Australian Digital Health Agency FHIR Implementation Guide
1.2.0-ci-build - draft
Australian Digital Health Agency FHIR Implementation Guide
1.2.0-ci-build - draft
Australian Digital Health Agency FHIR Implementation Guide, published by Australian Digital Health Agency. This guide is not an authorized publication; it is the continuous build for version 1.2.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/AuDigitalHealth/ci-fhir-r4/ and changes regularly. See the Directory of published versions
@prefix fhir: <http://hl7.org/fhir/> . @prefix loinc: <https://loinc.org/rdf/> . @prefix owl: <http://www.w3.org/2002/07/owl#> . @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . @prefix sct: <http://snomed.info/id/> . @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . # - resource ------------------------------------------------------------------- a fhir:Bundle ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "report-covid-doc-01"] ; # fhir:meta [ fhir:lastUpdated [ fhir:v "2022-03-17T11:46:00+10:00"^^xsd:dateTime ] ; ( fhir:profile [ fhir:v "http://ns.electronichealth.net.au/fhir/StructureDefinition/dh-bundle-document-1"^^xsd:anyURI ; fhir:link <http://ns.electronichealth.net.au/fhir/StructureDefinition/dh-bundle-document-1> ] ) ] ; # fhir:identifier [ fhir:system [ fhir:v "urn:ietf:rfc:3986"^^xsd:anyURI ] ; fhir:value [ fhir:v "urn:uuid:b487469d-810c-40ae-b5a9-c0beb9001c9f" ] ] ; # fhir:type [ fhir:v "document"] ; # fhir:timestamp [ fhir:v "2022-03-17T11:46:00+10:00"^^xsd:dateTime] ; # fhir:entry ( [ fhir:fullUrl [ fhir:v "urn:uuid:ddba0aed-3f03-429e-baa1-d5d465cc1d00"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:ddba0aed-3f03-429e-baa1-d5d465cc1d00> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:a790bf00-6c3f-4acd-b786-b5b713f67ce2"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:a790bf00-6c3f-4acd-b786-b5b713f67ce2> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:928aec02-866c-4b8b-a0fe-75e640a44d73"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:928aec02-866c-4b8b-a0fe-75e640a44d73> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:093f1be9-157d-4602-aa31-f8b658036893"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:093f1be9-157d-4602-aa31-f8b658036893> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:dbd0afa4-8c3a-48cd-9fc9-72cf2f06adae"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:dbd0afa4-8c3a-48cd-9fc9-72cf2f06adae> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:0a8c38d1-b44c-4996-ae39-6a1c05a3489c"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:0a8c38d1-b44c-4996-ae39-6a1c05a3489c> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:f4c7c72e-c8fd-40a4-94e2-44e293db0ae2"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:f4c7c72e-c8fd-40a4-94e2-44e293db0ae2> ) ] [ fhir:fullUrl [ fhir:v "urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860"^^xsd:anyURI ] ; ( fhir:resource <urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860> ) ] ) . # Composition <urn:uuid:ddba0aed-3f03-429e-baa1-d5d465cc1d00> a fhir:Composition ; fhir:id [ fhir:v "1bf8dc5a-f11c-4417-a19d-39826e487cf4"] ; # fhir:language [ fhir:v "en-AU"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\" xml:lang=\"en-AU\" lang=\"en-AU\"><a name=\"Composition_1bf8dc5a-f11c-4417-a19d-39826e487cf4\"> </a><p class=\"res-header-id\"><b>Generated Narrative: Composition 1bf8dc5a-f11c-4417-a19d-39826e487cf4</b></p><a name=\"1bf8dc5a-f11c-4417-a19d-39826e487cf4\"> </a><a name=\"hc1bf8dc5a-f11c-4417-a19d-39826e487cf4\"> </a><a name=\"1bf8dc5a-f11c-4417-a19d-39826e487cf4-en-AU\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Language: en-AU</p></div><p><b>identifier</b>: <a href=\"http://terminology.hl7.org/5.0.0/NamingSystem-uri.html\" title=\"As defined by RFC 3986 (http://www.ietf.org/rfc/rfc3986.txt)(with many schemes defined in many RFCs). For OIDs and UUIDs, use the URN form (urn:oid:(note: lowercase) and urn:uuid:). See http://www.ietf.org/rfc/rfc3001.txt and http://www.ietf.org/rfc/rfc4122.txt \r\n\r\nThis oid is used as an identifier II.root to indicate the the extension is an absolute URI (technically, an IRI). Typically, this is used for OIDs and GUIDs. Note that when this OID is used with OIDs and GUIDs, the II.extension should start with urn:oid or urn:uuid: \r\n\r\nNote that this OID is created to aid with interconversion between CDA and FHIR - FHIR uses urn:ietf:rfc:3986 as equivalent to this OID. URIs as identifiers appear more commonly in FHIR.\r\n\r\nThis OID may also be used in CD.codeSystem.\">URI</a>/urn:uuid:9cb8267f-fcfd-4341-bc89-e53e4ce9646c</p><p><b>status</b>: Final</p><p><b>type</b>: <span title=\"Codes:{https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1 100.32001}\">Pathology Report</span></p><p><b>category</b>: <span title=\"Codes:{https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1 100.32001}\">Pathology Report</span></p><p><b>date</b>: 2021-02-15 20:00:00+1000</p><p><b>author</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-0a8c38d1-b44c-4996-ae39-6a1c05a3489c\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p><p><b>title</b>: SARS-CoV-2 (COVID-19) PCR for Mrs. Anne THOMPSON</p><p><b>custodian</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-b56e2c36-36a7-4907-9751-1fdb438ca860\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p></div>" ] ; # fhir:identifier [ fhir:system [ fhir:v "urn:ietf:rfc:3986"^^xsd:anyURI ] ; fhir:value [ fhir:v "urn:uuid:9cb8267f-fcfd-4341-bc89-e53e4ce9646c" ] ] ; # fhir:status [ fhir:v "final"] ; # fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1"^^xsd:anyURI ] ; fhir:code [ fhir:v "100.32001" ] ] ) ; fhir:text [ fhir:v "Pathology Report" ] ] ; # fhir:category ( [ ( fhir:coding [ fhir:system [ fhir:v "https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1"^^xsd:anyURI ] ; fhir:code [ fhir:v "100.32001" ] ] ) ] ) ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3" ] ; fhir:identifier [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NI" ] ; fhir:display [ fhir:v "National unique individual identifier" ] ] ) ; fhir:text [ fhir:v "IHI" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/ihi/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003608000228445" ] ] ] ; # fhir:date [ fhir:v "2021-02-15T20:00:00+10:00"^^xsd:dateTime] ; # fhir:author ( [ fhir:reference [ fhir:v "urn:uuid:0a8c38d1-b44c-4996-ae39-6a1c05a3489c" ] ] ) ; # fhir:title [ fhir:v "SARS-CoV-2 (COVID-19) PCR for Mrs. Anne THOMPSON"] ; # fhir:custodian [ fhir:reference [ fhir:v "urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860" ] ] ; # fhir:section ( [ fhir:title [ fhir:v "Pathology" ] ; fhir:code [ ( fhir:coding [ fhir:system [ fhir:v "https://healthterminologies.gov.au/fhir/CodeSystem/nctis-data-components-1"^^xsd:anyURI ] ; fhir:code [ fhir:v "101.20018" ] ; fhir:display [ fhir:v "Pathology" ] ] [ a loinc:11526-1 ; fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ; fhir:code [ fhir:v "11526-1" ] ; fhir:display [ fhir:v "Pathology study" ] ] ) ] ; fhir:text [ fhir:status [ fhir:v "additional" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\" lang=\"en-AU\">\n <table border=\"1\">\n <caption>Report Details</caption>\n <thead>\n <tr>\n <th>Report Date/Time</th>\n <th>Report Name</th>\n <th>Report Status</th>\n <th>Lab No</th>\n <th>Consultant</th>\n </tr>\n </thead>\n <tbody>\n <tr>\n <td>15-Feb-2021 20:00</td>\n <td>SARS-CoV-2 (COVID-19) PCR for Mrs. Anne THOMPSON</td>\n <td>Final</td>\n <td>DOO3Q978</td>\n <td>Dr. Adam MEYER (Microbiologist) (07) 7010 3453</td>\n </tr>\n </tbody>\n </table>\n <table border=\"1\">\n <caption>SARS-Cov-2 (COVID-19) PCR</caption>\n <thead>\n <tr>\n <th>Specimen Type</th>\n <th>Primary Specimen Site</th>\n <th>Collection Setting</th>\n <th>Date Collected</th>\n <th>Time Collected</th>\n <th>Test Name</th>\n <th>Result</th>\n <th>Diagnostic Service</th>\n </tr>\n </thead>\n <tbody>\n <tr>\n <td>Swab</td>\n <td>Nasopharyngeal</td>\n <td>COVID HSC Assessment Clinic</td>\n <td>15-Feb-2021</td>\n <td>12:00</td>\n <td>SARS-CoV-2 PCR</td>\n <td>Not Detected</td>\n <td>Microbiology</td>\n </tr>\n </tbody>\n </table>\n <table>\n <caption>Comments</caption>\n <tbody>\n <tr>\n <td>Doomben Pathology QLD NATA/RCPA accreditation does not cover the SARS-CoV-2 (COVID-19) PCR test.</td>\n </tr>\n <tr>\n <td>This test is currently under evaluation and has not been fully validated. Failure to detect\n organism-specific nucleic acids does not exclude the presence of disease due to this agent.</td>\n </tr>\n </tbody>\n </table>\n <p>\n <a href=\"https://github.com/AuDigitalHealth/ci-fhir-r4/tree/master/examples/DOO3Q978.pdf\">Link to PDF document</a>\n </p>\n </div>" ] ; ( fhir:entry [ fhir:reference [ fhir:v "urn:uuid:a790bf00-6c3f-4acd-b786-b5b713f67ce2" ] ] ) ] ) . # <urn:uuid:a790bf00-6c3f-4acd-b786-b5b713f67ce2> a fhir:DiagnosticReport ; fhir:id [ fhir:v "covid-01"] ; # fhir:language [ fhir:v "en-AU"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\" lang=\"en-AU\">\n <table style=\"border-collapse:collapse;border-spacing:0;width:100%;background-color:#000000\">\n <tr>\n <th colspan=\"9\" style=\"padding-top: 40px; vertical-align: top; text-align: center; margin 0px; font-size: 20px; font-family: Helvetica; color: #FFFFFF; font-weight: bold; word-wrap: break-word;\">Pathology Report</th>\n </tr>\n <tr>\n <td colspan=\"9\" style=\"vertical-align: top; text-align: center; margin 0px; font-size: 15px; font-family: Helvetica; color: #FFFFFF; font-weight: bold;\">15 Feb 2021 12:00</td>\n </tr>\n <tr>\n <td style=\"display: inline; margin-right: 20px; font-size: 13px; color: #FFFFFF;\">Mrs. Anne <span class=\"bold\">THOMPSON</span></td>\n <td style=\"display: inline; font-size: 11px; color: #FFFFFF;\">DoB</td>\n <td style=\"margin-left: 0px; display: inline; font-size: 11px; margin-right: 30px; color: #FFFFFF;\">11 OCT 1978</td>\n <td style=\"display: inline; font-size: 11px; color: #FFFFFF;\">GENDER</td>\n <td style=\"margin-left: 0px; display: inline; font-size: 11px; margin-right: 30px; color: #FFFFFF;\">Female</td>\n <td style=\"display: inline; font-size: 11px; color: #FFFFFF;\">IHI</td>\n <td style=\"margin-left: 0px; display: inline; font-size: 11px; margin-right: 30px; color: #FFFFFF;\">8003 6080 0022 8437</td>\n <td style=\"display: inline; font-size: 11px; color: #FFFFFF;\">MRN</td>\n <td style=\"margin-left: 0px; display: inline; font-size: 11px; margin-right: 30px; color: #FFFFFF;\">123456</td>\n <td style=\"display: inline; font-size: 11px; color: #FFFFFF;\">INDIGENOUS STATUS</td>\n <td style=\"margin-left: 0px; display: inline; font-size: 11px; margin-right: 30px; color: #FFFFFF; word-wrap: break-word;\">Aboriginal but not Torres Strait Islander origin</td>\n </tr>\n </table>\n <table style=\"width:100%\">\n <tbody>\n <tr>\n <td style=\"width:50%\">\n <table>\n <thead>\n <tr>\n <th colspan=\"2\" style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-size:14px; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Request Details</th>\n </tr>\n </thead>\n <tbody>\n <tr>\n <td>Dr Greg Algregster (Algregster Medical Center\n QLD)</td>\n </tr>\n <tr>\n <td style=\"font-weight: bold;\">Order\n Identifier:</td>\n <td>123451</td>\n </tr>\n <tr>\n <td style=\"font-weight: bold;\">Test Ordered:</td>\n <td>2019-Novel Coronavirus PCR</td>\n </tr>\n </tbody>\n </table>\n </td>\n <td>\n <table>\n <thead>\n <tr>\n <th colspan=\"2\" style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-size:14px; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Author</th>\n </tr>\n </thead>\n <tbody>\n <tr>\n <td>Dr Adam Meyer (Microbiologist) (HPI-I:\n 8003619900041630)</td>\n </tr>\n <tr>\n <td>75 Hampden St, DOOMBEN, QLD, 4007</td>\n </tr>\n <tr>\n <td>(07) 7010 3453</td>\n </tr>\n <tr>\n <td/>\n </tr>\n <tr>\n <td>Doomben Pathology QLD (HPI-O:\n 8003623233366565) (NATA: 100101)</td>\n </tr>\n <tr>\n <td>75 Hampden St, DOOMBEN, QLD, 4007</td>\n </tr>\n <tr>\n <td>(07) 5550 3427\n info@doombenpathlabs.example.com</td>\n </tr>\n </tbody>\n </table>\n </td>\n </tr>\n <tr>\n <td>\n <table>\n <thead>\n <tr>\n <th colspan=\"2\" style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-size:14px; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Report Details</th>\n </tr>\n </thead>\n <tbody>\n <tr>\n <td style=\"font-weight: bold;\">Report\n Date/Time:</td>\n <td>15 Feb 2021 20:00</td>\n </tr>\n <tr>\n <td style=\"font-weight: bold;\">Report Name:</td>\n <td>SARS-Cov-2 (COVID-19) PCR for Mrs. Anne\n THOMPSON</td>\n </tr>\n <tr>\n <td style=\"font-weight: bold;\">Lab No:</td>\n <td>DOO3Q978</td>\n </tr>\n <tr>\n <td style=\"font-weight: bold;\">Report Status:</td>\n <td>Final</td>\n </tr>\n <tr>\n <td style=\"font-weight: bold;\">Diagnostice\n Service(s):</td>\n <td>Microbiology</td>\n </tr>\n </tbody>\n </table>\n </td>\n </tr>\n </tbody>\n </table>\n <h1 style=\" width: 100%; font-size: 17px; font-weight: bold; color: #000000; margin-bottom: 5px; margin-top: 0px; border-bottom: 1px SOLID #000000;; padding: 0px; word-wrap: break-word;\">Test Results</h1>\n <table style=\"border-collapse:collapse;border-spacing:0;width:100%;\">\n <thead>\n <tr>\n <th>\n <tr>\n <th style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Diagnostic Service</th>\n <th style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Test Name</th>\n <th style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Result</th>\n <th style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Collection Date/Time</th>\n <th style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Specimen Type</th>\n <th style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Primary Specimen Site</th>\n <th style=\"padding-top: 15px; vertical-align: top; text-align: center; margin 0px; font-family: Helvetica; font-weight: bold; text-decoration: underline; text-align: left; word-wrap: break-word;\">Collection Setting</th>\n </tr>\n </th>\n </tr>\n </thead>\n <tbody>\n <tbody>\n <tr>\n <td>Microbiology</td>\n <td>2019-Novel Coronavirus PCR</td>\n <td>Not Detected</td>\n <td>16 Mar 2020 10:40:00</td>\n <td>Swab</td>\n <td>Nasopharyngeal</td>\n <td>COVID HSC Assessment Clinic</td>\n </tr>\n </tbody>\n </tbody>\n </table>\n <p>\n <a href=\"https://github.com/AuDigitalHealth/ci-fhir-r4/tree/master/examples/DOO3Q978.pdf\">Link to PDF document</a>\n </p>\n </div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "FILL" ] ; fhir:display [ fhir:v "Filler Identifier" ] ] ) ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hpio-scoped/report/1.0/8003623233366565"^^xsd:anyURI ] ; fhir:value [ fhir:v "DOO3Q978" ] ] ) ; # fhir:basedOn ( [ fhir:reference [ fhir:v "urn:uuid:dbd0afa4-8c3a-48cd-9fc9-72cf2f06adae" ] ] ) ; # fhir:status [ fhir:v "final"] ; # fhir:category ( [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0074"^^xsd:anyURI ] ; fhir:code [ fhir:v "LAB" ] ] ) ] [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0074"^^xsd:anyURI ] ; fhir:code [ fhir:v "MB" ] ] ) ] ) ; # fhir:code [ ( fhir:coding [ a loinc:94309-2 ; fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ; fhir:code [ fhir:v "94309-2" ] ] ) ; fhir:text [ fhir:v "2019-Novel Coronavirus PCR" ] ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3" ] ; fhir:identifier [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NI" ] ; fhir:display [ fhir:v "National unique individual identifier" ] ] ) ; fhir:text [ fhir:v "IHI" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/ihi/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003608000228445" ] ] ] ; # fhir:effective [ fhir:v "2021-02-15T12:00:00+10:00"^^xsd:dateTime] ; # fhir:issued [ fhir:v "2021-02-15T20:00:00+10:00"^^xsd:dateTime] ; # fhir:performer ( [ fhir:reference [ fhir:v "urn:uuid:0a8c38d1-b44c-4996-ae39-6a1c05a3489c" ] ] [ fhir:reference [ fhir:v "urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860" ] ] ) ; # fhir:result ( [ fhir:reference [ fhir:v "urn:uuid:928aec02-866c-4b8b-a0fe-75e640a44d73" ] ] ) ; # fhir:presentedForm ( [ fhir:contentType [ fhir:v "application/pdf" ] ; fhir:url [ fhir:v "pathresult.pdf"^^xsd:anyURI ] ; # Placeholder url value: Absolute URL to GitHub repository for attachment is provided as a workaround for demonstration purposes only fhir:hash [ fhir:v "9F692CB7D03EE6FE8E0500740446262F55FBADBC"^^xsd:base64Binary ] ; fhir:title [ fhir:v "2019-Novel Coronavirus PCR Report" ] ] ) . # <urn:uuid:928aec02-866c-4b8b-a0fe-75e640a44d73> a fhir:Observation ; fhir:id [ fhir:v "covid-01"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><a name=\"Observation_covid-01\"> </a><p class=\"res-header-id\"><b>Generated Narrative: Observation covid-01</b></p><a name=\"covid-01\"> </a><a name=\"hccovid-01\"> </a><a name=\"covid-01-en-AU\"> </a><p><b>status</b>: Final</p><p><b>category</b>: <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/observation-category laboratory}\">Laboratory</span>, <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/v2-0074 MB}\">Microbiology</span></p><p><b>code</b>: <span title=\"Codes:{http://loinc.org 94309-2}\">2019-Novel Coronavirus PCR</span></p><p><b>subject</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-bccc1479-bcd8-4478-a433-b271576003e3\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p><p><b>effective</b>: 2021-02-15 12:00:00+1000</p><p><b>performer</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-b56e2c36-36a7-4907-9751-1fdb438ca860\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p><p><b>value</b>: <span title=\"Codes:{http://snomed.info/sct 260415000}\">Not detected</span></p><p><b>note</b>: Doomben Pathology QLD NATA/RCPA accreditation does not cover the SARS-CoV-2 (COVID-19) PCR test., This test is currently under evaluation and has not been fully validated. Failure to detect organism-specific nucleic acids does not exclude the presence of disease due to this agent.</p><p><b>specimen</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-093f1be9-157d-4602-aa31-f8b658036893\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p></div>" ] ; # fhir:status [ fhir:v "final"] ; # fhir:category ( [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/observation-category"^^xsd:anyURI ] ; fhir:code [ fhir:v "laboratory" ] ] ) ] [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0074"^^xsd:anyURI ] ; fhir:code [ fhir:v "MB" ] ] ) ] ) ; # fhir:code [ ( fhir:coding [ a loinc:94309-2 ; fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ; fhir:code [ fhir:v "94309-2" ] ] ) ; fhir:text [ fhir:v "2019-Novel Coronavirus PCR" ] ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3" ] ; fhir:identifier [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NI" ] ; fhir:display [ fhir:v "National unique individual identifier" ] ] ) ; fhir:text [ fhir:v "IHI" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/ihi/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003608000228445" ] ] ] ; # fhir:effective [ fhir:v "2021-02-15T12:00:00+10:00"^^xsd:dateTime] ; # fhir:performer ( [ fhir:reference [ fhir:v "urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860" ] ] ) ; # fhir:value [ a fhir:CodeableConcept ; ( fhir:coding [ a sct:260415000 ; fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ; fhir:code [ fhir:v "260415000" ] ; fhir:display [ fhir:v "Not detected" ] ] ) ; fhir:text [ fhir:v "Not detected" ] ] ; # fhir:note ( [ fhir:text [ fhir:v "Doomben Pathology QLD NATA/RCPA accreditation does not cover the SARS-CoV-2 (COVID-19) PCR test." ] ] [ fhir:text [ fhir:v "This test is currently under evaluation and has not been fully validated. Failure to detect organism-specific nucleic acids does not exclude the presence of disease due to this agent." ] ] ) ; # fhir:specimen [ fhir:reference [ fhir:v "urn:uuid:093f1be9-157d-4602-aa31-f8b658036893" ] ] . # <urn:uuid:093f1be9-157d-4602-aa31-f8b658036893> a fhir:Specimen ; fhir:id [ fhir:v "naso-swab-01"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><a name=\"Specimen_naso-swab-01\"> </a><p class=\"res-header-id\"><b>Generated Narrative: Specimen naso-swab-01</b></p><a name=\"naso-swab-01\"> </a><a name=\"hcnaso-swab-01\"> </a><a name=\"naso-swab-01-en-AU\"> </a><p><b>type</b>: <span title=\"Codes:{http://snomed.info/sct 257261003}\">Swab</span></p><p><b>subject</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-bccc1479-bcd8-4478-a433-b271576003e3\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td><td><b>BodySite</b></td></tr><tr><td style=\"display: none\">*</td><td>2021-02-15 12:00:00+1000</td><td><span title=\"Codes:{http://snomed.info/sct 71836000}\">Nasopharyngeal</span></td></tr></table><p><b>note</b>: Collection Setting COVID HSC Assessment Clinic</p></div>" ] ; # fhir:type [ ( fhir:coding [ a sct:257261003 ; fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ; fhir:code [ fhir:v "257261003" ] ; fhir:display [ fhir:v "Swab" ] ] ) ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3" ] ; fhir:identifier [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NI" ] ; fhir:display [ fhir:v "National unique individual identifier" ] ] ) ; fhir:text [ fhir:v "IHI" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/ihi/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003608000228445" ] ] ] ; # fhir:collection [ fhir:collected [ fhir:v "2021-02-15T12:00:00+10:00"^^xsd:dateTime ] ; fhir:bodySite [ ( fhir:coding [ a sct:71836000 ; fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ; fhir:code [ fhir:v "71836000" ] ; fhir:display [ fhir:v "Nasopharyngeal structure" ] ] ) ; fhir:text [ fhir:v "Nasopharyngeal" ] ] ] ; # fhir:note ( [ fhir:text [ fhir:v "Collection Setting COVID HSC Assessment Clinic" ] ] ) . # <urn:uuid:dbd0afa4-8c3a-48cd-9fc9-72cf2f06adae> a fhir:ServiceRequest ; fhir:id [ fhir:v "order-covid-01"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><a name=\"ServiceRequest_order-covid-01\"> </a><p class=\"res-header-id\"><b>Generated Narrative: ServiceRequest order-covid-01</b></p><a name=\"order-covid-01\"> </a><a name=\"hcorder-covid-01\"> </a><a name=\"order-covid-01-en-AU\"> </a><p><b>identifier</b>: Placer Identifier/123451</p><p><b>status</b>: Completed</p><p><b>intent</b>: Order</p><p><b>category</b>: <span title=\"Codes:{http://snomed.info/sct 310074003}\">Pathology service</span>, <span title=\"Codes:{http://terminology.hl7.org/CodeSystem/v2-0074 MB}\">Microbiology</span></p><p><b>code</b>: <span title=\"Codes:\">2019-Novel Coronavirus PCR</span></p><p><b>subject</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-bccc1479-bcd8-4478-a433-b271576003e3\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p><p><b>requester</b>: Dr Greg Algregster (Algregster Medical Center QLD)</p></div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "PLAC" ] ; fhir:display [ fhir:v "Placer Identifier" ] ] ) ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hpio-scoped/order/1.0/8003626566699742"^^xsd:anyURI ] ; fhir:value [ fhir:v "123451" ] ] ) ; # fhir:status [ fhir:v "completed"] ; # fhir:intent [ fhir:v "order"] ; # fhir:category ( [ ( fhir:coding [ a sct:310074003 ; fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ; fhir:code [ fhir:v "310074003" ] ; fhir:display [ fhir:v "Pathology service" ] ] ) ] [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0074"^^xsd:anyURI ] ; fhir:code [ fhir:v "MB" ] ] ) ] ) ; # fhir:code [ fhir:text [ fhir:v "2019-Novel Coronavirus PCR" ] ] ; # fhir:subject [ fhir:reference [ fhir:v "urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3" ] ; fhir:identifier [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NI" ] ; fhir:display [ fhir:v "National unique individual identifier" ] ] ) ; fhir:text [ fhir:v "IHI" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/ihi/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003608000228445" ] ] ] ; # fhir:requester [ fhir:display [ fhir:v "Dr Greg Algregster (Algregster Medical Center QLD)" ] ] . # <urn:uuid:bccc1479-bcd8-4478-a433-b271576003e3> a fhir:Patient ; fhir:id [ fhir:v "mhr-anne-thompson"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><a name=\"Patient_mhr-anne-thompson\"> </a><p class=\"res-header-id\"><b>Generated Narrative: Patient mhr-anne-thompson</b></p><a name=\"mhr-anne-thompson\"> </a><a name=\"hcmhr-anne-thompson\"> </a><a name=\"mhr-anne-thompson-en-AU\"> </a><p style=\"border: 1px #661aff solid; background-color: #e6e6ff; padding: 10px;\">Mrs. Anne Thompson(official) Female, DoB: 1978-10-11 ( IHI: AustalianIHI#8003608000228445)</p><hr/><table class=\"grid\"><tr><td style=\"background-color: #f3f5da\" title=\"Other Id (see the one above)\">Other Id:</td><td colspan=\"3\">Medical record number/123456</td></tr><tr><td style=\"background-color: #f3f5da\" title=\"Language spoken\">Language:</td><td colspan=\"3\"><span title=\"Codes:{urn:ietf:bcp:47 yub}\">Yugambal</span></td></tr><tr><td style=\"background-color: #f3f5da\" title=\"This extension applies to the Patient, Person, and RelatedPerson resources and is used to indicate whether a person identifies as being of Aboriginal or Torres Strait Islander origin.\"><a href=\"https://build.fhir.org/ig/hl7au/au-fhir-base/StructureDefinition-indigenous-status.html\">Australian Indigenous Status</a></td><td colspan=\"3\">australian-indigenous-status-1 1: Aboriginal but not Torres Strait Islander origin</td></tr></table></div>" ] ; # fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org.au/fhir/StructureDefinition/indigenous-status"^^xsd:anyURI ] ; fhir:value [ a fhir:Coding ; fhir:system [ fhir:v "https://healthterminologies.gov.au/fhir/CodeSystem/australian-indigenous-status-1"^^xsd:anyURI ] ; fhir:code [ fhir:v "1" ] ; fhir:display [ fhir:v "Aboriginal but not Torres Strait Islander origin" ] ] ] ) ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NI" ] ] ) ; fhir:text [ fhir:v "IHI" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/ihi/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003608000228445" ] ] [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "MR" ] ] ) ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hpio-scoped/medicalrecord/1.0/8003621566684455"^^xsd:anyURI ] ; fhir:value [ fhir:v "123456" ] ; fhir:assigner [ fhir:display [ fhir:v "Algregster Medical Center" ] ] ] ) ; # fhir:name ( [ fhir:use [ fhir:v "official" ] ; fhir:text [ fhir:v "Mrs. Anne Thompson" ] ; fhir:family [ fhir:v "Thompson" ] ; ( fhir:given [ fhir:v "Anne" ] ) ; ( fhir:prefix [ fhir:v "Mrs" ] ) ] ) ; # fhir:gender [ fhir:v "female"] ; # fhir:birthDate [ fhir:v "1978-10-11"^^xsd:date] ; # fhir:communication ( [ fhir:language [ ( fhir:coding [ fhir:system [ fhir:v "urn:ietf:bcp:47"^^xsd:anyURI ] ; fhir:code [ fhir:v "yub" ] ] ) ; fhir:text [ fhir:v "Yugambal" ] ] ] ) . # <urn:uuid:0a8c38d1-b44c-4996-ae39-6a1c05a3489c> a fhir:PractitionerRole ; fhir:id [ fhir:v "meyer-adam-microbiologist"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><a name=\"PractitionerRole_meyer-adam-microbiologist\"> </a><p class=\"res-header-id\"><b>Generated Narrative: PractitionerRole meyer-adam-microbiologist</b></p><a name=\"meyer-adam-microbiologist\"> </a><a name=\"hcmeyer-adam-microbiologist\"> </a><a name=\"meyer-adam-microbiologist-en-AU\"> </a><p><b>identifier</b>: HPI-I/8003619900041630</p><p><b>practitioner</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-f4c7c72e-c8fd-40a4-94e2-44e293db0ae2\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p><p><b>organization</b>: <a href=\"Bundle-report-covid-doc-01.html#urn-uuid-b56e2c36-36a7-4907-9751-1fdb438ca860\">Bundle: identifier = UUID:b487469d-810c-40ae-b5a9-c0beb9001c9f; type = document; timestamp = 2022-03-17 11:46:00+1000</a></p><p><b>code</b>: <span title=\"Codes:{http://snomed.info/sct 159138004}\">Microbiologist</span></p><p><b>telecom</b>: ph: (07) 7010 3453(Work)</p></div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NPI" ] ; fhir:display [ fhir:v "National provider identifier" ] ] ) ; fhir:text [ fhir:v "HPI-I" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/hpii/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003619900041630" ] ] ) ; # fhir:practitioner [ fhir:reference [ fhir:v "urn:uuid:f4c7c72e-c8fd-40a4-94e2-44e293db0ae2" ] ] ; # fhir:organization [ fhir:reference [ fhir:v "urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860" ] ] ; # fhir:code ( [ ( fhir:coding [ a sct:159138004 ; fhir:system [ fhir:v "http://snomed.info/sct"^^xsd:anyURI ] ; fhir:code [ fhir:v "159138004" ] ] ) ; fhir:text [ fhir:v "Microbiologist" ] ] ) ; # fhir:telecom ( [ fhir:system [ fhir:v "phone" ] ; fhir:value [ fhir:v "(07) 7010 3453" ] ; fhir:use [ fhir:v "work" ] ] ) . # <urn:uuid:f4c7c72e-c8fd-40a4-94e2-44e293db0ae2> a fhir:Practitioner ; fhir:id [ fhir:v "f4c7c72e-c8fd-40a4-94e2-44e293db0ae2"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><a name=\"Practitioner_f4c7c72e-c8fd-40a4-94e2-44e293db0ae2\"> </a><p class=\"res-header-id\"><b>Generated Narrative: Practitioner f4c7c72e-c8fd-40a4-94e2-44e293db0ae2</b></p><a name=\"f4c7c72e-c8fd-40a4-94e2-44e293db0ae2\"> </a><a name=\"hcf4c7c72e-c8fd-40a4-94e2-44e293db0ae2\"> </a><a name=\"f4c7c72e-c8fd-40a4-94e2-44e293db0ae2-en-AU\"> </a><p><b>name</b>: Adam MEYER </p><p><b>address</b>: 75 Hampden St DOOMBEN QLD 4007 AU (work)</p></div>" ] ; # fhir:name ( [ fhir:family [ fhir:v "MEYER" ] ; ( fhir:given [ fhir:v "Adam" ] ) ; ( fhir:prefix [ fhir:v "Dr." ] ) ] ) ; # fhir:address ( [ fhir:use [ fhir:v "work" ] ; ( fhir:line [ fhir:v "75 Hampden St" ] ) ; fhir:city [ fhir:v "DOOMBEN" ] ; fhir:state [ fhir:v "QLD" ] ; fhir:postalCode [ fhir:v "4007" ] ; fhir:country [ fhir:v "AU" ] ] ) . # <urn:uuid:b56e2c36-36a7-4907-9751-1fdb438ca860> a fhir:Organization ; fhir:id [ fhir:v "b56e2c36-36a7-4907-9751-1fdb438ca860"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><a name=\"Organization_b56e2c36-36a7-4907-9751-1fdb438ca860\"> </a><p class=\"res-header-id\"><b>Generated Narrative: Organization b56e2c36-36a7-4907-9751-1fdb438ca860</b></p><a name=\"b56e2c36-36a7-4907-9751-1fdb438ca860\"> </a><a name=\"hcb56e2c36-36a7-4907-9751-1fdb438ca860\"> </a><a name=\"b56e2c36-36a7-4907-9751-1fdb438ca860-en-AU\"> </a><p><b>identifier</b>: HPI-O/8003623233366565, NATA Accreditation Number/100101</p><p><b>name</b>: Doomben Pathology QLD</p><p><b>telecom</b>: <a href=\"mailto:info@doombenpathlabs.example.com\">info@doombenpathlabs.example.com</a>, ph: (07) 5550 3427(Work)</p><p><b>address</b>: 75 Hampden St DOOMBEN QLD 4007 AU (work)</p></div>" ] ; # fhir:identifier ( [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org.au/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NOI" ] ] ) ; fhir:text [ fhir:v "HPI-O" ] ] ; fhir:system [ fhir:v "http://ns.electronichealth.net.au/id/hi/hpio/1.0"^^xsd:anyURI ] ; fhir:value [ fhir:v "8003623233366565" ] ] [ fhir:type [ ( fhir:coding [ fhir:system [ fhir:v "http://terminology.hl7.org.au/CodeSystem/v2-0203"^^xsd:anyURI ] ; fhir:code [ fhir:v "NATAA" ] ; fhir:display [ fhir:v "NATA Accreditation Number" ] ] ) ; fhir:text [ fhir:v "NATA Accreditation Number" ] ] ; fhir:system [ fhir:v "http://hl7.org.au/id/nata-accreditation"^^xsd:anyURI ] ; fhir:value [ fhir:v "100101" ] # In Australia NATA numbers are an\n incremental number that have been incremented to 5 digits, this example uses a fictional\n NATA number from 100,000 + to ensure no conflict with real world values ] ) ; # fhir:name [ fhir:v "Doomben Pathology QLD"] ; # fhir:telecom ( [ fhir:system [ fhir:v "email" ] ; fhir:value [ fhir:v "info@doombenpathlabs.example.com" ] ; fhir:use [ fhir:v "work" ] ] [ fhir:system [ fhir:v "phone" ] ; fhir:value [ fhir:v "(07) 5550 3427" ] ; fhir:use [ fhir:v "work" ] ] ) ; # fhir:address ( [ fhir:use [ fhir:v "work" ] ; fhir:type [ fhir:v "physical" ] ; ( fhir:line [ fhir:v "75 Hampden St" ] ) ; fhir:city [ fhir:v "DOOMBEN" ] ; fhir:state [ fhir:v "QLD" ] ; fhir:postalCode [ fhir:v "4007" ] ; fhir:country [ fhir:v "AU" ] ] ) . #
IG © 2023+ Australian Digital Health Agency. Package au.digitalhealth.r4#1.2.0-ci-build based on FHIR 4.0.1. Generated 2024-09-12
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Australian Digital Health Agency
ABN 84 425 496 912, Level 25, 175 Liverpool Street, Sydney, NSW 2000
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