Pathology Report Document Bundle SARS-CoV-2 (COVID-19) PCR for Mrs Anne Thompson - Australian Digital Health Agency FHIR Implementation Guide v1.2.0-ci-build

Australian Digital Health Agency FHIR Implementation Guide, published by Australian Digital Health Agency. This guide is not an authorized publication; it is the continuous build for version 1.2.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/AuDigitalHealth/ci-fhir-r4/ and changes regularly. See the Directory of published versions

Example Bundle: Pathology Report Document Bundle SARS-CoV-2 (COVID-19) PCR for Mrs Anne Thompson

Document Details

Generated Narrative: Bundle SARS-CoV-2 (COVID-19) PCR for Mrs. Anne THOMPSON

Last updated: 2022-03-17 11:46:00+1000

Profile: ADHA Document Bundle

Final Document at 2021-02-15 20:00:00+1000 by Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000 for Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000

Document Subject

Generated Narrative: Patient mhr-anne-thompson

Mrs. Anne Thompson(official) Female, DoB: 1978-10-11 ( IHI: AustalianIHI#8003608000228445)

Other Id:

Medical record number/123456

Language:

Yugambal

Australian Indigenous Status

australian-indigenous-status-1 1: Aboriginal but not Torres Strait Islander origin

Document Content

Pathology

Report Details
Report Date/Time	Report Name	Report Status	Lab No	Consultant
15-Feb-2021 20:00	SARS-CoV-2 (COVID-19) PCR for Mrs. Anne THOMPSON	Final	DOO3Q978	Dr. Adam MEYER (Microbiologist) (07) 7010 3453

SARS-Cov-2 (COVID-19) PCR
Specimen Type	Primary Specimen Site	Collection Setting	Date Collected	Time Collected	Test Name	Result	Diagnostic Service
Swab	Nasopharyngeal	COVID HSC Assessment Clinic	15-Feb-2021	12:00	SARS-CoV-2 PCR	Not Detected	Microbiology

Comments
Doomben Pathology QLD NATA/RCPA accreditation does not cover the SARS-CoV-2 (COVID-19) PCR test.
This test is currently under evaluation and has not been fully validated. Failure to detect organism-specific nucleic acids does not exclude the presence of disease due to this agent.

Link to PDF document

Additional Resources Included in Document

Entry 1 - fullUrl = urn:uuid:ddba0aed-3f03-429e-baa1-d5d465cc1d00

Resource Composition:

Generated Narrative: Composition 1bf8dc5a-f11c-4417-a19d-39826e487cf4

Language: en-AU
identifier: URI/urn:uuid:9cb8267f-fcfd-4341-bc89-e53e4ce9646c
status: Final
type: Pathology Report
category: Pathology Report
date: 2021-02-15 20:00:00+1000
author: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000
title: SARS-CoV-2 (COVID-19) PCR for Mrs. Anne THOMPSON
custodian: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000

Entry 2 - fullUrl = urn:uuid:a790bf00-6c3f-4acd-b786-b5b713f67ce2

Resource DiagnosticReport:

Pathology Report

15 Feb 2021 12:00

Mrs. Anne THOMPSON DoB 11 OCT 1978 GENDER Female IHI 8003 6080 0022 8437 MRN 123456 INDIGENOUS STATUS Aboriginal but not Torres Strait Islander origin

Request Details

Dr Greg Algregster (Algregster Medical Center QLD)

Order Identifier: 123451

Test Ordered: 2019-Novel Coronavirus PCR

Author

Dr Adam Meyer (Microbiologist) (HPI-I: 8003619900041630)

75 Hampden St, DOOMBEN, QLD, 4007

(07) 7010 3453

Doomben Pathology QLD (HPI-O: 8003623233366565) (NATA: 100101)

75 Hampden St, DOOMBEN, QLD, 4007

(07) 5550 3427 info@doombenpathlabs.example.com

Report Details

Report Date/Time: 15 Feb 2021 20:00

Report Name: SARS-Cov-2 (COVID-19) PCR for Mrs. Anne THOMPSON

Lab No: DOO3Q978

Report Status: Final

Diagnostice Service(s): Microbiology

Test Results

Diagnostic Service Test Name Result Collection Date/Time Specimen Type Primary Specimen Site Collection Setting

Microbiology 2019-Novel Coronavirus PCR Not Detected 16 Mar 2020 10:40:00 Swab Nasopharyngeal COVID HSC Assessment Clinic

Link to PDF document

Pathology Report
15 Feb 2021 12:00
Mrs. Anne THOMPSON	DoB	11 OCT 1978	GENDER	Female	IHI	8003 6080 0022 8437	MRN	123456	INDIGENOUS STATUS	Aboriginal but not Torres Strait Islander origin


Microbiology	2019-Novel Coronavirus PCR	Not Detected	16 Mar 2020 10:40:00	Swab	Nasopharyngeal	COVID HSC Assessment Clinic

Entry 3 - fullUrl = urn:uuid:928aec02-866c-4b8b-a0fe-75e640a44d73

Resource Observation:

Generated Narrative: Observation covid-01

status: Final
category: Laboratory, Microbiology
code: 2019-Novel Coronavirus PCR
subject: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000
effective: 2021-02-15 12:00:00+1000
performer: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000
value: Not detected
note: Doomben Pathology QLD NATA/RCPA accreditation does not cover the SARS-CoV-2 (COVID-19) PCR test., This test is currently under evaluation and has not been fully validated. Failure to detect organism-specific nucleic acids does not exclude the presence of disease due to this agent.
specimen: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000

Entry 4 - fullUrl = urn:uuid:093f1be9-157d-4602-aa31-f8b658036893

Resource Specimen:

Generated Narrative: Specimen naso-swab-01

type: Swab
subject: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000
Collections
- Collected[x] BodySite
* 2021-02-15 12:00:00+1000 No display for Specimen.collection.bodySite (concept: Nasopharyngeal structure)
note: Collection Setting COVID HSC Assessment Clinic

Entry 5 - fullUrl = urn:uuid:dbd0afa4-8c3a-48cd-9fc9-72cf2f06adae

Resource ServiceRequest:

Generated Narrative: ServiceRequest order-covid-01

identifier: Placer Identifier/123451
status: Completed
intent: Order
category: Pathology service, Microbiology
code: No display for ServiceRequest.code (concept: )
subject: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000
requester: Dr Greg Algregster (Algregster Medical Center QLD)

Entry 6 - fullUrl = urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3

Resource Patient:

Generated Narrative: Patient mhr-anne-thompson
Mrs. Anne Thompson(official) Female, DoB: 1978-10-11 ( IHI: AustalianIHI#8003608000228445)
Other Id: Medical record number/123456
Language: Yugambal
Australian Indigenous Status australian-indigenous-status-1 1: Aboriginal but not Torres Strait Islander origin

Entry 7 - fullUrl = urn:uuid:0a8c38d1-b44c-4996-ae39-6a1c05a3489c

Resource PractitionerRole:

Generated Narrative: PractitionerRole meyer-adam-microbiologist

identifier: HPI-I/8003619900041630
practitioner: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000
organization: Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000
code: Microbiologist

Entry 8 - fullUrl = urn:uuid:f4c7c72e-c8fd-40a4-94e2-44e293db0ae2

Resource Practitioner:

Generated Narrative: Practitioner f4c7c72e-c8fd-40a4-94e2-44e293db0ae2

name: Adam MEYER
address: 75 Hampden St DOOMBEN QLD 4007 AU (work)

Entry 9 - fullUrl = urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860

Resource Organization:

Generated Narrative: Organization b56e2c36-36a7-4907-9751-1fdb438ca860

identifier: HPI-O/8003623233366565, NATA Accreditation Number/100101
name: Doomben Pathology QLD
contact
telecom: info@doombenpathlabs.example.com, ph: (07) 5550 3427(Work)
address: 75 Hampden St DOOMBEN QLD 4007 AU (work)