IDEA4RC FHIR Implementation Guide
0.1.0 - CI Build
150
IDEA4RC FHIR Implementation Guide
0.1.0 - CI Build
150
IDEA4RC FHIR Implementation Guide, published by IDEA4RC Project. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/idea4rc/ and changes regularly. See the Directory of published versions
| Draft as of 2025-01-13 |
Definitions for the GeneticTestExpression logical model.
Guidance on how to interpret the contents of this table can be found here
| 0. GeneticTestExpression | |||||
| Definition | Genetic Test Expression Maturity Level: 0 Draft | ||||
| Short | Genetic Test Expression | ||||
| Control | 0..* | ||||
| Is Modifier | false | ||||
| Logical Model | Instances of this logical model are not marked to be the target of a Reference | ||||
| 2. GeneticTestExpression.diagnosisReference | |||||
| Definition | Diagnosis reference in case the treatment was done for baseline | ||||
| Short | Diagnosis reference (M) | ||||
| Control | 1..* | ||||
| Type | http://hl7.eu/fhir/ig/idea4rc/StructureDefinition/Diagnosis | ||||
| Obligations |
| ||||
| 4. GeneticTestExpression.episodeEvent | |||||
| Definition | EpisodeEvent element containing the data regarding the patient's cancer | ||||
| Short | Episode Event Reference (M) | ||||
| Control | 1..* | ||||
| Type | http://hl7.eu/fhir/ig/idea4rc/StructureDefinition/EpisodeEvent | ||||
| Obligations |
| ||||
| 6. GeneticTestExpression.geneExpressionAnalysisPerformed | |||||
| Definition | Clarifies whether a gene expression analysis is performed | ||||
| Short | Gene expression analysis performed (R) | ||||
| Comments | Gene expression assay - 44808037 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 8. GeneticTestExpression.dateOfGeneExpression | |||||
| Definition | Date of the gene expression analysis | ||||
| Short | Date of Gene expression (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 10. GeneticTestExpression.geneMutationAnalysisPerformed | |||||
| Definition | Clarifies whether a gene mutation analysis is performed | ||||
| Short | Gene mutation analysis performed (R) | ||||
| Comments | Gene mutation analysis - 4038339 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 12. GeneticTestExpression.dateOfGeneMutation | |||||
| Definition | Date of the gene mutation analysis | ||||
| Short | Date of Gene mutation (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 14. GeneticTestExpression.testsForChromosomeTranslocationsPerformed | |||||
| Definition | Clarifies whether a tests for chromosome translocations is performed | ||||
| Short | Tests for chromosome translocations performed (R) | ||||
| Comments | Translocation analysis - 4039364 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 16. GeneticTestExpression.dateOfTraslocation | |||||
| Definition | Date of the Chromosome translocation test | ||||
| Short | Date of traslocation (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 18. GeneticTestExpression.ngsPerformed | |||||
| Definition | Clarifies whether a NGS analysis is performed | ||||
| Short | Next generation sequencing (NGS) performed (R) | ||||
| Comments | Analysis using chain termination sequencing technique - 40485067 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 20. GeneticTestExpression.dateOfNgs | |||||
| Definition | Date of the NGS analysis | ||||
| Short | Date of NGS (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 22. GeneticTestExpression.pcrPerformed | |||||
| Definition | Clarifies whether a PCR analysis is performed | ||||
| Short | Polymerase chain reaction (PCR) test performed (R) | ||||
| Comments | Quantitative PCR analysis - 40482792 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 24. GeneticTestExpression.dateOfPcr | |||||
| Definition | Date of the PCR analysis | ||||
| Short | Date of PCR (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 26. GeneticTestExpression.immunohistochemistryPerformed | |||||
| Definition | Clarifies whether a immunohiostochemestry analysis is performed | ||||
| Short | Immunohistochemistry performed (R) | ||||
| Comments | Immunohistochemistry procedure - 4035726 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 28. GeneticTestExpression.dateOfImmunohistochemistry | |||||
| Definition | Date of the immunohiostochemestry analysis | ||||
| Short | Date of immunohistochemistry (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 30. GeneticTestExpression.ctdnaPerformed | |||||
| Definition | Clarifies whether a ctDNA analysis is performed | ||||
| Short | Circulating Tumour DNA (ctDNA) performed (R) | ||||
| Comments | Circulating Tumor DNA - 19387013 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 32. GeneticTestExpression.dateOfCtdna | |||||
| Definition | Date of the ctDNA analysis | ||||
| Short | Date of ctDNA (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
Guidance on how to interpret the contents of this table can be found here
| 0. GeneticTestExpression | |||||
| Definition | Genetic Test Expression Maturity Level: 0 Draft | ||||
| Short | Genetic Test Expression | ||||
| Logical Model | Instances of this logical model are not marked to be the target of a Reference | ||||
| 2. GeneticTestExpression.diagnosisReference | |||||
| Definition | Diagnosis reference in case the treatment was done for baseline | ||||
| Short | Diagnosis reference (M) | ||||
| Control | 1..* | ||||
| Type | http://hl7.eu/fhir/ig/idea4rc/StructureDefinition/Diagnosis | ||||
| Obligations |
| ||||
| 4. GeneticTestExpression.episodeEvent | |||||
| Definition | EpisodeEvent element containing the data regarding the patient's cancer | ||||
| Short | Episode Event Reference (M) | ||||
| Control | 1..* | ||||
| Type | http://hl7.eu/fhir/ig/idea4rc/StructureDefinition/EpisodeEvent | ||||
| Obligations |
| ||||
| 6. GeneticTestExpression.geneExpressionAnalysisPerformed | |||||
| Definition | Clarifies whether a gene expression analysis is performed | ||||
| Short | Gene expression analysis performed (R) | ||||
| Comments | Gene expression assay - 44808037 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 8. GeneticTestExpression.dateOfGeneExpression | |||||
| Definition | Date of the gene expression analysis | ||||
| Short | Date of Gene expression (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 10. GeneticTestExpression.geneMutationAnalysisPerformed | |||||
| Definition | Clarifies whether a gene mutation analysis is performed | ||||
| Short | Gene mutation analysis performed (R) | ||||
| Comments | Gene mutation analysis - 4038339 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 12. GeneticTestExpression.dateOfGeneMutation | |||||
| Definition | Date of the gene mutation analysis | ||||
| Short | Date of Gene mutation (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 14. GeneticTestExpression.testsForChromosomeTranslocationsPerformed | |||||
| Definition | Clarifies whether a tests for chromosome translocations is performed | ||||
| Short | Tests for chromosome translocations performed (R) | ||||
| Comments | Translocation analysis - 4039364 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 16. GeneticTestExpression.dateOfTraslocation | |||||
| Definition | Date of the Chromosome translocation test | ||||
| Short | Date of traslocation (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 18. GeneticTestExpression.ngsPerformed | |||||
| Definition | Clarifies whether a NGS analysis is performed | ||||
| Short | Next generation sequencing (NGS) performed (R) | ||||
| Comments | Analysis using chain termination sequencing technique - 40485067 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 20. GeneticTestExpression.dateOfNgs | |||||
| Definition | Date of the NGS analysis | ||||
| Short | Date of NGS (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 22. GeneticTestExpression.pcrPerformed | |||||
| Definition | Clarifies whether a PCR analysis is performed | ||||
| Short | Polymerase chain reaction (PCR) test performed (R) | ||||
| Comments | Quantitative PCR analysis - 40482792 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 24. GeneticTestExpression.dateOfPcr | |||||
| Definition | Date of the PCR analysis | ||||
| Short | Date of PCR (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 26. GeneticTestExpression.immunohistochemistryPerformed | |||||
| Definition | Clarifies whether a immunohiostochemestry analysis is performed | ||||
| Short | Immunohistochemistry performed (R) | ||||
| Comments | Immunohistochemistry procedure - 4035726 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 28. GeneticTestExpression.dateOfImmunohistochemistry | |||||
| Definition | Date of the immunohiostochemestry analysis | ||||
| Short | Date of immunohistochemistry (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 30. GeneticTestExpression.ctdnaPerformed | |||||
| Definition | Clarifies whether a ctDNA analysis is performed | ||||
| Short | Circulating Tumour DNA (ctDNA) performed (R) | ||||
| Comments | Circulating Tumor DNA - 19387013 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 32. GeneticTestExpression.dateOfCtdna | |||||
| Definition | Date of the ctDNA analysis | ||||
| Short | Date of ctDNA (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
Guidance on how to interpret the contents of this table can be found here
| 0. GeneticTestExpression | |||||
| Definition | Genetic Test Expression Maturity Level: 0 Draft | ||||
| Short | Genetic Test Expression | ||||
| Control | 0..* | ||||
| Is Modifier | false | ||||
| Logical Model | Instances of this logical model are not marked to be the target of a Reference | ||||
| 2. GeneticTestExpression.diagnosisReference | |||||
| Definition | Diagnosis reference in case the treatment was done for baseline | ||||
| Short | Diagnosis reference (M) | ||||
| Control | 1..* | ||||
| Type | http://hl7.eu/fhir/ig/idea4rc/StructureDefinition/Diagnosis | ||||
| Obligations |
| ||||
| 4. GeneticTestExpression.episodeEvent | |||||
| Definition | EpisodeEvent element containing the data regarding the patient's cancer | ||||
| Short | Episode Event Reference (M) | ||||
| Control | 1..* | ||||
| Type | http://hl7.eu/fhir/ig/idea4rc/StructureDefinition/EpisodeEvent | ||||
| Obligations |
| ||||
| 6. GeneticTestExpression.geneExpressionAnalysisPerformed | |||||
| Definition | Clarifies whether a gene expression analysis is performed | ||||
| Short | Gene expression analysis performed (R) | ||||
| Comments | Gene expression assay - 44808037 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 8. GeneticTestExpression.dateOfGeneExpression | |||||
| Definition | Date of the gene expression analysis | ||||
| Short | Date of Gene expression (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 10. GeneticTestExpression.geneMutationAnalysisPerformed | |||||
| Definition | Clarifies whether a gene mutation analysis is performed | ||||
| Short | Gene mutation analysis performed (R) | ||||
| Comments | Gene mutation analysis - 4038339 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 12. GeneticTestExpression.dateOfGeneMutation | |||||
| Definition | Date of the gene mutation analysis | ||||
| Short | Date of Gene mutation (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 14. GeneticTestExpression.testsForChromosomeTranslocationsPerformed | |||||
| Definition | Clarifies whether a tests for chromosome translocations is performed | ||||
| Short | Tests for chromosome translocations performed (R) | ||||
| Comments | Translocation analysis - 4039364 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 16. GeneticTestExpression.dateOfTraslocation | |||||
| Definition | Date of the Chromosome translocation test | ||||
| Short | Date of traslocation (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 18. GeneticTestExpression.ngsPerformed | |||||
| Definition | Clarifies whether a NGS analysis is performed | ||||
| Short | Next generation sequencing (NGS) performed (R) | ||||
| Comments | Analysis using chain termination sequencing technique - 40485067 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 20. GeneticTestExpression.dateOfNgs | |||||
| Definition | Date of the NGS analysis | ||||
| Short | Date of NGS (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 22. GeneticTestExpression.pcrPerformed | |||||
| Definition | Clarifies whether a PCR analysis is performed | ||||
| Short | Polymerase chain reaction (PCR) test performed (R) | ||||
| Comments | Quantitative PCR analysis - 40482792 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 24. GeneticTestExpression.dateOfPcr | |||||
| Definition | Date of the PCR analysis | ||||
| Short | Date of PCR (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 26. GeneticTestExpression.immunohistochemistryPerformed | |||||
| Definition | Clarifies whether a immunohiostochemestry analysis is performed | ||||
| Short | Immunohistochemistry performed (R) | ||||
| Comments | Immunohistochemistry procedure - 4035726 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 28. GeneticTestExpression.dateOfImmunohistochemistry | |||||
| Definition | Date of the immunohiostochemestry analysis | ||||
| Short | Date of immunohistochemistry (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 30. GeneticTestExpression.ctdnaPerformed | |||||
| Definition | Clarifies whether a ctDNA analysis is performed | ||||
| Short | Circulating Tumour DNA (ctDNA) performed (R) | ||||
| Comments | Circulating Tumor DNA - 19387013 | ||||
| Control | 0..* | ||||
| Type | boolean | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
| 32. GeneticTestExpression.dateOfCtdna | |||||
| Definition | Date of the ctDNA analysis | ||||
| Short | Date of ctDNA (O) | ||||
| Control | 0..* | ||||
| Type | date | ||||
| Primitive Value | This primitive element may be present, or absent, or replaced by an extension | ||||
| Obligations |
| ||||
IG © 2022+ IDEA4RC Project. Package hl7.eu.fhir.idea4rc#0.1.0 based on FHIR 4.0.1. Generated 2025-01-13
Links: Table of Contents |
QA Report
The IDEA4RC project has received funding from the European Union's Horizon 2020
research and innovation programme under grant agreement No. 101057048.
