                                                                                  ObligationsActor
                                                                                  SHALL:handle
                                                                                  22. GeneticTestExpression.dateOfPcr
                                                                                  Definition

                                                                                  Date of the PCR analysis

                                                                                  ShortDate of the PCR analysis
                                                                                  Control0..1
                                                                                  Typedate
                                                                                  Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                                  Obligations
                                                                                    ObligationsActor
                                                                                    SHALL:handle
                                                                                    24. GeneticTestExpression.immunohistochemistryPerformed
                                                                                    Definition

                                                                                    Clarifies whether a immunohiostochemestry analysis is performed

                                                                                    ShortIs a immunohiostochemestry analysis performed ?
                                                                                    Control0..1
                                                                                    Typeboolean
                                                                                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                                    Obligations
                                                                                      ObligationsActor
                                                                                      SHALL:handle
                                                                                      26. GeneticTestExpression.dateOfImmunohistochemistry
                                                                                      Definition

                                                                                      Date of the immunohiostochemestry analysis

                                                                                      ShortDate of the immunohiostochemestry analysis
                                                                                      Control0..1
                                                                                      Typedate
                                                                                      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                                      Obligations
                                                                                        ObligationsActor
                                                                                        SHALL:handle
                                                                                        28. GeneticTestExpression.ctDnaPerformed
                                                                                        Definition

                                                                                        Clarifies whether a ctDNA analysis is performed

                                                                                        ShortIs a ctDNA analysis performed ?
                                                                                        Control0..1
                                                                                        Typeboolean
                                                                                        Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                                        Obligations
                                                                                          ObligationsActor
                                                                                          SHALL:handle
                                                                                          30. GeneticTestExpression.dateOfCtdna
                                                                                          Definition

                                                                                          Date of the ctDNA analysis

                                                                                          ShortDate of the ctDNA analysis
                                                                                          Control0..1
                                                                                          Typedate
                                                                                          Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                                                                                          Obligations
                                                                                            ObligationsActor
                                                                                            SHALL:handle