0.1.0 - ci-build

RuSEMD, published by HL7 FHIR Россия. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/fhir-ru/Ru-SEMD/ and changes regularly. See the Directory of published versions

Resource Profile: PLI SEMD Specimen (Образец ПЛИ)

Official URL: https://fhir.ru/ig/semd/StructureDefinition/pli-semd-specimen Version: 0.1.0
Active as of 2025-07-15 Computable Name: PLI_SEMD_Specimen

Профиль Specimen для протокола лабораторного исследования

Usages:

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* Specimen Sample for analysis
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... contained 0..* Resource Contained, inline Resources
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
.... identifier:specimenId Σ 1..1 Identifier Идентификатор материала исследования
..... use ?!Σ 0..1 code usual | official | temp | secondary | old (If known)
Binding: IdentifierUse (required): Identifies the purpose for this identifier, if known .
..... type Σ 1..1 CodeableConcept Description of identifier
Binding: IdentifierTypeCodes (extensible): A coded type for an identifier that can be used to determine which identifier to use for a specific purpose.
Required Pattern: At least the following
...... id 0..1 string Unique id for inter-element referencing
...... extension 0..* Extension Additional content defined by implementations
...... coding 1..* Coding Code defined by a terminology system
Fixed Value: (complex)
....... id 0..1 string Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
....... system 1..1 uri Identity of the terminology system
Fixed Value: http://terminology.hl7.org/CodeSystem/v2-0203
....... version 0..1 string Version of the system - if relevant
....... code 1..1 code Symbol in syntax defined by the system
Fixed Value: ACSN
....... display 0..1 string Representation defined by the system
....... userSelected 0..1 boolean If this coding was chosen directly by the user
...... text 0..1 string Plain text representation of the concept
..... system Σ 1..1 uri The namespace for the identifier value
Required Pattern: https://fhir.ru/ig/semd/systems/specimen
... status ?!Σ 0..1 code available | unavailable | unsatisfactory | entered-in-error
Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
... type SΣ 0..1 CodeableConcept Тип материала исследования
Binding: Типы материалов исследования (required)
... collection S 1..1 BackboneElement Сведения о заборе материала
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... collector SΣ 0..1 Reference(SEMD PractitionerRole (Роль медицинского работника СЭМД)) Сборщик материала
.... quantity S 0..1 SimpleQuantity Количество материала
..... unit Σ 0..1 string Unit representation
Binding: Единицы измерения (required)
..... system ΣC 0..1 uri System that defines coded unit form
Binding: Единицы измерения (required)
..... code ΣC 0..1 code Coded form of the unit
Binding: Единицы измерения (required)

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet / CodeURI
Specimen.identifier:specimenId.userequiredIdentifierUse
http://hl7.org/fhir/ValueSet/identifier-use|5.0.0
From the FHIR Standard
Specimen.identifier:specimenId.typeextensiblePattern Value: ACSN
http://hl7.org/fhir/ValueSet/identifier-type
From the FHIR Standard
Specimen.statusrequiredSpecimenStatus
http://hl7.org/fhir/ValueSet/specimen-status|5.0.0
From the FHIR Standard
Specimen.typerequiredPLI_Vs_Nsi_Specimen_Types(a valid code from urn:oid:1.2.643.5.1.13.13.99.2.1019)
https://fhir.ru/ig/semd/ValueSet/pli-vs-nsi-specimen-types
From this IG
Specimen.collection.quantity.unitrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.systemrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.coderequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG

Constraints

IdGradePath(s)DetailsRequirements
dom-2errorSpecimenIf the resource is contained in another resource, it SHALL NOT contain nested Resources
: contained.contained.empty()
dom-3errorSpecimenIf the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource
: contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated
: contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a security label
: contained.meta.security.empty()
dom-6best practiceSpecimenA resource should have narrative for robust management
: text.`div`.exists()
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

This structure is derived from Specimen

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen Specimen
... Slices for identifier 1..* Identifier External Identifier
Slice: Unordered, Open by value:system
.... identifier:specimenId 1..1 Identifier Идентификатор материала исследования
..... type 1..1 CodeableConcept Description of identifier
Required Pattern: At least the following
...... coding 1..* Coding Code defined by a terminology system
Fixed Value: (complex)
....... system 1..1 uri Identity of the terminology system
Fixed Value: http://terminology.hl7.org/CodeSystem/v2-0203
....... code 1..1 code Symbol in syntax defined by the system
Fixed Value: ACSN
..... system 1..1 uri The namespace for the identifier value
Required Pattern: https://fhir.ru/ig/semd/systems/specimen
... type S 0..1 CodeableConcept Тип материала исследования
Binding: Типы материалов исследования (required)
... collection S 1..1 BackboneElement Сведения о заборе материала
.... collector S 0..1 Reference(SEMD PractitionerRole (Роль медицинского работника СЭМД)) Сборщик материала
.... quantity S 0..1 SimpleQuantity Количество материала
..... unit 0..1 string Unit representation
Binding: Единицы измерения (required)
..... system 0..1 uri System that defines coded unit form
Binding: Единицы измерения (required)
..... code 0..1 code Coded form of the unit
Binding: Единицы измерения (required)

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSetURI
Specimen.typerequiredPLI_Vs_Nsi_Specimen_Types(a valid code from urn:oid:1.2.643.5.1.13.13.99.2.1019)
https://fhir.ru/ig/semd/ValueSet/pli-vs-nsi-specimen-types
From this IG
Specimen.collection.quantity.unitrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.systemrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.coderequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* Specimen Sample for analysis
... id Σ 0..1 id Logical id of this artifact
... meta Σ 0..1 Meta Metadata about the resource
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... text 0..1 Narrative Text summary of the resource, for human interpretation
This profile does not constrain the narrative in regard to content, language, or traceability to data elements
... contained 0..* Resource Contained, inline Resources
... extension 0..* Extension Additional content defined by implementations
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
... Slices for identifier Σ 1..* Identifier External Identifier
Slice: Unordered, Open by value:system
.... identifier:specimenId Σ 1..1 Identifier Идентификатор материала исследования
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
..... use ?!Σ 0..1 code usual | official | temp | secondary | old (If known)
Binding: IdentifierUse (required): Identifies the purpose for this identifier, if known .
..... type Σ 1..1 CodeableConcept Description of identifier
Binding: IdentifierTypeCodes (extensible): A coded type for an identifier that can be used to determine which identifier to use for a specific purpose.
Required Pattern: At least the following
...... id 0..1 string Unique id for inter-element referencing
...... extension 0..* Extension Additional content defined by implementations
...... coding 1..* Coding Code defined by a terminology system
Fixed Value: (complex)
....... id 0..1 string Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
....... system 1..1 uri Identity of the terminology system
Fixed Value: http://terminology.hl7.org/CodeSystem/v2-0203
....... version 0..1 string Version of the system - if relevant
....... code 1..1 code Symbol in syntax defined by the system
Fixed Value: ACSN
....... display 0..1 string Representation defined by the system
....... userSelected 0..1 boolean If this coding was chosen directly by the user
...... text 0..1 string Plain text representation of the concept
..... system Σ 1..1 uri The namespace for the identifier value
Required Pattern: https://fhir.ru/ig/semd/systems/specimen
..... value ΣC 0..1 string The value that is unique
Example General: 123456
..... period Σ 0..1 Period Time period when id is/was valid for use
..... assigner Σ 0..1 Reference(Organization) Organization that issued id (may be just text)
... accessionIdentifier Σ 0..1 Identifier Identifier assigned by the lab
... status ?!Σ 0..1 code available | unavailable | unsatisfactory | entered-in-error
Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
... type SΣ 0..1 CodeableConcept Тип материала исследования
Binding: Типы материалов исследования (required)
... subject Σ 0..1 Reference(Patient | Group | Device | BiologicallyDerivedProduct | Substance | Location) Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance, a biologically-derived product, or a device
... receivedTime Σ 0..1 dateTime The time when specimen is received by the testing laboratory
... parent 0..* Reference(Specimen) Specimen from which this specimen originated
... request 0..* Reference(ServiceRequest) Why the specimen was collected
... combined Σ 0..1 code grouped | pooled
Binding: SpecimenCombined (required): Codes for the combined status of a specimen.
... role 0..* CodeableConcept The role the specimen serves
Binding: SpecimenRole (preferred): Codes describing specimen role.
... feature 0..* BackboneElement The physical feature of a specimen
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... type 1..1 CodeableConcept Highlighted feature
Binding: SNOMEDCTBodyStructures (example): SNOMED CT Body site concepts
.... description 1..1 string Information about the feature
... collection S 1..1 BackboneElement Сведения о заборе материала
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... collector SΣ 0..1 Reference(SEMD PractitionerRole (Роль медицинского работника СЭМД)) Сборщик материала
.... collected[x] Σ 0..1 Collection time
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration Σ 0..1 Duration How long it took to collect specimen
.... quantity S 0..1 SimpleQuantity Количество материала
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
..... value Σ 0..1 decimal Numerical value (with implicit precision)
..... unit Σ 0..1 string Unit representation
Binding: Единицы измерения (required)
..... system ΣC 0..1 uri System that defines coded unit form
Binding: Единицы измерения (required)
..... code ΣC 0..1 code Coded form of the unit
Binding: Единицы измерения (required)
.... method 0..1 CodeableConcept Technique used to perform collection
Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure.
.... device 0..1 CodeableReference(Device) Device used to perform collection
Binding Description: (example): The device that was used to obtain the specimen (e.g. a catheter or catheter part used to draw the blood via a central line).
.... procedure 0..1 Reference(Procedure) The procedure that collects the specimen
.... bodySite 0..1 CodeableReference(BodyStructure) Anatomical collection site
Binding: SNOMEDCTBodyStructures (example): SNOMED CT Body site concepts
.... fastingStatus[x] Σ 0..1 Whether or how long patient abstained from food and/or drink
Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient.
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration
... processing 0..* BackboneElement Processing and processing step details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... description 0..1 string Textual description of procedure
.... method 0..1 CodeableConcept Indicates the treatment step applied to the specimen
Binding: SpecimenProcessingMethod (example): Type indicating the technique used to process the specimen.
.... additive 0..* Reference(Substance) Material used in the processing step
.... time[x] 0..1 Date and time of specimen processing
..... timeDateTime dateTime
..... timePeriod Period
... container 0..* BackboneElement Direct container of specimen (tube/slide, etc.)
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... device 1..1 Reference(Device) Device resource for the container
.... location 0..1 Reference(Location) Where the container is
.... specimenQuantity 0..1 SimpleQuantity Quantity of specimen within container
... condition Σ 0..* CodeableConcept State of the specimen
Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
... note 0..* Annotation Comments

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet / CodeURI
Specimen.languagerequiredAllLanguages
http://hl7.org/fhir/ValueSet/all-languages|5.0.0
From the FHIR Standard
Specimen.identifier:specimenId.userequiredIdentifierUse
http://hl7.org/fhir/ValueSet/identifier-use|5.0.0
From the FHIR Standard
Specimen.identifier:specimenId.typeextensiblePattern Value: ACSN
http://hl7.org/fhir/ValueSet/identifier-type
From the FHIR Standard
Specimen.statusrequiredSpecimenStatus
http://hl7.org/fhir/ValueSet/specimen-status|5.0.0
From the FHIR Standard
Specimen.typerequiredPLI_Vs_Nsi_Specimen_Types(a valid code from urn:oid:1.2.643.5.1.13.13.99.2.1019)
https://fhir.ru/ig/semd/ValueSet/pli-vs-nsi-specimen-types
From this IG
Specimen.combinedrequiredSpecimenCombined
http://hl7.org/fhir/ValueSet/specimen-combined|5.0.0
From the FHIR Standard
Specimen.rolepreferredSpecimenRole
http://hl7.org/fhir/ValueSet/specimen-role
From the FHIR Standard
Specimen.feature.typeexampleSNOMEDCTBodyStructures
http://hl7.org/fhir/ValueSet/body-site
From the FHIR Standard
Specimen.collection.quantity.unitrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.systemrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.coderequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.methodexampleFHIRSpecimenCollectionMethod
http://hl7.org/fhir/ValueSet/specimen-collection-method
From the FHIR Standard
Specimen.collection.deviceexample
Specimen.collection.bodySiteexampleSNOMEDCTBodyStructures
http://hl7.org/fhir/ValueSet/body-site
From the FHIR Standard
Specimen.collection.fastingStatus[x]extensibleHl7VSRelevantClincialInformation
http://terminology.hl7.org/ValueSet/v2-0916
Specimen.processing.methodexampleSpecimenProcessingMethod
http://hl7.org/fhir/ValueSet/specimen-processing-method
From the FHIR Standard
Specimen.conditionextensibleHl7VSSpecimenCondition
http://terminology.hl7.org/ValueSet/v2-0493

Constraints

IdGradePath(s)DetailsRequirements
dom-2errorSpecimenIf the resource is contained in another resource, it SHALL NOT contain nested Resources
: contained.contained.empty()
dom-3errorSpecimenIf the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource
: contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated
: contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a security label
: contained.meta.security.empty()
dom-6best practiceSpecimenA resource should have narrative for robust management
: text.`div`.exists()
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

This structure is derived from Specimen

Summary

Mandatory: 5 elements
Must-Support: 4 elements

Structures

This structure refers to these other structures:

Slices

This structure defines the following Slices:

  • The element 1 is sliced based on the value of Specimen.identifier

Key Elements View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* Specimen Sample for analysis
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... contained 0..* Resource Contained, inline Resources
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
.... identifier:specimenId Σ 1..1 Identifier Идентификатор материала исследования
..... use ?!Σ 0..1 code usual | official | temp | secondary | old (If known)
Binding: IdentifierUse (required): Identifies the purpose for this identifier, if known .
..... type Σ 1..1 CodeableConcept Description of identifier
Binding: IdentifierTypeCodes (extensible): A coded type for an identifier that can be used to determine which identifier to use for a specific purpose.
Required Pattern: At least the following
...... id 0..1 string Unique id for inter-element referencing
...... extension 0..* Extension Additional content defined by implementations
...... coding 1..* Coding Code defined by a terminology system
Fixed Value: (complex)
....... id 0..1 string Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
....... system 1..1 uri Identity of the terminology system
Fixed Value: http://terminology.hl7.org/CodeSystem/v2-0203
....... version 0..1 string Version of the system - if relevant
....... code 1..1 code Symbol in syntax defined by the system
Fixed Value: ACSN
....... display 0..1 string Representation defined by the system
....... userSelected 0..1 boolean If this coding was chosen directly by the user
...... text 0..1 string Plain text representation of the concept
..... system Σ 1..1 uri The namespace for the identifier value
Required Pattern: https://fhir.ru/ig/semd/systems/specimen
... status ?!Σ 0..1 code available | unavailable | unsatisfactory | entered-in-error
Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
... type SΣ 0..1 CodeableConcept Тип материала исследования
Binding: Типы материалов исследования (required)
... collection S 1..1 BackboneElement Сведения о заборе материала
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... collector SΣ 0..1 Reference(SEMD PractitionerRole (Роль медицинского работника СЭМД)) Сборщик материала
.... quantity S 0..1 SimpleQuantity Количество материала
..... unit Σ 0..1 string Unit representation
Binding: Единицы измерения (required)
..... system ΣC 0..1 uri System that defines coded unit form
Binding: Единицы измерения (required)
..... code ΣC 0..1 code Coded form of the unit
Binding: Единицы измерения (required)

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet / CodeURI
Specimen.identifier:specimenId.userequiredIdentifierUse
http://hl7.org/fhir/ValueSet/identifier-use|5.0.0
From the FHIR Standard
Specimen.identifier:specimenId.typeextensiblePattern Value: ACSN
http://hl7.org/fhir/ValueSet/identifier-type
From the FHIR Standard
Specimen.statusrequiredSpecimenStatus
http://hl7.org/fhir/ValueSet/specimen-status|5.0.0
From the FHIR Standard
Specimen.typerequiredPLI_Vs_Nsi_Specimen_Types(a valid code from urn:oid:1.2.643.5.1.13.13.99.2.1019)
https://fhir.ru/ig/semd/ValueSet/pli-vs-nsi-specimen-types
From this IG
Specimen.collection.quantity.unitrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.systemrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.coderequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG

Constraints

IdGradePath(s)DetailsRequirements
dom-2errorSpecimenIf the resource is contained in another resource, it SHALL NOT contain nested Resources
: contained.contained.empty()
dom-3errorSpecimenIf the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource
: contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated
: contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a security label
: contained.meta.security.empty()
dom-6best practiceSpecimenA resource should have narrative for robust management
: text.`div`.exists()
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

Differential View

This structure is derived from Specimen

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen Specimen
... Slices for identifier 1..* Identifier External Identifier
Slice: Unordered, Open by value:system
.... identifier:specimenId 1..1 Identifier Идентификатор материала исследования
..... type 1..1 CodeableConcept Description of identifier
Required Pattern: At least the following
...... coding 1..* Coding Code defined by a terminology system
Fixed Value: (complex)
....... system 1..1 uri Identity of the terminology system
Fixed Value: http://terminology.hl7.org/CodeSystem/v2-0203
....... code 1..1 code Symbol in syntax defined by the system
Fixed Value: ACSN
..... system 1..1 uri The namespace for the identifier value
Required Pattern: https://fhir.ru/ig/semd/systems/specimen
... type S 0..1 CodeableConcept Тип материала исследования
Binding: Типы материалов исследования (required)
... collection S 1..1 BackboneElement Сведения о заборе материала
.... collector S 0..1 Reference(SEMD PractitionerRole (Роль медицинского работника СЭМД)) Сборщик материала
.... quantity S 0..1 SimpleQuantity Количество материала
..... unit 0..1 string Unit representation
Binding: Единицы измерения (required)
..... system 0..1 uri System that defines coded unit form
Binding: Единицы измерения (required)
..... code 0..1 code Coded form of the unit
Binding: Единицы измерения (required)

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSetURI
Specimen.typerequiredPLI_Vs_Nsi_Specimen_Types(a valid code from urn:oid:1.2.643.5.1.13.13.99.2.1019)
https://fhir.ru/ig/semd/ValueSet/pli-vs-nsi-specimen-types
From this IG
Specimen.collection.quantity.unitrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.systemrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.coderequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG

Snapshot View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* Specimen Sample for analysis
... id Σ 0..1 id Logical id of this artifact
... meta Σ 0..1 Meta Metadata about the resource
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... text 0..1 Narrative Text summary of the resource, for human interpretation
This profile does not constrain the narrative in regard to content, language, or traceability to data elements
... contained 0..* Resource Contained, inline Resources
... extension 0..* Extension Additional content defined by implementations
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
... Slices for identifier Σ 1..* Identifier External Identifier
Slice: Unordered, Open by value:system
.... identifier:specimenId Σ 1..1 Identifier Идентификатор материала исследования
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
..... use ?!Σ 0..1 code usual | official | temp | secondary | old (If known)
Binding: IdentifierUse (required): Identifies the purpose for this identifier, if known .
..... type Σ 1..1 CodeableConcept Description of identifier
Binding: IdentifierTypeCodes (extensible): A coded type for an identifier that can be used to determine which identifier to use for a specific purpose.
Required Pattern: At least the following
...... id 0..1 string Unique id for inter-element referencing
...... extension 0..* Extension Additional content defined by implementations
...... coding 1..* Coding Code defined by a terminology system
Fixed Value: (complex)
....... id 0..1 string Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
....... system 1..1 uri Identity of the terminology system
Fixed Value: http://terminology.hl7.org/CodeSystem/v2-0203
....... version 0..1 string Version of the system - if relevant
....... code 1..1 code Symbol in syntax defined by the system
Fixed Value: ACSN
....... display 0..1 string Representation defined by the system
....... userSelected 0..1 boolean If this coding was chosen directly by the user
...... text 0..1 string Plain text representation of the concept
..... system Σ 1..1 uri The namespace for the identifier value
Required Pattern: https://fhir.ru/ig/semd/systems/specimen
..... value ΣC 0..1 string The value that is unique
Example General: 123456
..... period Σ 0..1 Period Time period when id is/was valid for use
..... assigner Σ 0..1 Reference(Organization) Organization that issued id (may be just text)
... accessionIdentifier Σ 0..1 Identifier Identifier assigned by the lab
... status ?!Σ 0..1 code available | unavailable | unsatisfactory | entered-in-error
Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
... type SΣ 0..1 CodeableConcept Тип материала исследования
Binding: Типы материалов исследования (required)
... subject Σ 0..1 Reference(Patient | Group | Device | BiologicallyDerivedProduct | Substance | Location) Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance, a biologically-derived product, or a device
... receivedTime Σ 0..1 dateTime The time when specimen is received by the testing laboratory
... parent 0..* Reference(Specimen) Specimen from which this specimen originated
... request 0..* Reference(ServiceRequest) Why the specimen was collected
... combined Σ 0..1 code grouped | pooled
Binding: SpecimenCombined (required): Codes for the combined status of a specimen.
... role 0..* CodeableConcept The role the specimen serves
Binding: SpecimenRole (preferred): Codes describing specimen role.
... feature 0..* BackboneElement The physical feature of a specimen
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... type 1..1 CodeableConcept Highlighted feature
Binding: SNOMEDCTBodyStructures (example): SNOMED CT Body site concepts
.... description 1..1 string Information about the feature
... collection S 1..1 BackboneElement Сведения о заборе материала
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... collector SΣ 0..1 Reference(SEMD PractitionerRole (Роль медицинского работника СЭМД)) Сборщик материала
.... collected[x] Σ 0..1 Collection time
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration Σ 0..1 Duration How long it took to collect specimen
.... quantity S 0..1 SimpleQuantity Количество материала
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
..... value Σ 0..1 decimal Numerical value (with implicit precision)
..... unit Σ 0..1 string Unit representation
Binding: Единицы измерения (required)
..... system ΣC 0..1 uri System that defines coded unit form
Binding: Единицы измерения (required)
..... code ΣC 0..1 code Coded form of the unit
Binding: Единицы измерения (required)
.... method 0..1 CodeableConcept Technique used to perform collection
Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure.
.... device 0..1 CodeableReference(Device) Device used to perform collection
Binding Description: (example): The device that was used to obtain the specimen (e.g. a catheter or catheter part used to draw the blood via a central line).
.... procedure 0..1 Reference(Procedure) The procedure that collects the specimen
.... bodySite 0..1 CodeableReference(BodyStructure) Anatomical collection site
Binding: SNOMEDCTBodyStructures (example): SNOMED CT Body site concepts
.... fastingStatus[x] Σ 0..1 Whether or how long patient abstained from food and/or drink
Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient.
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration
... processing 0..* BackboneElement Processing and processing step details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... description 0..1 string Textual description of procedure
.... method 0..1 CodeableConcept Indicates the treatment step applied to the specimen
Binding: SpecimenProcessingMethod (example): Type indicating the technique used to process the specimen.
.... additive 0..* Reference(Substance) Material used in the processing step
.... time[x] 0..1 Date and time of specimen processing
..... timeDateTime dateTime
..... timePeriod Period
... container 0..* BackboneElement Direct container of specimen (tube/slide, etc.)
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... device 1..1 Reference(Device) Device resource for the container
.... location 0..1 Reference(Location) Where the container is
.... specimenQuantity 0..1 SimpleQuantity Quantity of specimen within container
... condition Σ 0..* CodeableConcept State of the specimen
Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
... note 0..* Annotation Comments

doco Documentation for this format

Terminology Bindings

PathConformanceValueSet / CodeURI
Specimen.languagerequiredAllLanguages
http://hl7.org/fhir/ValueSet/all-languages|5.0.0
From the FHIR Standard
Specimen.identifier:specimenId.userequiredIdentifierUse
http://hl7.org/fhir/ValueSet/identifier-use|5.0.0
From the FHIR Standard
Specimen.identifier:specimenId.typeextensiblePattern Value: ACSN
http://hl7.org/fhir/ValueSet/identifier-type
From the FHIR Standard
Specimen.statusrequiredSpecimenStatus
http://hl7.org/fhir/ValueSet/specimen-status|5.0.0
From the FHIR Standard
Specimen.typerequiredPLI_Vs_Nsi_Specimen_Types(a valid code from urn:oid:1.2.643.5.1.13.13.99.2.1019)
https://fhir.ru/ig/semd/ValueSet/pli-vs-nsi-specimen-types
From this IG
Specimen.combinedrequiredSpecimenCombined
http://hl7.org/fhir/ValueSet/specimen-combined|5.0.0
From the FHIR Standard
Specimen.rolepreferredSpecimenRole
http://hl7.org/fhir/ValueSet/specimen-role
From the FHIR Standard
Specimen.feature.typeexampleSNOMEDCTBodyStructures
http://hl7.org/fhir/ValueSet/body-site
From the FHIR Standard
Specimen.collection.quantity.unitrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.systemrequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.quantity.coderequiredCore_Vs_Nsi_Units_Of_Measurement(a valid code from Core CodeSystem NSI Units Of Measurement (Единицы измерения))
https://fhir.ru/ig/core/ValueSet/core-vs-nsi-units-of-measurement
From this IG
Specimen.collection.methodexampleFHIRSpecimenCollectionMethod
http://hl7.org/fhir/ValueSet/specimen-collection-method
From the FHIR Standard
Specimen.collection.deviceexample
Specimen.collection.bodySiteexampleSNOMEDCTBodyStructures
http://hl7.org/fhir/ValueSet/body-site
From the FHIR Standard
Specimen.collection.fastingStatus[x]extensibleHl7VSRelevantClincialInformation
http://terminology.hl7.org/ValueSet/v2-0916
Specimen.processing.methodexampleSpecimenProcessingMethod
http://hl7.org/fhir/ValueSet/specimen-processing-method
From the FHIR Standard
Specimen.conditionextensibleHl7VSSpecimenCondition
http://terminology.hl7.org/ValueSet/v2-0493

Constraints

IdGradePath(s)DetailsRequirements
dom-2errorSpecimenIf the resource is contained in another resource, it SHALL NOT contain nested Resources
: contained.contained.empty()
dom-3errorSpecimenIf the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource
: contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated
: contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5errorSpecimenIf a resource is contained in another resource, it SHALL NOT have a security label
: contained.meta.security.empty()
dom-6best practiceSpecimenA resource should have narrative for robust management
: text.`div`.exists()
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

This structure is derived from Specimen

Summary

Mandatory: 5 elements
Must-Support: 4 elements

Structures

This structure refers to these other structures:

Slices

This structure defines the following Slices:

  • The element 1 is sliced based on the value of Specimen.identifier

 

Other representations of profile: CSV, Excel, Schematron