HL7 Czech Lab Epidemiology Guide
0.0.1 - ci-build
HL7 Czech Lab Epidemiology Guide
0.0.1 - ci-build
HL7 Czech Lab Epidemiology Guide, published by HL7 Czech Republic. This guide is not an authorized publication; it is the continuous build for version 0.0.1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7-cz/lab-epi/ and changes regularly. See the Directory of published versions
| Official URL: https://hl7.cz/fhir/lab-epi/ConceptMap/SLRBodyEn-to-CZLab | Version: 0.0.1 | |||
| Draft as of 2025-12-19 | Computable Name: SLRBodyEnToCZLab | |||
Maps SLR Body logical model to CZ Lab message profiles
Shows how body data elements map to ServiceRequest/Specimen/DiagnosticReport/Observation/etc.
Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to https://example.org/fhir/ImplementationGuide/cz-lab-message
Group 1 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to ServiceRequest – CZ Lab Order (message context)
| Source Code | Relationship | Target Code | Comment |
| SLRBodyEn.body.order.identifier (Order number) | is equivalent to | ServiceRequest.identifier | |
| SLRBodyEn.body.order.reason (Order reason (diagnosis)) | is equivalent to | ServiceRequest.reasonCode | ICD-10 (MKN-10) where applicable. |
Group 2 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to DiagnosticReport – CZ Lab Report (message payload)
| Source Code | Relationship | Target Code | Comment |
| SLRBodyEn.body.order (Order) | is related to | DiagnosticReport.basedOn | Reference(ServiceRequest). |
Group 3 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to Specimen – CZ Lab
| Source Code | Relationship | Target Code |
| SLRBodyEn.body.specimen.sampleNumber (Sample identifier) | is equivalent to | Specimen.identifier |
| SLRBodyEn.body.specimen.collectionDate (Collection date/time) | is equivalent to | Specimen.collection.collectedDateTime |
| SLRBodyEn.body.specimen.material (Material (Specimen type)) | is equivalent to | Specimen.type |
Group 4 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to DiagnosticReport – CZ Lab Report (message payload)
| Source Code | Relationship | Target Code |
| SLRBodyEn.body.specimen (Specimen info) | is related to | DiagnosticReport.specimen |
Group 5 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to Observation – CZ Lab Result (qual/quant, AST)
| Source Code | Relationship | Target Code |
| SLRBodyEn.body.specimen (Specimen info) | is related to | Observation.specimen |
Group 6 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to Observation – CZ Lab Result (qual/quant, AST)
| Source Code | Relationship | Target Code | Comment |
| SLRBodyEn.body.result.examDate (Examination date/time) | is equivalent to | Observation.effectiveDateTime | |
| SLRBodyEn.body.result.method (Method) | is related to | Observation.method | |
| SLRBodyEn.body.result.analyteOrAgent (Analyte / Agent) | is equivalent to | Observation.code | Tested analyte/agent (e.g., detection of pathogen). |
| SLRBodyEn.body.result.qualitativeResult (Qualitative result) | is equivalent to | Observation.valueCodeableConcept | |
| SLRBodyEn.body.result.quantitativeResult.value (Quantitative value) | is equivalent to | Observation.valueQuantity | Use UCUM units. |
| SLRBodyEn.body.result.quantitativeResult.unit (Unit (UCUM)) | is related to | Observation.valueQuantity.unit | |
| SLRBodyEn.body.result.cutOff (Cut-off) | is related to | Observation.referenceRange | Model cut-off in referenceRange.low/high. |
| SLRBodyEn.body.result.antibiotic (Antibiotic susceptibility (S/I/R)) | is related to | Observation | Model as multiple Observations (code=susceptibility test, value=S/I/R). |
Group 7 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to DiagnosticReport – CZ Lab Report (message payload)
| Source Code | Relationship | Target Code |
| SLRBodyEn.body.result (Results) | is related to | DiagnosticReport.result |
Group 8 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to MedicationStatement – ATB/ATV před odběrem
| Source Code | Relationship | Target Code | Comment |
| SLRBodyEn.body.clinicalInformation.priorTherapy (Antiviral/antibiotic therapy before collection) | is related to | MedicationStatement | Use adherence/effective[x]/medicationCodeableConcept (SÚKL). |
Group 9 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to Patient – CZ Lab (RID)
| Source Code | Relationship | Target Code | Comment |
| SLRBodyEn.body.clinicalInformation.symptomOnset (Symptom onset date) | (not mapped) | Prefer Condition.onsetDateTime or a dedicated Observation; extension here only if required. | |
Group 10 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to Organization – CZ Lab (IČO/PCZ/ICP)
| Source Code | Relationship | Target Code |
| SLRBodyEn.body.laboratory.organizationIdentifiers (Lab organization IČO/PCZ/ICP) | is equivalent to | Organization.identifier |
Group 11 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to DiagnosticReport – CZ Lab Report (message payload)
| Source Code | Relationship | Target Code |
| SLRBodyEn.body.laboratory (Performing laboratory) | is related to | DiagnosticReport.performer |
Group 12 Mapping from https://example.org/fhir/StructureDefinition/SLRBodyEn to DiagnosticReport – CZ Lab Report (message payload)
| Source Code | Relationship | Target Code |
| SLRBodyEn.body.presentedForm (Presented form (PDF, etc.)) | is related to | DiagnosticReport.presentedForm |
| SLRBodyEn.body.attachments (Additional attachments) | is related to | DiagnosticReport.media.link.content.attachment |