FHIR to OMOP FHIR IG
2.0.0-ballot - STU 1 Ballot
FHIR to OMOP FHIR IG
2.0.0-ballot - STU 1 Ballot
FHIR to OMOP FHIR IG, published by HL7 International / Biomedical Research and Regulation. This guide is not an authorized publication; it is the continuous build for version 2.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-omop-ig/ and changes regularly. See the Directory of published versions
| Page standards status: Trial-use | Maturity Level: 2 |
{
"resourceType" : "StructureMap",
"id" : "SimpleVitalSignsMap",
"language" : "en",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap SimpleVitalSignsMap</b></p><a name=\"SimpleVitalSignsMap\"> </a><a name=\"hcSimpleVitalSignsMap\"> </a><pre class=\"fml\">\r\n<span style=\"color: #cc00cc\">/// <b>url</b> = </span><span style=\"color: blue\">'http://hl7.org/fhir/uv/omop/StructureMap/SimpleVitalSignsMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>name</b> = </span><span style=\"color: blue\">'SimpleVitalSignsMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>title</b> = </span><span style=\"color: blue\">'Mapping Vital Ssigns resource to Measurement OMOP Domain'</span>\r\n<span style=\"color: #cc00cc\">/// <b>status</b> = </span><span style=\"color: blue\">'active'</span>\r\n<span style=\"color: #cc00cc\">/// <b>description</b> = </span><span style=\"color: blue\">'This mapping maps simple FHIR Vital Signs instances that are considered measurements to OMOP Measurement Table objects.'</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R5/observation.html\" title=\"Observation\">http://hl7.org/fhir/StructureDefinition/Observation</a><span style=\"color: navy\">" </span><b>alias </b>VitalSigns <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-Measurement.html\" title=\"Measurement OMOP Table\">http://hl7.org/fhir/uv/omop/StructureDefinition/Measurement</a><span style=\"color: navy\">" </span><b>alias </b>MeasureTable <b>as </b><b>target</b>\r\n\r\n<b>group </b>VitalSigns<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>VitalSigns, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\"> : </span>MeasureTable<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src<b> where </b><span style=\"color: navy\">(</span>src.category.coding.code contains 'vital-signs'<span style=\"color: navy\">)</span><b> then</b><span style=\"color: navy\"> {\r\n</span> src<b> where </b><span style=\"color: navy\">(</span>src.effective.empty().not()<span style=\"color: navy\">)</span><b> then</b><span style=\"color: navy\"> {\r\n</span> src.code<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span>tgt<b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span>tgt<b> then</b><span style=\"color: navy\"> {\r\n</span> sc.system<b> where </b><span style=\"color: navy\">(</span>'http://loinc.org'<span style=\"color: navy\">)</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><b> where </b><span style=\"color: navy\">(</span>(a in ('85354-9' | '8480-6' | '8462-4' | '8478-0')).not()<span style=\"color: navy\">)</span><span style=\"color: navy\"><b> -> </b></span>tgt.measurement_type_concept_id = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">a</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'http://hl7.org/fhir/uv/omop/ConceptMap/VitalSignsCodes'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'code'</span><span style=\"color: navy\">)</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.display<b> as </b><span style=\"color: maroon\">display</span><span style=\"color: navy\"><b> -> </b></span>tgt.measurement_concept_id = <span style=\"color: maroon\">display</span><span style=\"color: navy\">;</span>\r\n src.effective<span style=\"color: navy\"> : </span>dateTime<b> as </b><span style=\"color: maroon\">edt</span><span style=\"color: navy\"><b> -> </b></span> tgt.measurement_datetime = <span style=\"color: maroon\">edt</span><span style=\"color: navy\">, </span> tgt.measurement_date = <span style=\"color: navy\">(</span>edt.toString().substring(0, 10)<span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.effective<span style=\"color: navy\"> : </span>instant<b> as </b><span style=\"color: maroon\">einst</span><span style=\"color: navy\"><b> -> </b></span> tgt.measurement_datetime = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">einst</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'dateTime'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> <span style=\"color: navy\">(</span>einst.toString().substring(0, 10)<span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.effective<span style=\"color: navy\"> : </span>Period<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span>tgt<b> then</b><span style=\"color: navy\"> {\r\n</span> s.start<b> as </b><span style=\"color: maroon\">eps</span><span style=\"color: navy\"><b> -> </b></span> tgt.measurement_datetime = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">eps</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'dateTime'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> tgt.measurement_date = <span style=\"color: navy\">(</span>eps.toString().substring(0, 10)<span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: #b36b00\" title=\"This element was not defined prior to R5\">// src.issued as s where (src.issued.toDate() != src.effective) -> tgt.measurement_source_value = (s.toString());</span>\r\n src.value<span style=\"color: navy\"> : </span>Quantity<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span>tgt<b> then</b><span style=\"color: navy\"> {\r\n</span> s.value<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_as_number = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">a</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'decimal'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n s.unit<b> as </b><span style=\"color: maroon\">b</span><span style=\"color: navy\"><b> -> </b></span>tgt.unit_concept_id = <span style=\"color: maroon\">b</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.value<span style=\"color: navy\"> : </span>CodeableConcept<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span>tgt<b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span>tgt<b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_as_concept_id = <span style=\"color: maroon\">code</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.value<span style=\"color: navy\"> : </span>string<b> as </b><span style=\"color: maroon\">b</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_source_value = <span style=\"color: maroon\">b</span><span style=\"color: navy\">;</span>\r\n src.interpretation<b> as </b><span style=\"color: maroon\">c</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_as_concept_id = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">c</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'code'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.note<b> as </b><span style=\"color: maroon\">d</span><span style=\"color: navy\"><b> -> </b></span>tgt.measurement_source_value = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">d</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'string'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"vitalSignMapping"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"OnlyMeasures"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
},
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"valueCode" : "brr"
},
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"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
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"url" : "http://hl7.org/fhir/uv/omop/StructureMap/SimpleVitalSignsMap",
"identifier" : [
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"value" : "urn:oid:2.16.840.1.113883.4.642.40.77.43.11"
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"version" : "2.0.0-ballot",
"name" : "SimpleVitalSignsMap",
"title" : "Mapping Vital Ssigns resource to Measurement OMOP Domain",
"status" : "active",
"date" : "2026-08-14T16:09:20+00:00",
"publisher" : "HL7 International / Biomedical Research and Regulation",
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IG © 2023+ HL7 International / Biomedical Research and Regulation.
Package hl7.fhir.uv.omop#2.0.0-ballot based on FHIR 5.0.0.
Generated
2026-08-14
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