Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build
Molecular Definition Implementation Guide for Molecular Data Types, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/molecular-definition-data-types/ and changes regularly. See the Directory of published versions
Page standards status: Draft | Maturity Level: 0 |
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<id value="molecular-definition-focus"/>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: CodeSystem molecular-definition-focus</b></p><a name="molecular-definition-focus"> </a><a name="hcmolecular-definition-focus"> </a><p>This case-sensitive code system <code>http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecular-definition-focus</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style="white-space:nowrap">context-state<a name="molecular-definition-focus-context-state"> </a></td><td>Context State</td><td>Context State is the current state of the molecule at this location.</td></tr><tr><td style="white-space:nowrap">allele-state<a name="molecular-definition-focus-allele-state"> </a></td><td>Allele State</td><td>Allele State is the state of the molecule based on a specific allele.</td></tr><tr><td style="white-space:nowrap">reference-state<a name="molecular-definition-focus-reference-state"> </a></td><td>Reference State</td><td>Reference State is the state of the molecule based on a reference molecule.</td></tr><tr><td style="white-space:nowrap">alternative-state<a name="molecular-definition-focus-alternative-state"> </a></td><td>Alternative State</td><td>Alternative State is the molecule state of the molecule based on an alterntive allele.</td></tr></table></div>
</text>
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<url
value="http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/molecular-definition-focus"/>
<version value="1.0.0-ballot1"/>
<name value="MolecularDefinitionFocus"/>
<title value="Molecular Definition Focus"/>
<status value="draft"/>
<experimental value="false"/>
<date value="2025-09-05T20:30:49+00:00"/>
<publisher value="HL7 International / Clinical Genomics"/>
<contact>
<name value="HL7 International / Clinical Genomics"/>
<telecom>
<system value="url"/>
<value value="http://www.hl7.org/Special/committees/clingenomics"/>
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<telecom>
<system value="email"/>
<value value="cg@lists.HL7.org"/>
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<description
value="Molecular Definition Focus terms that describe various representation elements."/>
<jurisdiction>
<coding>
<system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
<code value="001"/>
<display value="World"/>
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<count value="4"/>
<concept>
<code value="context-state"/>
<display value="Context State"/>
<definition
value="Context State is the current state of the molecule at this location."/>
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<concept>
<code value="allele-state"/>
<display value="Allele State"/>
<definition
value="Allele State is the state of the molecule based on a specific allele."/>
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<concept>
<code value="reference-state"/>
<display value="Reference State"/>
<definition
value="Reference State is the state of the molecule based on a reference molecule."/>
</concept>
<concept>
<code value="alternative-state"/>
<display value="Alternative State"/>
<definition
value="Alternative State is the molecule state of the molecule based on an alterntive allele."/>
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