Molecular Definition Implementation Guide for Molecular Data Types, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/molecular-definition-data-types/ and changes regularly. See the Directory of published versions
: example-sequence-cyp2c19-upstream-region - TTL Representation
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@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <https://loinc.org/rdf/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
a fhir:MolecularDefinition ;
fhir:nodeRole fhir:treeRoot ;
fhir:id [ fhir:v "example-sequence-cyp2c19-upstream-region"] ; #
fhir:meta [
( fhir:profile [
fhir:v "http://hl7.org/fhir/uv/molecular-definition-data-types/StructureDefinition/sequence"^^xsd:anyURI ;
fhir:link <http://hl7.org/fhir/uv/molecular-definition-data-types/StructureDefinition/sequence> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: MolecularDefinition example-sequence-cyp2c19-upstream-region</b></p><a name=\"example-sequence-cyp2c19-upstream-region\"> </a><a name=\"hcexample-sequence-cyp2c19-upstream-region\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-sequence.html\">Sequence</a></p></div><p><b>moleculeType</b>: <span title=\"Codes:{http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecule-type dna}\">DNA Sequence</span></p><p><b>type</b>: <span title=\"Codes:{http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecule-type dna}\">DNA Sequence</span></p><blockquote><p><b>representation</b></p><blockquote><p><b>extracted</b></p><p><b>startingMolecule</b>: <a href=\"MolecularDefinition-example-sequence-cyp2c19-accession.html\">MolecularDefinition: moleculeType = DNA Sequence; type = DNA Sequence</a></p><blockquote><p><b>coordinateInterval</b></p><h3>CoordinateSystems</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>System</b></td></tr><tr><td style=\"display: none\">*</td><td><span title=\"Codes:{http://loinc.org LA30100-4}\">0-based interval counting</span></td></tr></table><p><b>start</b>: 1</p><p><b>end</b>: 5000</p></blockquote><p><b>reverseComplement</b>: false</p></blockquote></blockquote></div>"^^rdf:XMLLiteral
] ; #
fhir:moleculeType [
( fhir:coding [
fhir:system [ fhir:v "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecule-type"^^xsd:anyURI ] ;
fhir:code [ fhir:v "dna" ] ;
fhir:display [ fhir:v "DNA Sequence" ] ] )
] ; #
fhir:type ( [
( fhir:coding [
fhir:system [ fhir:v "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecule-type"^^xsd:anyURI ] ;
fhir:code [ fhir:v "dna" ] ;
fhir:display [ fhir:v "DNA Sequence" ] ] )
] ) ; #
fhir:representation ( [
fhir:extracted [
fhir:startingMolecule [
fhir:reference [ fhir:v "MolecularDefinition/example-sequence-cyp2c19-accession" ] ] ;
fhir:coordinateInterval [
fhir:coordinateSystem [
fhir:system [
( fhir:coding [
a loinc:LA30100-4 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "LA30100-4" ] ;
fhir:display [ fhir:v "0-based interval counting" ] ] ) ] ] ;
fhir:start [
a fhir:Quantity ;
fhir:value [ fhir:v "1"^^xsd:decimal ] ] ;
fhir:end [
a fhir:Quantity ;
fhir:value [ fhir:v "5000"^^xsd:decimal ] ] ] ;
fhir:reverseComplement [ fhir:v false ] ]
] ) . #
